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Aliases for TPI1P2 Gene

Aliases for TPI1P2 Gene

  • Triosephosphate Isomerase 1 Pseudogene 2 2 3 5

External Ids for TPI1P2 Gene

Previous GeneCards Identifiers for TPI1P2 Gene

  • GC07P128695
  • GC07P123056

Summaries for TPI1P2 Gene

GeneCards Summary for TPI1P2 Gene

TPI1P2 (Triosephosphate Isomerase 1 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPI1P2 Gene

Genomics for TPI1P2 Gene

Regulatory Elements for TPI1P2 Gene

Enhancers for TPI1P2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TPI1P2 on UCSC Golden Path with GeneCards custom track

Promoters for TPI1P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TPI1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPI1P2 Gene

Chromosome:
7
Start:
129,055,223 bp from pter
End:
129,057,239 bp from pter
Size:
2,017 bases
Orientation:
Plus strand

Genomic View for TPI1P2 Gene

Genes around TPI1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPI1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPI1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPI1P2 Gene

Proteins for TPI1P2 Gene

Post-translational modifications for TPI1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPI1P2 Gene

Domains & Families for TPI1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPI1P2 Gene

Function for TPI1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPI1P2 Gene

Localization for TPI1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPI1P2 Gene

Pathways & Interactions for TPI1P2 Gene

SuperPathways for TPI1P2 Gene

No Data Available

Interacting Proteins for TPI1P2 Gene

Gene Ontology (GO) - Biological Process for TPI1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPI1P2 Gene

Drugs & Compounds for TPI1P2 Gene

No Compound Related Data Available

Transcripts for TPI1P2 Gene

mRNA/cDNA for TPI1P2 Gene

(3) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPI1P2 Gene

Triosephosphate isomerase 1 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPI1P2 Gene

No ASD Table

Relevant External Links for TPI1P2 Gene

GeneLoc Exon Structure for
TPI1P2
ECgene alternative splicing isoforms for
TPI1P2

Expression for TPI1P2 Gene

mRNA expression in normal human tissues for TPI1P2 Gene

mRNA differential expression in normal tissues according to GTEx for TPI1P2 Gene

This gene is overexpressed in Testis (x10.8).

SOURCE GeneReport for Unigene cluster for TPI1P2 Gene Hs.369665

genes like me logo Genes that share expression patterns with TPI1P2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TPI1P2 Gene

Orthologs for TPI1P2 Gene

Evolution for TPI1P2 Gene

ENSEMBL:
Gene Tree for TPI1P2 (if available)
TreeFam:
Gene Tree for TPI1P2 (if available)

No data available for Orthologs for TPI1P2 Gene

Paralogs for TPI1P2 Gene

No data available for Paralogs for TPI1P2 Gene

Variants for TPI1P2 Gene

Sequence variations from dbSNP and Humsavar for TPI1P2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1055802 -- 129,057,409(+) ACAAC(A/T)TGATG downstream-variant-500B
rs141026218 -- 129,057,232(+) AAAAA(C/T)GCATT nc-transcript-variant
rs11766016 -- 129,057,643(+) aaaaa(A/C)aaatg downstream-variant-500B
rs189143839 -- 129,057,638(+) TCTAC(A/C)AAAAA downstream-variant-500B
rs181420219 -- 129,057,462(+) AAAAA(G/T)AAACT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for TPI1P2 Gene

Variant ID Type Subtype PubMed ID
nsv507416 CNV Insertion 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TPI1P2 Gene

Disorders for TPI1P2 Gene

Relevant External Links for TPI1P2

Genetic Association Database (GAD)
TPI1P2
Human Genome Epidemiology (HuGE) Navigator
TPI1P2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TPI1P2

No disorders were found for TPI1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPI1P2 Gene

Publications for TPI1P2 Gene

  1. An approach based on a genome-wide association study reveals candidate loci for narcolepsy. (PMID: 20677014) Shimada M. … Tokunaga K. (Hum. Genet. 2010) 3 48 67
  2. A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. (PMID: 23740937) Martin J.E. … Martin J. (Hum. Mol. Genet. 2013) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  5. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3

Products for TPI1P2 Gene

Sources for TPI1P2 Gene

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