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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TMSB10 Gene

protein-coding   GIFtS: 50
GCID: GC02P085132

thymosin beta 10

 Explore 28 diseases affiliated with
TMSB10 via our new
 Human Malady Compendium 
Biological research products
for TMSB10
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Thymosin Beta 101 2     Migration-Inducing Protein 122
TB101 2     Thymosin Beta-102
MIG122     PTMB103
Migration-Inducing Gene 122     THYB103

External Ids:    HGNC: 118791   Entrez Gene: 91682   Ensembl: ENSG000000345107   OMIM: 1883995   UniProtKB: P633133   

Export aliases for TMSB10 gene to outside databases

Previous GC identifers: GC02P085114 GC02P085426 GC02P085090 GC02P085107 GC02P085044 GC02P084986


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: TYB10_HUMAN, P63313
Function: Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G
actin) and therefore inhibits actin polymerization (By similarity)

Gene Wiki entry for TMSB10


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022184.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TMSB10 gene promoter:
         p53   AP-1   p300   FOXO4   ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTMSB10 promoter sequence
   Search SABiosciences Chromatin IP Primers for TMSB10

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TMSB10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2p11.2   Ensembl cytogenetic band:  2p11.2   HGNC cytogenetic band: 2p11.2

TMSB10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TMSB10 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P085132:  view genomic region     (about GC identifiers)

Start:
85,132,749 bp from pter      End:
85,133,799 bp from pter
Size:
1,051 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TYB10_HUMAN, P63313 (See protein sequence)
Recommended Name: Thymosin beta-10  
Size: 44 amino acids; 5026 Da
Subcellular location: Cytoplasm, cytoskeleton
Developmental stage: Found to decrease dramatically after birth
Sequence caution: Sequence=AAA36746.1; Type=Erroneous initiation; Sequence=AAC41691.1; Type=Erroneous initiation;
Secondary accessions: P13472 Q596K9

Explore the universe of human proteins at neXtProt for TMSB10: NX_P63313

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P63313

  • TMSB10 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_066926.1  
    ENSEMBL proteins: 
     ENSP00000233143  

    Human Recombinant Protein Products: 
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    Browse Proteins at Uscn

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IEA--
    GO:0005856cytoskeleton IEA--


    TMSB10 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TMSB10 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001152 Thymosin_b4
     IPR016323 Thymosin_b4_chordata

    Graphical View of Domain Structure for InterPro Entry P63313

    ProtoNet protein and cluster: P63313

    1 Blocks protein family: IPB001152 Thymosin beta-4

    UniProtKB/Swiss-Prot: TYB10_HUMAN, P63313
    Similarity: Belongs to the thymosin beta family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TYB10_HUMAN, P63313
    Function: Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G
    actin) and therefore inhibits actin polymerization (By similarity)

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    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003779actin binding IEA--


    TMSB10 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TMSB10

    STRING Interaction Network Preview (showing 5 interactants - click image to see 8)

    5/8 Interacting proteins for TMSB10 (P633133 ENSP000002331434) via UniProtKB, MINT, STRING, and/or I2D (see all 8)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TMOD1P282893, ENSP000002593654I2D: score=1 STRING: ENSP00000259365
    FOSP011003, ENSP000003062454I2D: score=1 STRING: ENSP00000306245
    SUFUENSP000003589184STRING: ENSP00000358918
    UBCENSP000003448184STRING: ENSP00000344818
    POT1ENSP000003502494STRING: ENSP00000350249
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0030036actin cytoskeleton organization IEA--
    GO:0042989sequestering of actin monomers IEA--


    TMSB10 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TMSB10 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TMSB10
    2 Novoseek chemical compound relationships for TMSB10 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    retinoic acid 28.8 2 2169566 (2)
    vegf 23.9 9 11156961 (3), 16496302 (2), 12914774 (1), 18854659 (1)

    Search CenterWatch for drugs/clinical trials and news about TMSB10 / TYB10 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TMSB10 gene: 
    NM_021103.3  

    Unigene Cluster for TMSB10:

    Thymosin beta 10
    Hs.446574  [show with all ESTs]
    Unigene Representative Sequence: BQ276852
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000233143(uc002sow.1)

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    Additional cDNA sequence: 

    AK130949.1 AK311952.1 AY453400.1 BC016025.1 BC016731.1 BC107889.1 M20259.1 M92381.1 
    S54005.1 

    24/41 DOTS entries (see all 41):

    DT.455409  DT.99926681  DT.99926733  DT.121001526  DT.100701944  DT.95219544  DT.101985573  DT.121001374 
    DT.95222543  DT.100701960  DT.99994789  DT.100848983  DT.100757256  DT.97760238  DT.101985574  DT.121001398 
    DT.92466041  DT.92466043  DT.100701909  DT.100701911  DT.121001388  DT.121001422  DT.95221885  DT.100701924 

    24/1350 AceView cDNA sequences (see all 1350):

    AA365522 AA307549 AA421628 BU626196 BU521099 BM757319 AU103119 F25762 
    AU103131 BQ231135 AJ705327 BQ674882 F36325 BM888592 BF724548 BQ712482 
    CB131510 BM796835 BQ230686 BM760559 BQ668952 BU181768 CB110572 AU103133 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for TMSB10    About this scheme

    ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c · 3d
    SP1:                          -                     
    SP2:                                                
    SP3:                          -                     


    ECgene alternative splicing isoforms for TMSB10

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TMSB10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGGGAAATCG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    TMSB10 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LimbZeugopodPrechondrocytic Mesenchymal CellsBone, Cartilage
    OvaryPrimary FolliclePrimary OocyteFemale Gametocytes, Germ Cells
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    Endoderm-like cells (Generation of hepato...)
    Definitive endoderm-like cells (A scalable, suspensi...)

    See TMSB10 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TMSB10

    SOURCE GeneReport for Unigene cluster: Hs.446574
        SABiosciences Expression via Pathway-Focused PCR Array including TMSB10: 
              Nephrotoxicity in human mouse rat

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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for TMSB10 gene from 1/6 species (see all 6)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    zebrafish
    (Danio rerio)
    Actinopterygii tmsb6
    si:ch211-11c15.36
    si:ch211-11c15.3
    73(a)
    69(a)
    1 ↔ many
    1 ↔ many
    21(25782878-25786220)
    14(35617038-35619396)


    ENSEMBL Gene Tree for TMSB10 (if available)
    TreeFam Gene Tree for TMSB10 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TMSB10 gene
    TMSB15B2  TMSB15A2  TMSB4Y2  TMSB4XP42  TMSB4X2  
    5 SIMAP similar genes for TMSB10 using alignment to 2 protein entries:     TYB10_HUMAN (see all proteins):
    TMSB15A    TMSB15B    TMSB4X    TMSB4XP4    TMSB4Y

    TMSB10 for paralogs           About GeneDecksing


    3 Pseudogenes.org Pseudogenes for TMSB10
    PGOHUM00000240566 PGOHUM00000235972 PGOHUM00000241657


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/65 NCBI SNPs in TMSB10 are shown (see all 65    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1463951411,2
    --85130764(+) ATAAGC/TGTGAT 1 -- us2k10--------
    rs1900659981,2
    --85130917(+) ACCCCA/GTCTCT 1 -- us2k10--------
    rs101800661,2
    C--85130921(+) cgtctC/Ttacta 1 -- us2k10--------
    rs67119421,2
    C,F,--85130945(+) tagccG/Agacat 1 -- us2k11Minor allele frequency- A:0.50NA 4
    rs67120441,2
    C,--85131013(+) aacccA/Gggagg 1 -- us2k10--------
    rs124775391,2
    H--85131095(+) aaagaA/Gaaaaa 1 -- us2k1 trp30--------
    rs67151261,2
    C,F,A,H--85131170(+) AAAAAG/AAAAGA 1 -- us2k1 trp39Minor allele frequency- A:0.12NS EA NA WA CSA 719
    rs1443429831,2
    --85131170(+) AAAAA-/GAAAGA 1 -- us2k10--------
    rs1443572001,2
    --85131197(+) TGCCTC/TTTCTT 1 -- us2k10--------
    rs1487381741,2
    --85131280(+) ACAAGC/GCTATG 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for TMSB10 (85132749 - 85133799 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for TMSB10: --

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TMSB10 for disorders           About GeneDecksing

    OMIM gene information: 188399    OMIM disorders: --

    20/28 diseases for TMSB10 (see all 28):    About MalaCards
    middle ear cholesteatoma    graft versus host disease    anaplastic large cell lymphoma    rheumatic chorea
    cholesteatoma    interstitial lung disease    goiter    thyroid carcinoma
    ovarian cancer    scleroderma    breast cancer    pancreatitis
    thyroiditis    carcinoma    choroiditis    pancreatic cancer
    prostate carcinoma    melanoma    lung cancer    prostatitis

    1 disease from the University of Copenhagen DISEASES database for TMSB10:
    Tuberculosis

    10/11 Novoseek disease relationships for TMSB10 gene (see all 11)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    thyroid carcinoma 48.1 2 15254683 (1), 10487837 (1)
    neoplastic transformation 33.7 1 9485041 (1)
    pancreatic carcinoma 31 6 15983444 (1)
    goiter 26.9 3 10366416 (2)
    melanoma 15.7 4 8425765 (3)
    tumors 15 13 14989934 (2), 14975205 (2), 11956663 (1), 15983444 (1) (see all 7)
    cancer lung 15 4 18789485 (3)
    cancer 14.9 8 11709704 (1), 19909017 (1), 11710837 (1), 16786322 (1) (see all 7)
    breast cancer 13.3 3 16786322 (2), 8912542 (1)
    ovarian cancer 4.89 6 11709704 (2)


    Export disorders for TMSB10 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TMSB10 gene, integrated from 9 sources (see all 78):
    (articles sorted by number of sources associating them with TMSB10)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Sequence of a human kidney cDNA clone encoding thymosin beta 10. (PubMed id 3365256)1, 2, 3 McCreary V.... Toback F.G. (1988)
    2. Thymosin beta 10 levels in developing human brain and its regulation by retinoic acid in the HTB-10 neuroblastoma. (PubMed id 2169566)1, 2, 9 Hall A.K.... Morgan J.I. (1990)
    3. Thymosin beta-10 expression in melanoma cell lines and melanocytic lesions: a new progression marker for human cutaneous melanoma. (PubMed id 8425765)1, 2, 9 Weterman M.A.... Bloemers H.P.J. (1993)
    4. Thymosin beta-10 gene overexpression is a general event in human carcinogenesis. (PubMed id 10487837)1, 3, 9 Santelli G....Fusco A. (1999)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Localization of thymosin beta10 in breast cancer cells: relationship to actin cytoskeletal remodeling and cell motility. (PubMed id 16786322)1, 9 Maelan A.E....Larsson L.I. (2007)
    7. Expression of thymosin beta10 and its role in non-small cell lung cancer. (PubMed id 18789485)1, 9 Gu Y....Wang E. (2009)
    8. The interaction between E-tropomodulin and thymosin beta-10 rescues tumor cells from thymosin beta-10 mediated apoptosis by restoring actin architecture. (PubMed id 14741341)1, 9 Rho S.B....Lee J.H. (2004)
    9. Thymosin beta-10 is aberrantly expressed in pancreatic cancer and induces JNK activation. (PubMed id 19194824)1, 9 Li M....Yao Q. (2009)
    10. The identification of apoptosis-related residues in human thymosin beta-10 by mutational analysis and computational modeling. (PubMed id 16012174)1, 9 Rho S.B....Lee J.H. (2005)

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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 9168 HGNC: 11879 AceView: TMSB10 Ensembl:ENSG00000034510 euGenes: HUgn9168
    ECgene: TMSB10 H-InvDB: TMSB10

    (According to HUGE)
    About This Section
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    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
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    NameDescription
    PharmGKB entry for TMSB10 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for TMSB10 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
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    Patent Information for TMSB10 gene:
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