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Aliases for TNK2-AS1 Gene

Subcategory (RNA class) for TNK2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TNK2-AS1 Gene

  • TNK2 Antisense RNA 1 2 3 5

External Ids for TNK2-AS1 Gene

Previous GeneCards Identifiers for TNK2-AS1 Gene

  • GC03P195636

Summaries for TNK2-AS1 Gene

GeneCards Summary for TNK2-AS1 Gene

TNK2-AS1 (TNK2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TNK2-AS1 Gene

Genomics for TNK2-AS1 Gene

Regulatory Elements for TNK2-AS1 Gene

Enhancers for TNK2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F195905 1.3 FANTOM5 Ensembl ENCODE 6.6 +0.8 833 7.0 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A YBX1 FEZF1 ZNF2 FOS ENSG00000271662 SDHAP2 ENSG00000226345 ENSG00000213358 RPS29P3 LINC00969 MUC20 TNK2-AS1 ENSG00000231443 PPP1R2
GH03F195899 1 FANTOM5 ENCODE 6.2 -7.0 -7021 3.5 HDGF CTCF ZBTB2 MAX CEBPB CEBPG MNT ZFHX2 POLR2A EED ENSG00000271662 LINC00969 ACAP2 LOC100131360 MUC20 TNK2-AS1 SDHAP2 PPP1R2 TNK2 PCYT1A
GH03F195891 1 ENCODE 6.2 -12.9 -12928 7.4 ATF1 PKNOX1 ZFP64 ARID4B SIN3A ZNF2 GLIS2 ZNF207 ZNF143 DEK ENSG00000271662 LINC00969 TNK2-AS1 MUC20 SDHAP2 MUC4 MIR6829
GH03F195903 0.5 ENCODE 5.3 -3.8 -3822 2.1 HDGF WRNIP1 ZFP64 CEBPG ZBTB40 TEAD3 GATA3 SCRT2 RFX1 TEAD1 ENSG00000271662 MUC20 SDHAP2 TNK2-AS1 MUC4 MIR6829
GH03F195884 1.1 Ensembl ENCODE 0.3 -22.0 -22034 2.8 KLF1 TAL1 JUN ZFHX2 ZNF766 GLIS2 POLR2A NCOR1 FOS E2F6 MIR570 LINC00969 MUC4 SDHAP2 MIR6829 TNK2-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TNK2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for TNK2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001856623 -976 601 TBP PKNOX1 TBL1XR1 SIN3A YBX1 GLIS2 ELK1 ETV6 CREM CBFB
ENSR00001383673 1024 2601 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF48 ZNF2 GLIS2 GATA2 KLF7

Genomic Location for TNK2-AS1 Gene

Chromosome:
3
Start:
195,908,076 bp from pter
End:
195,911,257 bp from pter
Size:
3,182 bases
Orientation:
Plus strand

Genomic View for TNK2-AS1 Gene

Genes around TNK2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TNK2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TNK2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TNK2-AS1 Gene

Proteins for TNK2-AS1 Gene

Post-translational modifications for TNK2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNK2-AS1 Gene

Domains & Families for TNK2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TNK2-AS1 Gene

Function for TNK2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TNK2-AS1 Gene

Localization for TNK2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TNK2-AS1 Gene

Pathways & Interactions for TNK2-AS1 Gene

SuperPathways for TNK2-AS1 Gene

No Data Available

Interacting Proteins for TNK2-AS1 Gene

Gene Ontology (GO) - Biological Process for TNK2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TNK2-AS1 Gene

Transcripts for TNK2-AS1 Gene

mRNA/cDNA for TNK2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TNK2-AS1 Gene

No ASD Table

Relevant External Links for TNK2-AS1 Gene

GeneLoc Exon Structure for
TNK2-AS1
ECgene alternative splicing isoforms for
TNK2-AS1

Expression for TNK2-AS1 Gene

mRNA expression in normal human tissues for TNK2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TNK2-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x6.6).
genes like me logo Genes that share expression patterns with TNK2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TNK2-AS1 Gene

Orthologs for TNK2-AS1 Gene

Evolution for TNK2-AS1 Gene

ENSEMBL:
Gene Tree for TNK2-AS1 (if available)
TreeFam:
Gene Tree for TNK2-AS1 (if available)

No data available for Orthologs for TNK2-AS1 Gene

Paralogs for TNK2-AS1 Gene

No data available for Paralogs for TNK2-AS1 Gene

Variants for TNK2-AS1 Gene

Relevant External Links for TNK2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TNK2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TNK2-AS1 Gene

Disorders for TNK2-AS1 Gene

Relevant External Links for TNK2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TNK2-AS1

No disorders were found for TNK2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TNK2-AS1 Gene

Publications for TNK2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for TNK2-AS1 Gene

Sources for TNK2-AS1 Gene

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