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Aliases for TMEM97P1 Gene

Subcategory (RNA class) for TMEM97P1 Gene

lncRNA

Aliases for TMEM97P1 Gene

  • Transmembrane Protein 97 Pseudogene 1 2 3 5

External Ids for TMEM97P1 Gene

ORGUL Members for TMEM97P1 Gene

Previous GeneCards Identifiers for TMEM97P1 Gene

  • GC00U931880
  • GC21P045205

Summaries for TMEM97P1 Gene

GeneCards Summary for TMEM97P1 Gene

TMEM97P1 (Transmembrane Protein 97 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM97P1 Gene

Genomics for TMEM97P1 Gene

Regulatory Elements for TMEM97P1 Gene

Enhancers for TMEM97P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F043974 1.2 Ensembl ENCODE 11.6 +192.4 192406 1.0 YBX3 HDGF NFRKB INSM2 NFXL1 YBX1 GLI4 RAD21 ZNF143 ZNF207 AATBC RNU6-859P AGPAT3 TRAPPC10 TMEM97P1 RRP1 PIR42091 LOC105372829
GH21F043834 1.1 Ensembl ENCODE 12.4 +52.0 52022 1.4 HDAC1 TFAP4 USF1 SAP130 MLX CREB3L1 MAX SIN3A GLIS2 ZFHX2 RRP1 AATBC AGPAT3 TMEM97P1 RNU6-859P CSTB PDXK GC21M043858
GH21F043839 0.5 ENCODE 12.4 +56.0 56006 0.1 MTA2 TARDBP IKZF1 AGPAT3 AATBC RRP1 TMEM97P1 RNU6-859P PDXK GC21M043858
GH21F043782 1.5 FANTOM5 Ensembl ENCODE 0.8 0.0 -9 1.7 ATF1 MLX ARID4B DMAP1 YY1 SLC30A9 FOS SP5 MIER2 PPARG CSTB RRP1 AATBC LOC105372825 TMEM97P1
GH21F043781 0.5 Ensembl 0.8 -2.0 -1979 0.2 SCRT2 MLLT1 ATF2 LOC105372825 TMEM97P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMEM97P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM97P1 Gene

Chromosome:
21
Start:
43,783,079 bp from pter
End:
43,783,573 bp from pter
Size:
495 bases
Orientation:
Plus strand

Genomic View for TMEM97P1 Gene

Genes around TMEM97P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM97P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM97P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM97P1 Gene

Proteins for TMEM97P1 Gene

Post-translational modifications for TMEM97P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM97P1 Gene

Domains & Families for TMEM97P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM97P1 Gene

Function for TMEM97P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM97P1 Gene

Localization for TMEM97P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM97P1 Gene

Pathways & Interactions for TMEM97P1 Gene

SuperPathways for TMEM97P1 Gene

No Data Available

Interacting Proteins for TMEM97P1 Gene

Gene Ontology (GO) - Biological Process for TMEM97P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM97P1 Gene

Transcripts for TMEM97P1 Gene

mRNA/cDNA for TMEM97P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM97P1 Gene

No ASD Table

Relevant External Links for TMEM97P1 Gene

GeneLoc Exon Structure for
TMEM97P1
ECgene alternative splicing isoforms for
TMEM97P1

Expression for TMEM97P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMEM97P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMEM97P1 Gene:

TMEM97P1
genes like me logo Genes that share expression patterns with TMEM97P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMEM97P1 Gene

Orthologs for TMEM97P1 Gene

Evolution for TMEM97P1 Gene

ENSEMBL:
Gene Tree for TMEM97P1 (if available)
TreeFam:
Gene Tree for TMEM97P1 (if available)

No data available for Orthologs for TMEM97P1 Gene

Paralogs for TMEM97P1 Gene

No data available for Paralogs for TMEM97P1 Gene

Variants for TMEM97P1 Gene

Relevant External Links for TMEM97P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM97P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM97P1 Gene

Disorders for TMEM97P1 Gene

No disorders were found for TMEM97P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMEM97P1 Gene

Publications for TMEM97P1 Gene

No publications were found for TMEM97P1 Gene.

Products for TMEM97P1 Gene

Sources for TMEM97P1 Gene

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