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Aliases for TNKS2-AS1 Gene

Subcategory (RNA class) for TNKS2-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TNKS2-AS1 Gene

  • TNKS2 Antisense RNA 1 (Head To Head) 2 3
  • TNKS2 Antisense RNA 1 2

External Ids for TNKS2-AS1 Gene

ORGUL Members for TNKS2-AS1 Gene

Previous GeneCards Identifiers for TNKS2-AS1 Gene

  • GC10M093545

Summaries for TNKS2-AS1 Gene

GeneCards Summary for TNKS2-AS1 Gene

TNKS2-AS1 (TNKS2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TNKS2-AS1 Gene

Genomics for TNKS2-AS1 Gene

Genomic Location for TNKS2-AS1 Gene

Start:
91,782,839 bp from pter
End:
91,798,291 bp from pter
Size:
15,453 bases
Orientation:
Minus strand

Genomic View for TNKS2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TNKS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TNKS2-AS1 Gene

No data available for Regulatory Elements for TNKS2-AS1 Gene

Proteins for TNKS2-AS1 Gene

Post-translational modifications for TNKS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNKS2-AS1 Gene

Domains for TNKS2-AS1 Gene

Gene Families for TNKS2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TNKS2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TNKS2-AS1 Gene

Function for TNKS2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TNKS2-AS1 Gene

Localization for TNKS2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TNKS2-AS1 Gene

Pathways for TNKS2-AS1 Gene

SuperPathways for TNKS2-AS1 Gene

No Data Available

Interacting Proteins for TNKS2-AS1 Gene

Gene Ontology (GO) - Biological Process for TNKS2-AS1 Gene

None

No data available for Pathways by source for TNKS2-AS1 Gene

Transcripts for TNKS2-AS1 Gene

mRNA/cDNA for TNKS2-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TNKS2-AS1 Gene

TNKS2 antisense RNA 1 (head to head):
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TNKS2-AS1
    • Block miRNA regulation of TNKS2-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for TNKS2-AS1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for TNKS2-AS1 Gene

    No ASD Table

    Relevant External Links for TNKS2-AS1 Gene

    GeneLoc Exon Structure for
    TNKS2-AS1
    ECgene alternative splicing isoforms for
    TNKS2-AS1

    Expression for TNKS2-AS1 Gene

    mRNA expression in normal human tissues for TNKS2-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for TNKS2-AS1 Gene

    This gene is overexpressed in Testis (9.3).

    SOURCE GeneReport for Unigene cluster for TNKS2-AS1 Gene Hs.291528

    genes like me logo Genes that share expressions with TNKS2-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TNKS2-AS1 Gene

    Orthologs for TNKS2-AS1 Gene

    Evolution for TNKS2-AS1 Gene

    ENSEMBL:
    Gene Tree for TNKS2-AS1 (if available)
    TreeFam:
    Gene Tree for TNKS2-AS1 (if available)

    No data available for Orthologs for TNKS2-AS1 Gene

    Paralogs for TNKS2-AS1 Gene

    No data available for Paralogs for TNKS2-AS1 Gene

    Variants for TNKS2-AS1 Gene

    Sequence variations from dbSNP and Humsavar for TNKS2-AS1 Gene

    SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
    rs1592051 -- 91,782,429(+) CCACT(C/T)TATGA downstream-variant-500B
    rs2096080 -- 91,788,980(+) TCCCC(C/T)CTAAT intron-variant
    rs2096081 -- 91,792,755(+) CAAGA(C/T)GTTAA intron-variant
    rs3043643 -- 91,793,377(+) AAAAA(-/AA)TAGCT intron-variant
    rs7893876 -- 91,786,035(+) atttg(A/G)gaggt intron-variant

    Relevant External Links for TNKS2-AS1 Gene

    HapMap Linkage Disequilibrium report
    TNKS2-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TNKS2-AS1 Gene

    Disorders for TNKS2-AS1 Gene

    No disorders were found for TNKS2-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for TNKS2-AS1 Gene

    Publications for TNKS2-AS1 Gene

    1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

    Products for TNKS2-AS1 Gene

    Sources for TNKS2-AS1 Gene

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