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Aliases for TP53TG1 Gene

Subcategory (RNA class) for TP53TG1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TP53TG1 Gene

  • TP53 Target 1 (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 96 2 3
  • TP53 Activated Protein 1 2 3
  • TP53 Target Gene 1 2 3
  • TP53AP1 3 4
  • P53TG1 3 4
  • Tumor Protein P53-Activated Protein 1 4
  • TP53-Inducible Gene 1 Protein 4
  • H_RG012D21.9 3
  • NCRNA00096 3
  • LINC00096 3
  • P53TG1-D 3

External Ids for TP53TG1 Gene

Previous HGNC Symbols for TP53TG1 Gene

  • TP53AP1

Previous GeneCards Identifiers for TP53TG1 Gene

  • GC07M085489
  • GC07U902535
  • GC07M086792
  • GC07M086954
  • GC07M081565

Summaries for TP53TG1 Gene

GeneCards Summary for TP53TG1 Gene

TP53TG1 (TP53 Target 1 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TP53TG1 Gene

Genomics for TP53TG1 Gene

Regulatory Elements for TP53TG1 Gene

Enhancers for TP53TG1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TP53TG1 on UCSC Golden Path with GeneCards custom track

Promoters for TP53TG1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TP53TG1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TP53TG1 Gene

Chromosome:
7
Start:
87,325,225 bp from pter
End:
87,345,515 bp from pter
Size:
20,291 bases
Orientation:
Minus strand

Genomic View for TP53TG1 Gene

Genes around TP53TG1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TP53TG1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TP53TG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TP53TG1 Gene

Proteins for TP53TG1 Gene

  • Protein details for TP53TG1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y2A0-T53G1_HUMAN
    Recommended name:
    TP53-target gene 1 protein
    Protein Accession:
    Q9Y2A0
    Secondary Accessions:
    • D6W5P2
    • Q52MB0
    • Q9Y2A1
    • Q9Y2A2
    • Q9Y2A3

    Protein attributes for TP53TG1 Gene

    Size:
    90 amino acids
    Molecular mass:
    10275 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TP53TG1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TP53TG1 Gene

Proteomics data for TP53TG1 Gene at MOPED

Post-translational modifications for TP53TG1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TP53TG1 Gene

Domains & Families for TP53TG1 Gene

Gene Families for TP53TG1 Gene

Protein Domains for TP53TG1 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TP53TG1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TP53TG1: view

No data available for UniProtKB/Swiss-Prot for TP53TG1 Gene

Function for TP53TG1 Gene

Molecular function for TP53TG1 Gene

UniProtKB/Swiss-Prot Induction:
Up-regulated by UV irradiation and exposure to bleomycin or cisplatin in a p53/TP53-dependent manner.

Phenotypes for TP53TG1 Gene

GenomeRNAi human phenotypes for TP53TG1:
genes like me logo Genes that share phenotypes with TP53TG1: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TP53TG1 Gene

Localization for TP53TG1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TP53TG1 Gene

Pathways & Interactions for TP53TG1 Gene

SuperPathways for TP53TG1 Gene

No Data Available

Interacting Proteins for TP53TG1 Gene

Selected Interacting proteins: Q9Y2A0-T53G1_HUMAN for TP53TG1 Gene via I2D MINT

Gene Ontology (GO) - Biological Process for TP53TG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006950 response to stress TAS 9713990
genes like me logo Genes that share ontologies with TP53TG1: view

No data available for Pathways by source and SIGNOR curated interactions for TP53TG1 Gene

Drugs & Compounds for TP53TG1 Gene

No Compound Related Data Available

Transcripts for TP53TG1 Gene

Unigene Clusters for TP53TG1 Gene

TP53 target 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TP53TG1 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2
SP1: -
SP2:
SP3: - -
SP4: -

Relevant External Links for TP53TG1 Gene

GeneLoc Exon Structure for
TP53TG1
ECgene alternative splicing isoforms for
TP53TG1

Expression for TP53TG1 Gene

mRNA expression in normal human tissues for TP53TG1 Gene

SOURCE GeneReport for Unigene cluster for TP53TG1 Gene Hs.274329

mRNA Expression by UniProt/SwissProt for TP53TG1 Gene

Q9Y2A0-T53G1_HUMAN
Tissue specificity: Isoform 1, isoform 2, isoform 3 and isoform 4 are ubiquitously expressed.
genes like me logo Genes that share expression patterns with TP53TG1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for TP53TG1 Gene

Orthologs for TP53TG1 Gene

Evolution for TP53TG1 Gene

ENSEMBL:
Gene Tree for TP53TG1 (if available)
TreeFam:
Gene Tree for TP53TG1 (if available)

No data available for Orthologs for TP53TG1 Gene

Paralogs for TP53TG1 Gene

No data available for Paralogs for TP53TG1 Gene

Variants for TP53TG1 Gene

Sequence variations from dbSNP and Humsavar for TP53TG1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs802031 -- 87,332,046(+) gtctc(C/T)gacgt intron-variant
rs802032 -- 87,333,934(+) tagga(A/G)tggaa intron-variant
rs802033 -- 87,334,896(+) atgta(C/T)gatat intron-variant
rs802034 -- 87,336,726(+) TTATA(A/G)TAACT intron-variant
rs802035 -- 87,340,243(+) CTCAT(C/T)TGGAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TP53TG1 Gene

Variant ID Type Subtype PubMed ID
nsv888677 CNV Gain 21882294
nsv464622 CNV Gain 19166990
nsv428177 CNV Loss 18775914
nsv888678 CNV Loss 21882294
esv272256 CNV Insertion 20981092
esv269158 CNV Insertion 20981092

Relevant External Links for TP53TG1 Gene

HapMap Linkage Disequilibrium report
TP53TG1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TP53TG1 Gene

Disorders for TP53TG1 Gene

Relevant External Links for TP53TG1

Genetic Association Database (GAD)
TP53TG1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TP53TG1

No disorders were found for TP53TG1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TP53TG1 Gene

Publications for TP53TG1 Gene

  1. Isolation of a novel TP53 target gene from a colon cancer cell line carrying a highly regulated wild-type TP53 expression system. (PMID: 9713990) Takei Y. … Nakamura Y. (Genes Chromosomes Cancer 1998) 2 3 4 67
  2. Analysis of functional variants reveals new candidate genes associated with alexithymia. (PMID: 25882097) Mezzavilla M. … Robino A. (Psychiatry Res 2015) 3
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  4. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for TP53TG1 Gene

Sources for TP53TG1 Gene

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