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Aliases for TNK2-AS1 Gene

Subcategory (RNA class) for TNK2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TNK2-AS1 Gene

  • TNK2 Antisense RNA 1 2 3 5

External Ids for TNK2-AS1 Gene

Previous GeneCards Identifiers for TNK2-AS1 Gene

  • GC03P195636

Summaries for TNK2-AS1 Gene

GeneCards Summary for TNK2-AS1 Gene

TNK2-AS1 (TNK2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TNK2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TNK2-AS1 Gene

Genomics for TNK2-AS1 Gene

GeneHancer (GH) Regulatory Elements for TNK2-AS1 Gene

Promoters and enhancers for TNK2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I195905 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 556.6 +0.8 832 7 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A YBX1 FEZF1 ZNF2 ZBTB7B TNK2-AS1 TNK2 SDHAP2 ENSG00000271662 LINC00969 SDHAP1 RNU6ATAC24P UBXN7 MIR570 MUC20
GH03I195891 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 6.3 -12.9 -12927 7.4 PKNOX1 CLOCK FOXA2 ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B ZNF213 TNK2 ENSG00000271662 LINC00969 TNK2-AS1 MUC20 SDHAP2 MUC4 MIR6829
GH03I195899 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 6.2 -7.0 -7020 3.5 HDGF CTCF MAX EBF1 CEBPG POLR2A NFATC1 BCLAF1 IKZF2 RUNX3 ENSG00000271662 LINC00969 ACAP2 LOC100131360 MUC20 TNK2-AS1 SDHAP2 PPP1R2 TNK2 PCYT1A
GH03I195903 Enhancer 0.9 ENCODE dbSUPER 5.3 -3.8 -3822 2.1 HDGF TEAD1 ZFP64 CEBPB CEBPG ELF1 ZBTB40 TEAD3 NFIC IKZF1 ENSG00000271662 MUC20 SDHAP2 TNK2-AS1 MUC4 TNK2 MIR6829
GH03I195889 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -18.0 -17958 1.2 CTCF AFF1 ZIC2 PPARG VEZF1 NR2C1 NR2F6 KDM1A HNF4A SDHAP2 MIR6829 TNK2-AS1 TNK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TNK2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TNK2-AS1 Gene

Genomic Locations for TNK2-AS1 Gene
chr3:195,908,076-195,911,257
(GRCh38/hg38)
Size:
3,182 bases
Orientation:
Plus strand
chr3:195,634,947-195,638,128
(GRCh37/hg19)

Genomic View for TNK2-AS1 Gene

Genes around TNK2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TNK2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TNK2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TNK2-AS1 Gene

Proteins for TNK2-AS1 Gene

Post-translational modifications for TNK2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNK2-AS1 Gene

Domains & Families for TNK2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TNK2-AS1 Gene

Function for TNK2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TNK2-AS1 Gene

Localization for TNK2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TNK2-AS1 Gene

Pathways & Interactions for TNK2-AS1 Gene

SuperPathways for TNK2-AS1 Gene

No Data Available

Interacting Proteins for TNK2-AS1 Gene

Gene Ontology (GO) - Biological Process for TNK2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TNK2-AS1 Gene

Drugs & Compounds for TNK2-AS1 Gene

No Compound Related Data Available

Transcripts for TNK2-AS1 Gene

mRNA/cDNA for TNK2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TNK2-AS1 Gene

No ASD Table

Relevant External Links for TNK2-AS1 Gene

GeneLoc Exon Structure for
TNK2-AS1
ECgene alternative splicing isoforms for
TNK2-AS1

Expression for TNK2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TNK2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TNK2-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x6.6).
genes like me logo Genes that share expression patterns with TNK2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TNK2-AS1 Gene

Orthologs for TNK2-AS1 Gene

Evolution for TNK2-AS1 Gene

ENSEMBL:
Gene Tree for TNK2-AS1 (if available)
TreeFam:
Gene Tree for TNK2-AS1 (if available)

No data available for Orthologs for TNK2-AS1 Gene

Paralogs for TNK2-AS1 Gene

No data available for Paralogs for TNK2-AS1 Gene

Variants for TNK2-AS1 Gene

Additional Variant Information for TNK2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TNK2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TNK2-AS1 Gene

Disorders for TNK2-AS1 Gene

Additional Disease Information for TNK2-AS1

No disorders were found for TNK2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TNK2-AS1 Gene

Publications for TNK2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for TNK2-AS1 Gene

Sources for TNK2-AS1 Gene

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