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Aliases for TMPOP1 Gene

Aliases for TMPOP1 Gene

  • Thymopoietin Pseudogene 1 2 3 5
  • Thymopoietin-Like 1 2 3
  • Em:AB014080.3 3
  • TMPOL1 3

External Ids for TMPOP1 Gene

Previous HGNC Symbols for TMPOP1 Gene

  • TMPOL1

Previous GeneCards Identifiers for TMPOP1 Gene

  • GC06U900657
  • GC06P030543
  • GC06P030435
  • GC06P030555

Summaries for TMPOP1 Gene

GeneCards Summary for TMPOP1 Gene

TMPOP1 (Thymopoietin Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMPOP1 Gene

Genomics for TMPOP1 Gene

Regulatory Elements for TMPOP1 Gene

Enhancers for TMPOP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F030746 1.9 FANTOM5 Ensembl ENCODE 16.2 +285.2 285203 9.5 MLX CREB3L1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 IER3 GTF2H4 PPP1R10 DHX16 LY6G5B MICA PAIP1P1 DDX39B ABCF1 HLA-K
GH06F030678 1.6 FANTOM5 ENCODE 16.2 +219.1 219101 13.5 CREB3L1 MLX YBX1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 SP3 IER3 RPL7P4 HLA-E PPP1R18 PPP1R10 TMPOP1 UBQLN1P1 ENSG00000233902 SNORA38 HLA-P
GH06F031352 1.3 FANTOM5 ENCODE 16.2 +890.0 889967 7.0 HDGF PKNOX1 ATF1 ZNF493 WRNIP1 ZFP64 SIN3A NSD2 ZNF2 GLIS2 LY6G5B DDX39B ATF6B NFKBIL1 LSM2 PPP1R10 DHX16 HLA-C PPT2 GTF2H4
GH06F030739 1.2 ENCODE 16.2 +276.7 276681 6.5 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC MEF2D RPL7P4 DHX16 TMPOP1 UBQLN1P1 SNORA38 ENSG00000233902 HLA-P PPP1R10 GNL1 RPL3P2
GH06F030645 1.2 ENCODE 16.2 +181.1 181067 2.6 HDGF PKNOX1 ARNT MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 RPL7P4 ABCF1 TMPOP1 UBQLN1P1 SNORA38 HLA-P ENSG00000233902 DHX16 DDX39B HCG18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMPOP1 on UCSC Golden Path with GeneCards custom track

Promoters for TMPOP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001879659 475 201 BCOR ZNF362 L3MBTL2 RNF2 NR4A1 ZNF384 UBTF ZNF48 CCNT2 SMARCA4

Genomic Location for TMPOP1 Gene

Chromosome:
6
Start:
30,466,225 bp from pter
End:
30,468,869 bp from pter
Size:
2,645 bases
Orientation:
Plus strand

Genomic View for TMPOP1 Gene

Genes around TMPOP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMPOP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMPOP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TMPOP1 Gene

Post-translational modifications for TMPOP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMPOP1 Gene

Domains & Families for TMPOP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMPOP1 Gene

Function for TMPOP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMPOP1 Gene

Localization for TMPOP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMPOP1 Gene

Pathways & Interactions for TMPOP1 Gene

SuperPathways for TMPOP1 Gene

No Data Available

Interacting Proteins for TMPOP1 Gene

Gene Ontology (GO) - Biological Process for TMPOP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMPOP1 Gene

Transcripts for TMPOP1 Gene

mRNA/cDNA for TMPOP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMPOP1 Gene

No ASD Table

Relevant External Links for TMPOP1 Gene

GeneLoc Exon Structure for
TMPOP1
ECgene alternative splicing isoforms for
TMPOP1

Expression for TMPOP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMPOP1 Gene

mRNA differential expression in normal tissues according to GTEx for TMPOP1 Gene

This gene is overexpressed in Testis (x10.7), Whole Blood (x5.9), Skin - Sun Exposed (Lower leg) (x4.2), and Brain - Frontal Cortex (BA9) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of TMPOP1 Gene:

TMPOP1
genes like me logo Genes that share expression patterns with TMPOP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMPOP1 Gene

Orthologs for TMPOP1 Gene

Evolution for TMPOP1 Gene

ENSEMBL:
Gene Tree for TMPOP1 (if available)
TreeFam:
Gene Tree for TMPOP1 (if available)

No data available for Orthologs for TMPOP1 Gene

Paralogs for TMPOP1 Gene

No data available for Paralogs for TMPOP1 Gene

Variants for TMPOP1 Gene

Relevant External Links for TMPOP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMPOP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMPOP1 Gene

Disorders for TMPOP1 Gene

No disorders were found for TMPOP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMPOP1 Gene

Publications for TMPOP1 Gene

No publications were found for TMPOP1 Gene.

Products for TMPOP1 Gene

Sources for TMPOP1 Gene

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