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Aliases for TNKS2-AS1 Gene

Subcategory (RNA class) for TNKS2-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TNKS2-AS1 Gene

  • TNKS2 Antisense RNA 1 (Head To Head) 2 3
  • TNKS2 Antisense RNA 1 2

External Ids for TNKS2-AS1 Gene

ORGUL Members for TNKS2-AS1 Gene

Summaries for TNKS2-AS1 Gene

GeneCards Summary for TNKS2-AS1 Gene

TNKS2-AS1 (TNKS2 Antisense RNA 1 (Head To Head)) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TNKS2-AS1 Gene

Genomics for TNKS2-AS1 Gene

Genomic Location for TNKS2-AS1 Gene

Start:
91,782,839 bp from pter
End:
91,798,291 bp from pter
Size:
15,453 bases
Orientation:
Minus strand

Genomic View for TNKS2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TNKS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TNKS2-AS1 Gene

No data available for Regulatory Elements for TNKS2-AS1 Gene

Proteins for TNKS2-AS1 Gene

Post-translational modifications for TNKS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNKS2-AS1 Gene

Domains for TNKS2-AS1 Gene

Gene Families for TNKS2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with TNKS2-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for TNKS2-AS1 Gene

Function for TNKS2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TNKS2-AS1 Gene

Localization for TNKS2-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for TNKS2-AS1 Gene

Pathways for TNKS2-AS1 Gene

SuperPathways for TNKS2-AS1 Gene

No Data Available

Interacting Proteins for TNKS2-AS1 Gene

Gene Ontology (GO) - Biological Process for TNKS2-AS1 Gene

None

No data available for Pathways by source for TNKS2-AS1 Gene

Transcripts for TNKS2-AS1 Gene

mRNA/cDNA for TNKS2-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TNKS2-AS1 Gene

TNKS2 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TNKS2-AS1 Gene

No ASD Table

Relevant External Links for TNKS2-AS1 Gene

GeneLoc Exon Structure for
TNKS2-AS1
ECgene alternative splicing isoforms for
TNKS2-AS1

Expression for TNKS2-AS1 Gene

mRNA expression in normal human tissues for TNKS2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TNKS2-AS1 Gene

This gene is overexpressed in Testis (9.3).

SOURCE GeneReport for Unigene cluster for TNKS2-AS1 Gene Hs.291528

genes like me logo Genes that share expressions with TNKS2-AS1: view

Orthologs for TNKS2-AS1 Gene

Evolution for TNKS2-AS1 Gene

ENSEMBL:
Gene Tree for TNKS2-AS1 (if available)
TreeFam:
Gene Tree for TNKS2-AS1 (if available)

No data available for Orthologs for TNKS2-AS1 Gene

Paralogs for TNKS2-AS1 Gene

No data available for Paralogs for TNKS2-AS1 Gene

Variants for TNKS2-AS1 Gene

Sequence variations from dbSNP and Humsavar for TNKS2-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1592051 -- 91,782,429(+) CCACT(C/T)TATGA downstream-variant-500B
rs2096080 -- 91,788,980(+) TCCCC(C/T)CTAAT intron-variant
rs2096081 -- 91,792,755(+) CAAGA(C/T)GTTAA intron-variant
rs3043643 -- 91,793,377(+) AAAAA(-/AA)TAGCT intron-variant
rs7893876 -- 91,786,035(+) atttg(A/G)gaggt intron-variant

Relevant External Links for TNKS2-AS1 Gene

HapMap Linkage Disequilibrium report
TNKS2-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for TNKS2-AS1 Gene

Disorders for TNKS2-AS1 Gene

No disorders were found for TNKS2-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for TNKS2-AS1 Gene

Publications for TNKS2-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for TNKS2-AS1 Gene

Sources for TNKS2-AS1 Gene

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