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Aliases for TNKS2-AS1 Gene

Subcategory (RNA class) for TNKS2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TNKS2-AS1 Gene

  • TNKS2 Antisense RNA 1 (Head To Head) 2 3 5
  • TNKS2 Antisense RNA 1 2

External Ids for TNKS2-AS1 Gene

Previous GeneCards Identifiers for TNKS2-AS1 Gene

  • GC10M093545

Summaries for TNKS2-AS1 Gene

GeneCards Summary for TNKS2-AS1 Gene

TNKS2-AS1 (TNKS2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TNKS2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TNKS2-AS1 Gene

Genomics for TNKS2-AS1 Gene

GeneHancer (GH) Regulatory Elements for TNKS2-AS1 Gene

Promoters and enhancers for TNKS2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I091795 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 595.3 -0.1 -103 4.8 PKNOX1 MLX ARID4B SIN3A ZNF2 IRF4 YY1 SLC30A9 POLR2B ZNF213 TNKS2-AS1 TNKS2 GC10M091797 PIR42497 HECTD2 SRP9P1
GH10I091883 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 37.5 -87.4 -87422 5.1 HDGF ZFP64 ARID4B SIN3A FEZF1 ZNF2 ZNF48 ZNF121 GLIS2 ZNF143 TNKS2-AS1 TNKS2 BTAF1 NUDT9P1 HECTD2 FGFBP3 ENSG00000273497 GC10M091835
GH10I091629 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 15.2 +166.5 166504 4.7 FOXA2 PKNOX1 CLOCK MLX ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 PPP1R3C TNKS2-AS1 HECTD2 TNKS2 HECTD2-AS1
GH10I091587 Enhancer 1.8 VISTA Ensembl ENCODE dbSUPER 14.7 +207.1 207072 7.3 PKNOX1 SMAD1 FOXA2 SIN3A FEZF1 ZNF766 ZNF548 FOS REST SMARCB1 RPP30 BTAF1 HECTD2 TNKS2-AS1 PPP1R3C TNKS2 HECTD2-AS1 LOC105378433
GH10I091683 Enhancer 0.7 Ensembl ENCODE 30.9 +114.0 114038 1.6 SP1 JUND POLR2A RCOR1 FOS TNKS2-AS1 TNKS2 HECTD2 GAPDHP28 GC10M091739
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TNKS2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TNKS2-AS1 Gene

Genomic Locations for TNKS2-AS1 Gene
15,453 bases
Minus strand

Genomic View for TNKS2-AS1 Gene

Genes around TNKS2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TNKS2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TNKS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TNKS2-AS1 Gene

Proteins for TNKS2-AS1 Gene

Post-translational modifications for TNKS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNKS2-AS1 Gene

Domains & Families for TNKS2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TNKS2-AS1 Gene

Function for TNKS2-AS1 Gene

Phenotypes From GWAS Catalog for TNKS2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TNKS2-AS1 Gene

Localization for TNKS2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TNKS2-AS1 Gene

Pathways & Interactions for TNKS2-AS1 Gene

SuperPathways for TNKS2-AS1 Gene

No Data Available

Interacting Proteins for TNKS2-AS1 Gene

Gene Ontology (GO) - Biological Process for TNKS2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TNKS2-AS1 Gene

Drugs & Compounds for TNKS2-AS1 Gene

No Compound Related Data Available

Transcripts for TNKS2-AS1 Gene

mRNA/cDNA for TNKS2-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TNKS2-AS1 Gene

TNKS2 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TNKS2-AS1 Gene

No ASD Table

Relevant External Links for TNKS2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TNKS2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TNKS2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TNKS2-AS1 Gene

This gene is overexpressed in Testis (x9.3).

SOURCE GeneReport for Unigene cluster for TNKS2-AS1 Gene:

genes like me logo Genes that share expression patterns with TNKS2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TNKS2-AS1 Gene

Orthologs for TNKS2-AS1 Gene

Evolution for TNKS2-AS1 Gene

Gene Tree for TNKS2-AS1 (if available)
Gene Tree for TNKS2-AS1 (if available)

No data available for Orthologs for TNKS2-AS1 Gene

Paralogs for TNKS2-AS1 Gene

No data available for Paralogs for TNKS2-AS1 Gene

Variants for TNKS2-AS1 Gene

Sequence variations from dbSNP and Humsavar for TNKS2-AS1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000306649 -- 91,797,644(-) T/C intron_variant
rs1000383920 -- 91,785,162(-) G/T intron_variant
rs1000643824 -- 91,798,635(-) C/G upstream_transcript_variant
rs1000715473 -- 91,798,493(-) A/C upstream_transcript_variant
rs1000839515 -- 91,784,693(-) T/C intron_variant

Additional Variant Information for TNKS2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TNKS2-AS1 Gene

Disorders for TNKS2-AS1 Gene

Additional Disease Information for TNKS2-AS1

No disorders were found for TNKS2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TNKS2-AS1 Gene

Publications for TNKS2-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for TNKS2-AS1 Gene

Sources for TNKS2-AS1 Gene

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