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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TOLLIP Gene

protein-coding   GIFtS: 61
GCID: GC11M001295

toll interacting protein

 Explore 27 diseases affiliated with
TOLLIP via our new
 Human Malady Compendium 
Biological research products
for TOLLIP
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Toll Interacting Protein1 2
IL-1RAcPIP1 2
Adapter Protein2
Toll-Interacting Protein2

External Ids:    HGNC: 164761   Entrez Gene: 544722   Ensembl: ENSG000000789027   OMIM: 6062775   UniProtKB: Q9H0E23   

Export aliases for TOLLIP gene to outside databases

Previous GC identifers: GC11M001759 GC11M001558 GC11M001261 GC11M001262 GC11M001252 GC11M001087


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TOLLIP:
This gene encodes a ubiquitin-binding protein that interacts with several Toll-like receptor (TLR) signaling cascade
components. The encoded protein regulates inflammatory signaling and is involved in interleukin-1 receptor trafficking
and in the turnover of IL1R-associated kinase. (provided by RefSeq, Aug 2011)

UniProtKB/Swiss-Prot: TOLIP_HUMAN, Q9H0E2
Function: Component of the signaling pathway of IL-1 and Toll-like receptors. Inhibits cell activation by microbial
products. Recruits IRAK1 to the IL-1 receptor complex. Inhibits IRAK1 phosphorylation and kinase activity

Gene Wiki entry for TOLLIP


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_009237.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TOLLIP gene promoter:
         AhR   Elk-1   STAT1   Sp1   ATF-2   FOXD1   AP-4   ATF   GATA-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTOLLIP promoter sequence
   Search SABiosciences Chromatin IP Primers for TOLLIP

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TOLLIP


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11p15.5   Ensembl cytogenetic band:  11p15.5   HGNC cytogenetic band: 11p

TOLLIP Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TOLLIP gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11M001295:  view genomic region     (about GC identifiers)

Start:
1,295,598 bp from pter      End:
1,330,892 bp from pter
Size:
35,295 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TOLIP_HUMAN, Q9H0E2 (See protein sequence)
Recommended Name: Toll-interacting protein  
Size: 274 amino acids; 30282 Da
Subunit: Oligomerizes. Binds to TLR2 and the TLR4-MD2 complex via its C-terminus. Exists as complex with IRAK1 in
unstimulated cells. Upon IL-1 signaling, Tollip binds to the activated IL-1 receptor complex containing IL-1RI,
IL-1RacP and the adapter protein MyD88, where it interacts with the TIR domain of IL-1RacP. MyD88 then triggers IRAK1
autophosphorylation, which in turn leads to the dissociation of IRAK1 from Tollip and IL-1RAcP. Interacts with TOM1L2
Subcellular location: Cytoplasm (Probable)
Sequence caution: Sequence=BAB14283.1; Type=Erroneous initiation;
1 PDB 3D structure from and Proteopedia for TOLLIP:
1WGL (3D)    
Secondary accessions: Q9H9E6 Q9UJ69

Explore the universe of human proteins at neXtProt for TOLLIP: NX_Q9H0E2

Post-translational modifications:

  • Phosphorylated by IRAK1 upon stimulation by IL-1 or microbial products1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9H0E2

  • TOLLIP Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_061882.2  
    ENSEMBL proteins: 
     ENSP00000314733   ENSP00000434035   ENSP00000432668   ENSP00000263646   ENSP00000436393  
     ENSP00000432778   ENSP00000434494   ENSP00000437404  
    Reactome Protein details: Q9H0E2
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: TOLLIP
    OriGene Protein Over-expression Lysate: TOLLIP
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    Novus Biologicals TOLLIP Proteins
    Novus Biologicals TOLLIP Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for TOLLIP
    Uscn Proteins for TOLLIP

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005737cytoplasm IC11441107
    GO:0005829cytosol TAS--
    GO:0016604nuclear body IEA--
    GO:0045092interleukin-18 receptor complex NAS10854325


    TOLLIP for ontologies           About GeneDecksing



    TOLLIP Antibody Products: 
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    ThermoFisher Antibody for TOLLIP

    Assay Products for TOLLIP: 
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    Browse OriGene Fluorogenic Cell Assay Kits
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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TOLLIP


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TOLLIP for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR008973 C2_Ca/lipid-bd_dom_CaLB
     IPR003892 CUE
     IPR000008 C2_Ca-dep
     IPR009060 UBA-like

    Graphical View of Domain Structure for InterPro Entry Q9H0E2

    ProtoNet protein and cluster: Q9H0E2

    2 Blocks protein families:
    IPB000008 C2 domain
    IPB003892 Ubiquitin system component Cue


    UniProtKB/Swiss-Prot: TOLIP_HUMAN, Q9H0E2
    Similarity: Belongs to the tollip family
    Similarity: Contains 1 C2 domain
    Similarity: Contains 1 CUE domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TOLIP_HUMAN, Q9H0E2
    Function: Component of the signaling pathway of IL-1 and Toll-like receptors. Inhibits cell activation by microbial
    products. Recruits IRAK1 to the IL-1 receptor complex. Inhibits IRAK1 phosphorylation and kinase activity

    miRNA
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    OriGene 3'-UTR Clone: TOLLIP
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TOLLIP
    8/30 QIAGEN miScript miRNA Assays for microRNAs that regulate TOLLIP (see all 30):
    hsa-miR-548j hsa-miR-548i hsa-miR-106a hsa-miR-138-2* hsa-miR-519a hsa-miR-378b hsa-miR-93 hsa-miR-548d-5p
    SwitchGear 3'UTR luciferase reporter plasmidTOLLIP 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TOLLIP (see all 7)
    OriGene shRNA RFP: TOLLIP
    OriGene siRNA: TOLLIP
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TOLLIP

    Gene Editing
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    Clone
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    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: TOLLIP (NM_019009)
    Browse Sino Biological Human cDNA Clones
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TOLLIP 

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TOLLIP

    Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004871signal transducer activity NAS11441107
    GO:0005150interleukin-1, Type I receptor binding IEA--
    GO:0005515protein binding IPI--
    GO:0019900kinase binding IPI10854325
    GO:0031624ubiquitin conjugating enzyme binding IEA--


    TOLLIP for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for TOLLIP:
     Increased HPV18 LCR reporter a  Low eccentricity cells  Synthetic lethal with c-Myc af 

    Animal Models:
         Mouse knock-out Tolliptm1Kbns for TOLLIP
         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Tollip):
     homeostasis/metabolism  immune system 

    TOLLIP for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Immune response_IL-1 signaling pathway
    Immune response_IL-1 signaling pathway1.00
    Immune response IL-1 signaling pathway0.98
    2Interleukin-1 signaling
    Interleukin-1 signaling1.00
    IL1-mediated signaling events0.39
    3Transcription NF-kB signaling pathway
    Transcription NF-kB signaling pathway1.00
    Transcription_NF-kB signaling pathway0.85
    4Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response
    Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response1.00
    Immune response_TLR signaling pathways0.94
    5TRAF Pathway
    TRAF Pathway1.00
    Toll-Like Receptors Pathway0.41

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    3 EMD Millipore Pathways for TOLLIP
        Transcription NF-kB signaling pathway
    Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response
    Immune response IL-1 signaling pathway

    5 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for TOLLIP
        NF-KappaB (p50-p65) Pathway
    Toll-Like Receptors Pathway
    TRAF Pathway
    IL-1 Pathway
    NF-KappaB Family Pathway

    1 Cell Signaling Technology (CST) Pathway for TOLLIP
        NF-kappaB Signaling

    4 GeneGo (Thomson Reuters) Pathways for TOLLIP
        Transcription NF-kB signaling pathway
    Immune response TLR signaling pathways
    IL-1 beta-dependent CFTR expression
    Immune response IL-1 signaling pathway

    3 BioSystems Pathways for TOLLIP 
        Apoptosis Modulation and Signaling
    Toll-like receptor signaling pathway
    IL1-mediated signaling events

    5        Reactome Pathways for TOLLIP
        IRAK2 is phosphorylated downstream of IRAK4 following IL1 receptor activation
    Interleukin-1 signaling
    Cytokine Signaling in Immune system
    Signaling by Interleukins
    Immune System


    1         Kegg Pathway  (Kegg details for TOLLIP):
        Toll-like receptor signaling pathway


    TOLLIP for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TOLLIP

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/95 Interacting proteins for TOLLIP (Q9H0E21, 3 ENSP000003147334) via UniProtKB, MINT, STRING, and/or I2D (see all 95)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TOM1L1O756741, 3, ENSP000004089584EBI-74615,EBI-712991 I2D: score=4 STRING: ENSP00000408958
    IRAK2O431871, 3, ENSP000002564584EBI-74615,EBI-447733 I2D: score=1 STRING: ENSP00000256458
    PEG10Q86TG71, 3, ENSP000004175874EBI-74615,EBI-2858265 I2D: score=1 STRING: ENSP00000417587
    WRNIP1Q96S551, 3, ENSP000003701504EBI-74615,EBI-2513471 I2D: score=1 STRING: ENSP00000370150
    DAZAP2Q150381, 3, ENSP000004049684EBI-74615,EBI-724310 I2D: score=3 STRING: ENSP00000404968
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006954inflammatory response NAS10854325
    GO:0007165signal transduction IPI11441107
    GO:0007267cell-cell signaling TAS10854325
    GO:0016310phosphorylation IDA1085432
    GO:0033235positive regulation of protein sumoylation IEA--


    TOLLIP for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TOLLIP for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TOLLIP
    10/30 Novoseek chemical compound relationships for TOLLIP gene (see all 30)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 74.3 79 9678765 (2), 17855441 (2), 9199344 (1), 10026169 (1) (see all 65)
    phosphotyrosine 62.8 7 9482841 (1), 9710592 (1), 9737716 (1), 15737992 (1) (see all 7)
    phosphatidylinositol 3-phosphate 43.9 2 15140579 (1)
    phosphatidylinositol 43.6 9 19330070 (1), 17651088 (1), 7499252 (1), 15202725 (1) (see all 7)
    letrozole 43.3 5 15967659 (1), 17113978 (1), 17611101 (1), 15701882 (1) (see all 5)
    phosphoinositide 37 1 12521378 (1)
    phosphatidylinositol-3,4,5-trisphosphate 36.9 1 16172125 (1)
    ly294002 22.9 1 12621049 (1)
    inositol 22.1 1 9013643 (1)
    threonine 21.7 4 10854325 (1), 17276401 (1), 17625596 (1), 16107720 (1)

    Search CenterWatch for drugs/clinical trials and news about TOLLIP / TOLIP 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TOLLIP gene: 
    NM_019009.3  

    Unigene Cluster for TOLLIP:

    Toll interacting protein
    Hs.368527  [show with all ESTs]
    Unigene Representative Sequence: NM_019009
    14 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000317204(uc001lte.3 uc009ycu.3 uc001ltf.3) ENST00000527886(uc001ltd.3)
    ENST00000525159 ENST00000263646 ENST00000530506 ENST00000527938 ENST00000530541
    ENST00000528719 ENST00000527746 ENST00000527638 ENST00000532551 ENST00000530821
    ENST00000527085 ENST00000542915

    miRNA
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    hsa-miR-548j hsa-miR-548i hsa-miR-106a hsa-miR-138-2* hsa-miR-519a hsa-miR-378b hsa-miR-93 hsa-miR-548d-5p
    SwitchGear 3'UTR luciferase reporter plasmidTOLLIP 3' UTR sequence
    Inhib. RNA
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    GenScript: all cDNA clones in your preferred vector: TOLLIP (NM_019009)
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    Primer
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TOLLIP
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TOLLIP

    Additional cDNA sequence: 

    AB209541.1 AJ242972.1 AK022871.1 AK090850.1 AK096693.1 AK127123.1 AK315592.1 AL136835.1 
    AY730683.1 BC004420.1 BC012057.1 BC018272.1 CR533477.1 

    15 DOTS entries:

    DT.120714802  DT.100793245  DT.444846  DT.100809199  DT.100705767  DT.102842608  DT.100793235  DT.100793236 
    DT.100793239  DT.120714755  DT.120714800  DT.75195364  DT.97846496  DT.100793243  DT.120714773 

    24/305 AceView cDNA sequences (see all 305):

    BQ961826 CF145912 BE795865 AL136835 BC004420 AI278273 AW027877 BE047886 
    BM069752 BX441711 AA363771 AI288458 AA360511 AI686617 BE796029 BM915457 
    AI215164 AW294495 BX366329 CA309889 BE675106 BU195369 AI880708 BI825192 

    GeneLoc Exon Structure

    5/13 Alternative Splicing Database (ASD) splice patterns (SP) for TOLLIP (see all 13)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c ^ 10 ^ 11a · 11b · 11c ^ 12a · 12b · 12c · 12d · 12e ·
    SP1:                          -     -     -                 -     -     -           -                             -     -     -                                 
    SP2:                                                        -     -     -           -                             -     -     -                                 
    SP3:                          -     -     -     -     -     -     -     -           -                             -     -     -                                 
    SP4:                          -     -     -                 -     -     -     -     -                             -     -     -                                 
    SP5:                          -     -     -     -     -     -     -     -           -                                                                           

    ExUns: 12f
    SP1:      
    SP2:      
    SP3:      
    SP4:      
    SP5:      


    ECgene alternative splicing isoforms for TOLLIP

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TOLLIP expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCGTTCTGGA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See TOLLIP Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TOLLIP

    SOURCE GeneReport for Unigene cluster: Hs.368527
        SABiosciences Expression via Pathway-Focused PCR Arrays including TOLLIP (see all 7): 
              Toll-Like Receptor Signaling Pathway in human mouse rat
              PI3K-AKT Signaling Pathway in human mouse rat
              NFKB Signaling Pathway in human mouse rat
              Inflammatory Response & Autoimmunity in human mouse rat
              Huntington's Disease in human mouse rat

    Primer
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TOLLIP gene from 6/19 species (see all 19)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tollip1 , 5 toll interacting protein1, 5 86.08(n)1
    93.04(a)1
      7 (87.34 cM)5
    544731  NM_023764.31  NP_076253.11 
     1418748135 
    chicken
    (Gallus gallus)
    Aves TOLLIP1 toll interacting protein 78.51(n)
    89.38(a)
      423099  NM_001006471.1  NP_001006471.1 
    lizard
    (Anolis carolinensis)
    Reptilia TOLLIP6
    --
    82(a)
    1 ↔ 1
    1(71872887-71891677)
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.88752 Danio rerio mRNA similar to toll interacting protein more 81(n)    BC046009.1 
    mosquito
    (Anopheles gambiae)
    Insecta AgaP_AGAP0036151 AGAP003615-PA 59.45(n)
    52.07(a)
      1274278  XM_562476.2  XP_562476.2 
    worm
    (Caenorhabditis elegans)
    Secernentea F25H2.13
    tli-11
    C2 domain3
    Protein TLI-11
    36(a)3
    49.64(n)1
    44.1(a)1
      I(10543147-10544024)3
    1729361  NM_060356.21  NP_492757.21 


    ENSEMBL Gene Tree for TOLLIP (if available)
    TreeFam Gene Tree for TOLLIP (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/810 NCBI SNPs in TOLLIP are shown (see all 810    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1920638721,2
    --1295304(+) GGGTCA/GTGTTC 1 -- int10--------
    rs57440391,2
    C,F,H,--1295334(-) CCAGGC/ACATTT 1 -- int111Minor allele frequency- A:0.04NA EU NS WA 1008
    rs1420667851,2
    --1295349(+) GAAAAC/GGCACC 1 -- int10--------
    rs1834328391,2
    --1295406(+) CCCACA/GCCCAC 1 -- int10--------
    rs57440381,2
    C,F,--1295436(-) GTCCCA/GGNNNN 1 -- int16Minor allele frequency- G:0.13NA EU WA 334
    rs116071361,2
    C,H--1295522(+) TTGACA/GAGTGA 1 -- int11Minor allele frequency- G:0.00NA 2
    rs1454334181,2
    --1295589(+) CTCGGC/GAACAA 1 -- int10--------
    rs57440371,2
    C,F,--1295596(-) ACCATG/ATTTGT 1 -- spd18Minor allele frequency- A:0.06NA EU WA 338
    rs1875657371,2
    --1295644(+) TATGGA/GTCATT 1 -- ut310--------
    rs1909560351,2
    --1295689(+) TTTACA/TATCAA 1 -- ut310--------

    HapMap Linkage Disequilibrium report for TOLLIP (1295598 - 1330892 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 11 variations for TOLLIP
         5 CNVs: 3831 10344 29887 65837 29888
         6 Indels: 24650 85588 75492 24649 75493 85589

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TOLLIP for disorders           About GeneDecksing

    OMIM gene information: 606277    OMIM disorders: --

    20/27 diseases for TOLLIP (see all 27):    About MalaCards
    lymphoproliferative syndrome    cervical squamous cell carcinoma    squamous cell carcinoma    inflammatory bowel disease
    atopic dermatitis    chronic lymphocytic leukemia    lymphocytic leukemia    down syndrome
    dermatitis    huntington's disease    hepatitis b    breast cancer
    leukemia    pertussis    twinning    cervicitis
    carcinoma    meningioma    melanoma    lung cancer

    10/16 Novoseek disease relationships for TOLLIP gene (see all 16)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    lymphoproliferative syndrome 49.1 3 12242590 (1), 15661030 (1), 12629654 (1)
    x-linked lymphoproliferative syndrome 49 1 16081788 (1)
    necrosis 36.4 16 9620659 (1), 9744859 (1), 10964568 (1), 11784851 (1) (see all 14)
    tumors 30.8 28 15299064 (1), 9620659 (1), 9744859 (1), 10449755 (1) (see all 26)
    myeloid leukemia chronic 19.4 1 19966867 (1)
    breast cancer 9.52 3 17855441 (2), 15322292 (1)
    cancer 0.239 6 16787325 (1), 18620523 (1), 16480678 (1), 18451132 (1) (see all 6)
    nephrotic syndrome 0 1 12217865 (1)
    breast carcinoma 0 1 17218774 (1)
    shock 0 1 18035683 (1)

    Human Genome Epidemiology (HuGE) Navigator: TOLLIP (12 documents)

    Export disorders for TOLLIP gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TOLLIP gene, integrated from 9 sources (see all 342):
    (articles sorted by number of sources associating them with TOLLIP)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Tollip, a new component of the IL-1R1 pathway, links IRAK to the IL-1 receptor. (PubMed id 10854325)1, 2, 3, 9 Burns K.... Volpe F. (2000)
    2. Negative regulation of Toll-like receptor-mediated signaling by Tollip. (PubMed id 11751856)1, 2, 9 Zhang G. and Ghosh S. (2002)
    3. Recruitment of clathrin onto endosomes by the Tom1-Tollip complex. (PubMed id 16412388)1, 2, 9 Katoh Y.... Nakayama K. (2006)
    4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PubMed id 11230166)1, 2 Wiemann S.... Poustka A. (2001)
    7. The IL1 receptor accessory protein is responsible for the recruitment of the interleukin-1 receptor associated kinase to the IL1/IL1 receptor I complex. (PubMed id 9426216)1, 3 Volpe F....Ray K. (1997)
    8. Diversification of TOLLIP isoforms in mouse and man. (PubMed id 19444506)1, 9 Lo Y.L....Wells C.A. (2009)
    9. Down syndrome candidate region-1 protein interacts wi th Tollip and positively modulates interleukin-1 receptor-mediated signaling. (PubMed id 19716405)1, 9 Lee J.Y....Chung K.C. (2009)
    10. Tollip and Tom1 form a complex and recruit ubiquitin-conjugated proteins onto early endosomes. (PubMed id 15047686)1, 9 Katoh Y....Nakayama K. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 54472 HGNC: 16476 AceView: TOLLIP Ensembl:ENSG00000078902 euGenes: HUgn54472
    ECgene: TOLLIP Kegg: 54472 H-InvDB: TOLLIP

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TOLLIP Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TOLLIP gene:
    Search GeneIP for patents involving TOLLIP

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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