Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TPI1P2 Gene

Aliases for TPI1P2 Gene

  • Triosephosphate Isomerase 1 Pseudogene 2 2 3

External Ids for TPI1P2 Gene

Summaries for TPI1P2 Gene

GeneCards Summary for TPI1P2 Gene

TPI1P2 (Triosephosphate Isomerase 1 Pseudogene 2) is a Pseudogene. Diseases associated with TPI1P2 include narcolepsy.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPI1P2 Gene

Genomics for TPI1P2 Gene

Genomic Location for TPI1P2 Gene

Start:
129,055,223 bp from pter
End:
129,057,239 bp from pter
Size:
2,017 bases
Orientation:
Plus strand

Genomic View for TPI1P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TPI1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPI1P2 Gene

No data available for Regulatory Elements for TPI1P2 Gene

Proteins for TPI1P2 Gene

Post-translational modifications for TPI1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPI1P2 Gene

Domains for TPI1P2 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for TPI1P2 Gene

Function for TPI1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TPI1P2 Gene

Localization for TPI1P2 Gene

No data available for Gene Ontology (GO) - Cellular Components for TPI1P2 Gene

Pathways for TPI1P2 Gene

SuperPathways for TPI1P2 Gene

No Data Available

Interacting Proteins for TPI1P2 Gene

Gene Ontology (GO) - Biological Process for TPI1P2 Gene

None

No data available for Pathways by source for TPI1P2 Gene

Transcripts for TPI1P2 Gene

mRNA/cDNA for TPI1P2 Gene

(3) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPI1P2 Gene

Triosephosphate isomerase 1 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPI1P2 Gene

No ASD Table

Relevant External Links for TPI1P2 Gene

GeneLoc Exon Structure for
TPI1P2
ECgene alternative splicing isoforms for
TPI1P2

Expression for TPI1P2 Gene

mRNA expression in normal human tissues for TPI1P2 Gene

mRNA differential expression in normal tissues according to GTEx for TPI1P2 Gene

This gene is overexpressed in Testis (10.8).

SOURCE GeneReport for Unigene cluster for TPI1P2 Gene Hs.369665

genes like me logo Genes that share expressions with TPI1P2: view

Orthologs for TPI1P2 Gene

Evolution for TPI1P2 Gene

ENSEMBL:
Gene Tree for TPI1P2 (if available)
TreeFam:
Gene Tree for TPI1P2 (if available)

No data available for Orthologs for TPI1P2 Gene

Paralogs for TPI1P2 Gene

No data available for Paralogs for TPI1P2 Gene

Variants for TPI1P2 Gene

Sequence variations from dbSNP and Humsavar for TPI1P2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1055802 -- 129,057,409(+) ACAAC(A/T)TGATG downstream-variant-500B
rs11766016 -- 129,057,643(+) aaaaa(A/C)aaatg downstream-variant-500B
rs141026218 -- 129,057,232(+) AAAAA(C/T)GCATT nc-transcript-variant
rs181420219 -- 129,057,462(+) AAAAA(G/T)AAACT downstream-variant-500B
rs185951152 -- 129,057,613(+) CTGGG(C/T)AATGA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for TPI1P2 Gene

Variant ID Type Subtype PubMed ID
nsv507416 CNV Insertion 20534489

Relevant External Links for TPI1P2 Gene

HapMap Linkage Disequilibrium report
TPI1P2

Disorders for TPI1P2 Gene

(1) MalaCards Diseases for TPI1P2 Gene

Search for TPI1P2 Gene in MalaCards »

Relevant External Links for TPI1P2

Genetic Association Database (GAD)
TPI1P2
Human Genome Epidemiology (HuGE) Navigator
TPI1P2
genes like me logo Genes that share disorders with TPI1P2: view

No data available for UniProtKB/Swiss-Prot for TPI1P2 Gene

Publications for TPI1P2 Gene

  1. An approach based on a genome-wide association study reveals candidate loci for narcolepsy. (PMID: 20677014) Shimada M. … Tokunaga K. (Hum. Genet. 2010) 3 49
  2. A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. (PMID: 23740937) Martin J.E. … Martin J. (Hum. Mol. Genet. 2013) 3
  3. Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PMID: 17362836) Schymick J.C. … Traynor B.J. (Lancet Neurol 2007) 49
  4. Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci. (PMID: 18204446) Harley J.B. … Kelly J.A. (Nat. Genet. 2008) 49
  5. Characterization of the functional gene and several processed pseudogenes in the human triosephosphate isomerase gene family. (PMID: 4022011) Brown J.R. … Maquat L.E. (Mol. Cell. Biol. 1985) 3

Products for TPI1P2 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate TPI1P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TPI1P2
    • Block miRNA regulation of TPI1P2 using miScript Target Protectors

    Sources for TPI1P2 Gene

    Back to Top

    Content