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Aliases for TMPRSS11GP Gene

Aliases for TMPRSS11GP Gene

  • Transmembrane Protease, Serine 11G, Pseudogene 2 3

External Ids for TMPRSS11GP Gene

Previous GeneCards Identifiers for TMPRSS11GP Gene

  • GC04M068861

Summaries for TMPRSS11GP Gene

GeneCards Summary for TMPRSS11GP Gene

TMPRSS11GP is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMPRSS11GP Gene

Genomics for TMPRSS11GP Gene

Genomic Location for TMPRSS11GP Gene

Start:
67,991,684 bp from pter
End:
68,015,768 bp from pter
Size:
24,085 bases
Orientation:
Minus strand

Genomic View for TMPRSS11GP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMPRSS11GP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMPRSS11GP Gene

No data available for Regulatory Elements for TMPRSS11GP Gene

Proteins for TMPRSS11GP Gene

Post-translational modifications for TMPRSS11GP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMPRSS11GP Gene

Domains for TMPRSS11GP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMPRSS11GP Gene

Function for TMPRSS11GP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMPRSS11GP Gene

Localization for TMPRSS11GP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMPRSS11GP Gene

Pathways for TMPRSS11GP Gene

SuperPathways for TMPRSS11GP Gene

No Data Available

Interacting Proteins for TMPRSS11GP Gene

Gene Ontology (GO) - Biological Process for TMPRSS11GP Gene

None

No data available for Pathways by source for TMPRSS11GP Gene

Transcripts for TMPRSS11GP Gene

mRNA/cDNA for TMPRSS11GP Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMPRSS11GP Gene

Transmembrane protease, serine 11G, pseudogene:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TMPRSS11GP
    • Block miRNA regulation of TMPRSS11GP using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for TMPRSS11GP

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for TMPRSS11GP Gene

    No ASD Table

    Relevant External Links for TMPRSS11GP Gene

    GeneLoc Exon Structure for
    TMPRSS11GP
    ECgene alternative splicing isoforms for
    TMPRSS11GP

    Expression for TMPRSS11GP Gene

    mRNA expression in normal human tissues for TMPRSS11GP Gene

    mRNA differential expression in normal tissues according to GTEx for TMPRSS11GP Gene

    This gene is overexpressed in Esophagus - Mucosa (18.3), Vagina (10.5), Skin - Not Sun Exposed (Suprapubic) (6.7), Cervix - Ectocervix (5.0), Skin - Sun Exposed (Lower leg) (4.7), and Minor Salivary Gland (4.2).

    SOURCE GeneReport for Unigene cluster for TMPRSS11GP Gene Hs.646883

    genes like me logo Genes that share expressions with TMPRSS11GP: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TMPRSS11GP Gene

    Orthologs for TMPRSS11GP Gene

    Evolution for TMPRSS11GP Gene

    ENSEMBL:
    Gene Tree for TMPRSS11GP (if available)
    TreeFam:
    Gene Tree for TMPRSS11GP (if available)

    No data available for Orthologs for TMPRSS11GP Gene

    Paralogs for TMPRSS11GP Gene

    No data available for Paralogs for TMPRSS11GP Gene

    Variants for TMPRSS11GP Gene

    Sequence variations from dbSNP and Humsavar for TMPRSS11GP Gene

    SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
    rs1347784 -- 67,994,980(+) TGAAT(C/T)TAGAA intron-variant
    rs1347785 -- 67,995,259(+) TTTAC(A/G)TTGGA intron-variant
    rs1370835 -- 67,992,831(+) ATATC(C/T)TAATT intron-variant
    rs1370836 -- 67,997,183(+) CATCT(A/G)TTTCT intron-variant
    rs1370837 -- 67,997,937(+) TACAC(A/G)TAGAT upstream-variant-2KB

    Relevant External Links for TMPRSS11GP Gene

    HapMap Linkage Disequilibrium report
    TMPRSS11GP

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TMPRSS11GP Gene

    Disorders for TMPRSS11GP Gene

    No disorders were found for TMPRSS11GP Gene.

    No data available for UniProtKB/Swiss-Prot for TMPRSS11GP Gene

    Publications for TMPRSS11GP Gene

    1. Type II transmembrane serine proteases. (PMID: 19487698) Bugge T.H. … Wu Q. (J. Biol. Chem. 2009) 3
    2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 3

    Products for TMPRSS11GP Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate TMPRSS11GP
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for TMPRSS11GP
      • Block miRNA regulation of TMPRSS11GP using miScript Target Protectors

      Sources for TMPRSS11GP Gene

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