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Aliases for TMPRSS11GP Gene

Aliases for TMPRSS11GP Gene

  • Transmembrane Protease, Serine 11G, Pseudogene 2 3 5

External Ids for TMPRSS11GP Gene

Previous GeneCards Identifiers for TMPRSS11GP Gene

  • GC04M068861

Summaries for TMPRSS11GP Gene

GeneCards Summary for TMPRSS11GP Gene

TMPRSS11GP (Transmembrane Protease, Serine 11G, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMPRSS11GP Gene

Genomics for TMPRSS11GP Gene

Regulatory Elements for TMPRSS11GP Gene

Enhancers for TMPRSS11GP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G068129 0.8 ENCODE 21.1 -114.3 -114267 0.8 HDAC1 PKNOX1 CBX3 ZBTB40 TCF12 GATA2 RCOR1 ZBTB2 ZEB2 ZNF217 TMPRSS11GP TMPRSS11F FTLP10
GH04G068151 0.7 ENCODE 20.6 -136.7 -136737 1.3 FOXA2 SAP130 ZMYM3 CEBPG FOSL1 FOS NFE2 HLF MAFG ZEB2 GCOM2 TMPRSS11GP TMPRSS11F TMPRSS11BNL TMPRSS11D FTLP10
GH04G068074 0.6 ENCODE 20.7 -58.9 -58890 0.2 FOSL1 ATF3 USF2 CEBPB CEBPG EP300 ATF2 TMPRSS11GP TMPRSS11F RNU6-95P LOC100420693 SYT14P1
GH04G068180 0.5 ENCODE 21.1 -165.3 -165334 0.6 JUND CEBPB HNF4G HNF4A RAD21 TMPRSS11GP TMPRSS11D TMPRSS11BNL FTLP10 TMPRSS11F
GH04G067884 0.9 Ensembl ENCODE 7.6 +129.8 129819 2.8 JUN BHLHE40 ZNF384 RAD21 JUND ATF4 HNF4A FOS MAFK NFE2L2 TMPRSS11GP UGT2B15 TMPRSS11D TMPRSS11A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMPRSS11GP on UCSC Golden Path with GeneCards custom track

Genomic Location for TMPRSS11GP Gene

Chromosome:
4
Start:
67,991,684 bp from pter
End:
68,015,768 bp from pter
Size:
24,085 bases
Orientation:
Minus strand

Genomic View for TMPRSS11GP Gene

Genes around TMPRSS11GP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMPRSS11GP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMPRSS11GP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMPRSS11GP Gene

Proteins for TMPRSS11GP Gene

Post-translational modifications for TMPRSS11GP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMPRSS11GP Gene

Domains & Families for TMPRSS11GP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMPRSS11GP Gene

Function for TMPRSS11GP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMPRSS11GP Gene

Localization for TMPRSS11GP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMPRSS11GP Gene

Pathways & Interactions for TMPRSS11GP Gene

SuperPathways for TMPRSS11GP Gene

No Data Available

Interacting Proteins for TMPRSS11GP Gene

Gene Ontology (GO) - Biological Process for TMPRSS11GP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMPRSS11GP Gene

Drugs & Compounds for TMPRSS11GP Gene

No Compound Related Data Available

Transcripts for TMPRSS11GP Gene

mRNA/cDNA for TMPRSS11GP Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMPRSS11GP Gene

Transmembrane protease, serine 11G, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMPRSS11GP Gene

No ASD Table

Relevant External Links for TMPRSS11GP Gene

GeneLoc Exon Structure for
TMPRSS11GP
ECgene alternative splicing isoforms for
TMPRSS11GP

Expression for TMPRSS11GP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMPRSS11GP Gene

mRNA differential expression in normal tissues according to GTEx for TMPRSS11GP Gene

This gene is overexpressed in Esophagus - Mucosa (x18.3), Vagina (x10.5), Skin - Not Sun Exposed (Suprapubic) (x6.7), Cervix - Ectocervix (x5.0), Skin - Sun Exposed (Lower leg) (x4.7), and Minor Salivary Gland (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of TMPRSS11GP Gene:

TMPRSS11GP

SOURCE GeneReport for Unigene cluster for TMPRSS11GP Gene:

Hs.646883
genes like me logo Genes that share expression patterns with TMPRSS11GP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMPRSS11GP Gene

Orthologs for TMPRSS11GP Gene

Evolution for TMPRSS11GP Gene

ENSEMBL:
Gene Tree for TMPRSS11GP (if available)
TreeFam:
Gene Tree for TMPRSS11GP (if available)

No data available for Orthologs for TMPRSS11GP Gene

Paralogs for TMPRSS11GP Gene

No data available for Paralogs for TMPRSS11GP Gene

Variants for TMPRSS11GP Gene

Sequence variations from dbSNP and Humsavar for TMPRSS11GP Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000012845 -- 67,994,006(+) CCTGA(C/T)AAGAA nc-transcript-variant
rs1000382383 -- 67,995,596(+) GTAAA(C/T)GCCTT intron-variant
rs1001042513 -- 67,995,536(+) GTGAA(G/T)CAGTC intron-variant
rs10012653 -- 67,993,443(+) TAATG(C/T)TTATA intron-variant
rs10012669 -- 67,993,492(+) TAACA(A/C/G)TTTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMPRSS11GP Gene

Variant ID Type Subtype PubMed ID
dgv658n27 CNV loss 19166990
dgv9101n54 CNV loss 21841781
esv22957 CNV gain 19812545
esv2676202 CNV deletion 23128226
esv2759257 CNV gain 17122850
esv35010 CNV gain 17911159
esv3569470 CNV loss 25503493
esv3600856 CNV gain 21293372
esv3600857 CNV gain 21293372
esv3600858 CNV loss 21293372
nsv1003474 CNV loss 25217958
nsv1007376 CNV gain 25217958
nsv10514 CNV gain 18304495
nsv433367 CNV gain 18776910
nsv469718 CNV gain 16826518
nsv470043 CNV loss 18288195
nsv517749 CNV loss 19592680
nsv594505 CNV loss 21841781
nsv818242 CNV gain 17921354

Relevant External Links for TMPRSS11GP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMPRSS11GP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMPRSS11GP Gene

Disorders for TMPRSS11GP Gene

Relevant External Links for TMPRSS11GP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMPRSS11GP

No disorders were found for TMPRSS11GP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMPRSS11GP Gene

Publications for TMPRSS11GP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 3 64
  2. Type II transmembrane serine proteases. (PMID: 19487698) Bugge T.H. … Wu Q. (J. Biol. Chem. 2009) 3 64

Products for TMPRSS11GP Gene

Sources for TMPRSS11GP Gene

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