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Aliases for TMPRSS13 Gene

Aliases for TMPRSS13 Gene

  • Membrane-Type Mosaic Serine Protease 3 4
  • Transmembrane Protease, Serine 13 2 3
  • Transmembrane Protease, Serine 11 2 3
  • TMPRSS11 3 4
  • MSPS 3 6
  • MSPL 3 6
  • MSP 3 4
  • Transmembrane Protease Serine 13 3
  • Mosaic Serine Protease 4
  • EC 63
  • EC 3.4.21.- 4
  • EC 3.4.21 63

External Ids for TMPRSS13 Gene

Previous HGNC Symbols for TMPRSS13 Gene

  • TMPRSS11

Previous GeneCards Identifiers for TMPRSS13 Gene

  • GC11M117277
  • GC11M117771
  • GC11M113705

Summaries for TMPRSS13 Gene

Entrez Gene Summary for TMPRSS13 Gene

  • This gene encodes a member of the type II transmembrane serine protease family. Transmembrane serine proteases are regulated by protease inhibitors and known to function in development, homeostasis, infection, and tumorigenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]

GeneCards Summary for TMPRSS13 Gene

TMPRSS13 is a Protein Coding gene. Among its related pathways are Influenza A. GO annotations related to this gene include serine-type endopeptidase activity and scavenger receptor activity. An important paralog of this gene is HPN.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMPRSS13 Gene

Genomics for TMPRSS13 Gene

Regulatory Elements for TMPRSS13 Gene

Genomic Location for TMPRSS13 Gene

117,900,641 bp from pter
117,929,459 bp from pter
28,819 bases
Minus strand

Genomic View for TMPRSS13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMPRSS13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMPRSS13 Gene

Proteins for TMPRSS13 Gene

  • Protein details for TMPRSS13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Transmembrane protease serine 13
    Protein Accession:
    Secondary Accessions:
    • B4DTM9
    • E9PIJ5
    • F8WAJ3
    • Q86YM4
    • Q96JY8
    • Q9BYE1

    Protein attributes for TMPRSS13 Gene

    586 amino acids
    Molecular mass:
    63153 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TMPRSS13 Gene


neXtProt entry for TMPRSS13 Gene

Proteomics data for TMPRSS13 Gene at MOPED

Selected DME Specific Peptides for TMPRSS13 Gene

Post-translational modifications for TMPRSS13 Gene

  • Glycosylation at Asn250, Asn287, Asn400, and Asn440
  • Modification sites at PhosphoSitePlus

Antibody Products

Domains for TMPRSS13 Gene

Gene Families for TMPRSS13 Gene

Suggested Antigen Peptide Sequences for TMPRSS13 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 LDL-receptor class A domain.
  • Belongs to the peptidase S1 family.
  • Contains 1 LDL-receptor class A domain.
  • Contains 1 peptidase S1 domain.
  • Contains 1 SRCR domain.
  • Belongs to the peptidase S1 family.
genes like me logo Genes that share domains with TMPRSS13: view

Function for TMPRSS13 Gene

Enzyme Numbers (IUBMB) for TMPRSS13 Gene

Gene Ontology (GO) - Molecular Function for TMPRSS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003824 catalytic activity --
GO:0004252 serine-type endopeptidase activity NAS 11267681
GO:0005044 scavenger receptor activity IEA --
GO:0005515 protein binding --
GO:0070008 serine-type exopeptidase activity --
genes like me logo Genes that share ontologies with TMPRSS13: view

Phenotypes for TMPRSS13 Gene

MGI mutant phenotypes for TMPRSS13:
inferred from 1 alleles
GenomeRNAi human phenotypes for TMPRSS13:
genes like me logo Genes that share phenotypes with TMPRSS13: view

Animal Model Products

CRISPR Products

miRNA for TMPRSS13 Gene

miRTarBase miRNAs that target TMPRSS13

No data available for Molecular function , Animal Models , Transcription Factor Targets and HOMER Transcription for TMPRSS13 Gene

Localization for TMPRSS13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMPRSS13 Gene

Membrane; Single-pass type II membrane protein.

Subcellular locations from

Jensen Localization Image for TMPRSS13 Gene COMPARTMENTS Subcellular localization image for TMPRSS13 gene
Compartment Confidence
plasma membrane 3
cytosol 2
extracellular 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for TMPRSS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane --
GO:0016021 integral component of membrane NAS 11267681
GO:0072562 blood microparticle IDA 22516433
genes like me logo Genes that share ontologies with TMPRSS13: view

Pathways for TMPRSS13 Gene

SuperPathways for TMPRSS13 Gene

Superpath Contained pathways
1 Influenza A
genes like me logo Genes that share pathways with TMPRSS13: view

Pathways by source for TMPRSS13 Gene

1 KEGG pathway for TMPRSS13 Gene

Interacting Proteins for TMPRSS13 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
Selected Interacting proteins: ENSP00000434279 Q9BYE2-TMPSD_HUMAN for TMPRSS13 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for TMPRSS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
GO:0006898 receptor-mediated endocytosis IEA --
genes like me logo Genes that share ontologies with TMPRSS13: view

Drugs for TMPRSS13 Gene

(1) ApexBio Compounds for TMPRSS13 Gene

Compound Action Cas Number
PMSF Serine proteinases inhibitor, irreversible [329-98-6]

(2) Novoseek inferred chemical compound relationships for TMPRSS13 Gene

Compound -log(P) Hits PubMed IDs
serine 58.3 4
fibrinogen 24.7 1
genes like me logo Genes that share compounds with TMPRSS13: view

Transcripts for TMPRSS13 Gene

Unigene Clusters for TMPRSS13 Gene

Transmembrane protease, serine 13:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMPRSS13

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMPRSS13 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16
SP1: - - - - -
SP2: -
SP3: -
SP4: - - - -
SP6: - - - - -

Relevant External Links for TMPRSS13 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TMPRSS13 Gene

mRNA expression in normal human tissues for TMPRSS13 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for TMPRSS13 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (15.5), Skin - Not Sun Exposed (Suprapubic) (11.6), and Esophagus - Mucosa (5.9).

Protein differential expression in normal tissues for TMPRSS13 Gene

This gene is overexpressed in Cervix (64.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for TMPRSS13 Gene

SOURCE GeneReport for Unigene cluster for TMPRSS13 Gene Hs.266308

mRNA Expression by UniProt/SwissProt for TMPRSS13 Gene

Tissue specificity: Isoform 1 and isoform 3 are predominantly expressed in lung, placenta, pancreas, and prostate. Isoform 3 is weakly expressed in testis and peripheral blood lymphocytes.
genes like me logo Genes that share expressions with TMPRSS13: view

Expression partners for TMPRSS13 Gene

* - Elite partner

Primer Products

In Situ Assay Products

Orthologs for TMPRSS13 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TMPRSS13 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia TMPRSS13 35
  • 83.47 (n)
  • 80.8 (a)
  • 78 (a)
(Canis familiaris)
Mammalia TMPRSS13 35
  • 87.07 (n)
  • 87.6 (a)
  • 84 (a)
(Mus musculus)
Mammalia Tmprss13 35
  • 85.4 (n)
  • 85.95 (a)
Tmprss13 16
Tmprss13 36
  • 84 (a)
(Pan troglodytes)
Mammalia TMPRSS13 35
  • 97.93 (n)
  • 96.71 (a)
  • 98 (a)
(Rattus norvegicus)
Mammalia Tmprss13 35
  • 84.67 (n)
  • 84.86 (a)
(Monodelphis domestica)
Mammalia TMPRSS13 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia TMPRSS13 36
  • 67 (a)
(Gallus gallus)
Aves LOC100859131 35
  • 68.84 (n)
  • 62.56 (a)
  • 61 (a)
(Anolis carolinensis)
Reptilia TMPRSS13 36
  • 57 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia tmprss13 35
  • 52.59 (n)
  • 44.94 (a)
(Danio rerio)
Actinopterygii tmprss13b 35
  • 50.63 (n)
  • 45.97 (a)
tmprss13a 36
  • 34 (a)
tmprss13b 36
  • 38 (a)
Species with no ortholog for TMPRSS13:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMPRSS13 Gene

Gene Tree for TMPRSS13 (if available)
Gene Tree for TMPRSS13 (if available)

Paralogs for TMPRSS13 Gene

genes like me logo Genes that share paralogs with TMPRSS13: view

Variants for TMPRSS13 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for TMPRSS13 Gene

The repeat A-S-P-A-[GLQR] is polymorphic and the number of copies varies between 12 to 14

Sequence variations from dbSNP and Humsavar for TMPRSS13 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs477408 -- 117,904,341(+) CATCC(A/G)TGCAC intron-variant
rs491822 -- 117,902,133(+) GAGTC(C/T)GATGG utr-variant-3-prime
rs494457 -- 117,902,395(-) TTGCT(C/G)TCCCT intron-variant
rs543290 -- 117,900,283(+) CCAAA(A/C)CTGAC downstream-variant-500B
rs568060 -- 117,900,682(+) GCTGG(C/G)GGCTG utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for TMPRSS13 Gene

Variant ID Type Subtype PubMed ID
esv2745121 CNV Deletion 23290073

Relevant External Links for TMPRSS13 Gene

HapMap Linkage Disequilibrium report

Disorders for TMPRSS13 Gene

Relevant External Links for TMPRSS13

Genetic Association Database (GAD)

No disorders were found for TMPRSS13 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for TMPRSS13 Gene

Publications for TMPRSS13 Gene

  1. Cloning and expression of novel mosaic serine proteases with and without a transmembrane domain from human lung. (PMID: 11267681) Kim D.R. … Kido H. (Biochim. Biophys. Acta 2001) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 3 4
  4. MSPL/TMPRSS13. (PMID: 17981585) Kido H. … Okumura Y. (Front. Biosci. 2008) 3 23
  5. Novel type II transmembrane serine proteases, MSPL and TMPRSS13, Proteolytically activate membrane fusion activity of the hemagglutinin of highly pathogenic avian influenza viruses and induce their multicycle replication. (PMID: 20219906) Okumura Y. … Kido H. (J. Virol. 2010) 3 23

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