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Aliases for TMLHE-AS1 Gene

Subcategory (RNA class) for TMLHE-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMLHE-AS1 Gene

  • TMLHE Antisense RNA 1 2 3 5
  • TMLHE Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TMLHE-AS1 Gene

Previous GeneCards Identifiers for TMLHE-AS1 Gene

  • GC0XP154698
  • GC0XP154699
  • GC0XP154702
  • GC0XP154707

Summaries for TMLHE-AS1 Gene

GeneCards Summary for TMLHE-AS1 Gene

TMLHE-AS1 (TMLHE Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TMLHE-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMLHE-AS1 Gene

Genomics for TMLHE-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMLHE-AS1 Gene

Promoters and enhancers for TMLHE-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI155466 Enhancer 0.2 Ensembl 550.8 +0.2 161 1 ENSG00000225393 TMLHE-AS1 GC0XP155471 GC0XP155470 GC0XP155469
GH0XI155025 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 10.2 -438.9 -438883 3.7 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 YY1 ZNF766 ZNF207 FOS SP3 F8 FUNDC2 WASH6P F8A1 SNORA56 SLC10A3 SNORA70 TMLHE-AS1 EMD GAB3
GH0XI154760 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 10.2 -703.5 -703462 4.4 HDGF CLOCK FOXA2 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF213 ZNF143 DKC1 F8A1 HCFC1 SNORA56 SLC10A3 SNORA70 TMLHE-AS1 EMD GC0XP154771 GC0XP154770
GH0XI154477 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.2 -987.6 -987601 2.3 PKNOX1 MLX ARID4B SIN3A FEZF1 ZNF2 ZBTB7B POLR2B ZNF766 E2F8 LAGE3 FAM3A HCFC1 SLC10A3 SNORA56 SNORA70 TMLHE-AS1 EMD PLXNA3
GH0XI154723 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -735.1 -735115 16 FOXA2 ZFP64 IRF4 YY1 ZNF213 FOS RUNX3 RXRA JUNB ZC3H11A DKC1 SNORA70 HCFC1 SNORA56 F8A1 EMD GAB3 PLXNA3 F8A2 SLC10A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMLHE-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMLHE-AS1 Gene

Genomic Locations for TMLHE-AS1 Gene
chrX:155,466,540-155,611,616
(GRCh38/hg38)
Size:
145,077 bases
Orientation:
Plus strand
chrX:154,695,631-154,841,277
(GRCh37/hg19)

Genomic View for TMLHE-AS1 Gene

Genes around TMLHE-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMLHE-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMLHE-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMLHE-AS1 Gene

Proteins for TMLHE-AS1 Gene

Post-translational modifications for TMLHE-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMLHE-AS1 Gene

Domains & Families for TMLHE-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMLHE-AS1 Gene

Function for TMLHE-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMLHE-AS1 Gene

Localization for TMLHE-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMLHE-AS1 Gene

Pathways & Interactions for TMLHE-AS1 Gene

SuperPathways for TMLHE-AS1 Gene

No Data Available

Interacting Proteins for TMLHE-AS1 Gene

Gene Ontology (GO) - Biological Process for TMLHE-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMLHE-AS1 Gene

Drugs & Compounds for TMLHE-AS1 Gene

No Compound Related Data Available

Transcripts for TMLHE-AS1 Gene

mRNA/cDNA for TMLHE-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMLHE-AS1 Gene

No ASD Table

Relevant External Links for TMLHE-AS1 Gene

GeneLoc Exon Structure for
TMLHE-AS1
ECgene alternative splicing isoforms for
TMLHE-AS1

Expression for TMLHE-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMLHE-AS1 Gene

SOURCE GeneReport for Unigene cluster for TMLHE-AS1 Gene:

Hs.638368
genes like me logo Genes that share expression patterns with TMLHE-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMLHE-AS1 Gene

Orthologs for TMLHE-AS1 Gene

Evolution for TMLHE-AS1 Gene

ENSEMBL:
Gene Tree for TMLHE-AS1 (if available)
TreeFam:
Gene Tree for TMLHE-AS1 (if available)

No data available for Orthologs for TMLHE-AS1 Gene

Paralogs for TMLHE-AS1 Gene

No data available for Paralogs for TMLHE-AS1 Gene

Variants for TMLHE-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMLHE-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs782001959 risk-factor, Autism, susceptibility to, X-linked 6 155,492,384(+) C/A intron_variant
rs1031480 -- 155,471,781(+) C/A/G/T intron_variant
rs10871880 -- 155,470,903(+) A/T intron_variant
rs111249987 -- 155,483,845(+) G/T intron_variant
rs111299984 -- 155,482,901(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for TMLHE-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv2549e212 CNV gain 25503493
esv29972 CNV gain 17803354
esv33784 CNV gain+loss 17666407
esv3577574 CNV gain 25503493
nsv1150243 CNV duplication 26484159
nsv1151265 CNV duplication 26484159
nsv499361 OTHER inversion 21111241
nsv508817 CNV insertion 20534489
nsv7470 OTHER inversion 18451855

Additional Variant Information for TMLHE-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMLHE-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMLHE-AS1 Gene

Disorders for TMLHE-AS1 Gene

Additional Disease Information for TMLHE-AS1

No disorders were found for TMLHE-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMLHE-AS1 Gene

Publications for TMLHE-AS1 Gene

No publications were found for TMLHE-AS1 Gene.

Products for TMLHE-AS1 Gene

Sources for TMLHE-AS1 Gene

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