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Aliases for TMEM8A Gene

Aliases for TMEM8A Gene

  • Transmembrane Protein 6 2 3 4
  • Transmembrane Protein 8 (Five Membrane-Spanning Domains) 2 3
  • Transmembrane Protein 8A 2 3
  • TMEM6 3 4
  • TMEM8 3 4
  • Five-Span Transmembrane Protein M83 3
  • Transmembrane Protein 8 4
  • Protein M83 4
  • M83 3

External Ids for TMEM8A Gene

Previous HGNC Symbols for TMEM8A Gene

  • TMEM6
  • TMEM8

Summaries for TMEM8A Gene

GeneCards Summary for TMEM8A Gene

TMEM8A is a Protein Coding gene. An important paralog of this gene is TMEM8C.

UniProtKB/Swiss-Prot for TMEM8A Gene

  • May be a cell surface adhesion molecule. May be involved in the maintenance of the resting T-cell state

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM8A Gene

Genomics for TMEM8A Gene

Genomic Location for TMEM8A Gene

Start:
370,773 bp from pter
End:
387,113 bp from pter
Size:
16,341 bases
Orientation:
Minus strand

Genomic View for TMEM8A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM8A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM8A Gene

No data available for Regulatory Elements for TMEM8A Gene

Proteins for TMEM8A Gene

  • Protein details for TMEM8A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9HCN3-TMM8A_HUMAN
    Recommended name:
    Transmembrane protein 8A
    Protein Accession:
    Q9HCN3
    Secondary Accessions:
    • D3DU49
    • Q4TT35
    • Q8WU24
    • Q96S25
    • Q9BR03
    • Q9BT97
    • Q9H7B9

    Protein attributes for TMEM8A Gene

    Size:
    771 amino acids
    Molecular mass:
    84761 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14975.1; Type=Erroneous termination; Positions=750; Note=Translated as Ser.; Evidence={ECO:0000305};

neXtProt entry for TMEM8A Gene

Proteomics data for TMEM8A Gene at MOPED

Post-translational modifications for TMEM8A Gene

Other Protein References for TMEM8A Gene

No data available for DME Specific Peptides for TMEM8A Gene

Domains for TMEM8A Gene

Protein Domains for TMEM8A Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM8A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9HCN3

UniProtKB/Swiss-Prot:

TMM8A_HUMAN :
  • Q9HCN3
Domain:
  • Contains 1 EGF-like domain.
Family:
  • Belongs to the TMEM8 family.
genes like me logo Genes that share domains with TMEM8A: view

No data available for Gene Families for TMEM8A Gene

Function for TMEM8A Gene

Molecular function for TMEM8A Gene

UniProtKB/Swiss-Prot Function: May be a cell surface adhesion molecule. May be involved in the maintenance of the resting T-cell state
UniProtKB/Swiss-Prot Induction: Repressed during activation of CD4+ and CD8+ T-lymphocytes

Gene Ontology (GO) - Molecular Function for TMEM8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with TMEM8A: view

Phenotypes for TMEM8A Gene

GenomeRNAi human phenotypes for TMEM8A:
genes like me logo Genes that share phenotypes with TMEM8A: view

miRNA for TMEM8A Gene

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for TMEM8A Gene

Localization for TMEM8A Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM8A Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM8A Gene COMPARTMENTS Subcellular localization image for TMEM8A gene
Compartment Confidence
plasma membrane 5
nucleus 1

Gene Ontology (GO) - Cellular Components for TMEM8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005765 lysosomal membrane IDA 17897319
GO:0005886 plasma membrane IBA --
GO:0005887 integral component of plasma membrane NAS 11006113
GO:0016021 integral component of membrane --
GO:0070062 extracellular exosome IDA 23533145
genes like me logo Genes that share ontologies with TMEM8A: view

Pathways for TMEM8A Gene

SuperPathways for TMEM8A Gene

No Data Available

Interacting Proteins for TMEM8A Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000401338%0d%0a9606.ENSP00000295025%0d%0a9606.ENSP00000369445%0d%0a
Selected Interacting proteins: ENSP00000401338 Q9HCN3-TMM8A_HUMAN for TMEM8A Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for TMEM8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007155 cell adhesion IEA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with TMEM8A: view

No data available for Pathways by source for TMEM8A Gene

Transcripts for TMEM8A Gene

Unigene Clusters for TMEM8A Gene

Transmembrane protein 8A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM8A Gene

No ASD Table

Relevant External Links for TMEM8A Gene

GeneLoc Exon Structure for
TMEM8A
ECgene alternative splicing isoforms for
TMEM8A

Expression for TMEM8A Gene

mRNA expression in normal human tissues for TMEM8A Gene

mRNA differential expression in normal tissues according to GTEx for TMEM8A Gene

This gene is overexpressed in Whole Blood (6.3).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for TMEM8A Gene

SOURCE GeneReport for Unigene cluster for TMEM8A Gene Hs.288940

mRNA Expression by UniProt/SwissProt for TMEM8A Gene

Q9HCN3-TMM8A_HUMAN
Tissue specificity: Expressed in pancreas, placenta, spleen, liver, kidney, bone marrow, peripheral blood leukocytes and tonsil.
genes like me logo Genes that share expressions with TMEM8A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for TMEM8A Gene

Orthologs for TMEM8A Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM8A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM8A 35
  • 98.96 (n)
  • 98.96 (a)
TMEM8A 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM8 36
  • 73 (a)
OneToOne
TMEM8A 35
  • 81.88 (n)
  • 73.96 (a)
dog
(Canis familiaris)
Mammalia TMEM8A 35
  • 81.3 (n)
  • 75.54 (a)
TMEM8A 36
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem8 35
  • 79.89 (n)
  • 76.07 (a)
Tmem8 16
Tmem8 36
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM8A 36
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 56 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Tmem8a 35
  • 79.71 (n)
  • 76.07 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 55 (a)
OneToMany
-- 36
  • 55 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia TMEM8A 36
  • 51 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii tmem8a 36
  • 43 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG13654 36
  • 17 (a)
OneToMany
Species with no ortholog for TMEM8A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMEM8A Gene

ENSEMBL:
Gene Tree for TMEM8A (if available)
TreeFam:
Gene Tree for TMEM8A (if available)

Paralogs for TMEM8A Gene

Paralogs for TMEM8A Gene

Selected SIMAP similar genes for TMEM8A Gene using alignment to 5 proteins:

genes like me logo Genes that share paralogs with TMEM8A: view

Variants for TMEM8A Gene

Sequence variations from dbSNP and Humsavar for TMEM8A Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs374847 -- 378,152(+) CACCC(G/T)GACTG intron-variant
rs387590 -- 378,386(-) gcagt(C/G)cgggt intron-variant
rs410973 -- 375,549(+) ttttt(C/T)tgaga intron-variant
rs439250 -- 378,415(-) ggtgg(C/G)gatgg intron-variant
rs440035 -- 378,350(-) cagtg(C/T)gggtg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM8A Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
nsv904652 CNV Loss 21882294
dgv32n68 CNV Loss 17160897
dgv2466n71 CNV Loss 21882294
dgv2469n71 CNV Loss 21882294
dgv2472n71 CNV Loss 21882294
dgv2473n71 CNV Loss 21882294
nsv904699 CNV Loss 21882294
nsv904700 CNV Loss 21882294
nsv904707 CNV Loss 21882294
nsv517471 CNV Loss 19592680
nsv827478 CNV Gain 20364138
dgv2474n71 CNV Loss 21882294
nsv904709 CNV Gain+Loss 21882294
nsv904711 CNV Loss 21882294
esv33562 CNV Loss 17666407

Relevant External Links for TMEM8A Gene

HapMap Linkage Disequilibrium report
TMEM8A
Human Gene Mutation Database (HGMD)
TMEM8A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM8A Gene

Disorders for TMEM8A Gene

No disorders were found for TMEM8A Gene.

No data available for UniProtKB/Swiss-Prot for TMEM8A Gene

Publications for TMEM8A Gene

  1. Molecular cloning and chromosomal mapping of a novel five-span transmembrane protein gene, M83. (PMID: 11006113) Motohashi T. … Nakauchi H. (Biochem. Biophys. Res. Commun. 2000) 2 3 4 23
  2. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3 4

Products for TMEM8A Gene

  • antibodies-online proteins for TMEM8A
  • antibodies-online antibodies for TMEM8A
  • antibodies-online kits for TMEM8A

Sources for TMEM8A Gene

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