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Aliases for TMEM82 Gene

Aliases for TMEM82 Gene

  • Transmembrane Protein 82 2 3

External Ids for TMEM82 Gene

Summaries for TMEM82 Gene

GeneCards Summary for TMEM82 Gene

TMEM82 is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM82 Gene

Genomics for TMEM82 Gene

Genomic Location for TMEM82 Gene

Start:
15,742,422 bp from pter
End:
15,747,982 bp from pter
Size:
5,561 bases
Orientation:
Plus strand

Genomic View for TMEM82 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM82 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM82 Gene

Regulatory Elements for TMEM82 Gene

Transcription factor binding sites by QIAGEN in the TMEM82 gene promoter:

Proteins for TMEM82 Gene

  • Protein details for TMEM82 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0PJX8-TMM82_HUMAN
    Recommended name:
    Transmembrane protein 82
    Protein Accession:
    A0PJX8
    Secondary Accessions:
    • B2RP27
    • Q5VVD4

    Protein attributes for TMEM82 Gene

    Size:
    343 amino acids
    Molecular mass:
    37222 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TMEM82 Gene

Proteomics data for TMEM82 Gene at MOPED

Post-translational modifications for TMEM82 Gene

No Post-translational modifications

Other Protein References for TMEM82 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM82 Gene

Domains for TMEM82 Gene

Protein Domains for TMEM82 Gene

ProtoNet:

UniProtKB/Swiss-Prot:

TMM82_HUMAN
Family:
  • Belongs to the TMEM82 family.:
    • A0PJX8
genes like me logo Genes that share domains with TMEM82: view

No data available for Gene Families for TMEM82 Gene

Function for TMEM82 Gene

Phenotypes for TMEM82 Gene

GenomeRNAi human phenotypes for TMEM82:
genes like me logo Genes that share phenotypes with TMEM82: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMEM82 Gene

Localization for TMEM82 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM82 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM82 Gene COMPARTMENTS Subcellular localization image for TMEM82 gene
Compartment Confidence
plasma membrane 3

Gene Ontology (GO) - Cellular Components for TMEM82 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM82: view

Pathways for TMEM82 Gene

SuperPathways for TMEM82 Gene

No Data Available

Interacting Proteins for TMEM82 Gene

Gene Ontology (GO) - Biological Process for TMEM82 Gene

None

No data available for Pathways by source for TMEM82 Gene

Transcripts for TMEM82 Gene

mRNA/cDNA for TMEM82 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(370) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM82 Gene

Transmembrane protein 82:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM82 Gene

No ASD Table

Relevant External Links for TMEM82 Gene

GeneLoc Exon Structure for
TMEM82
ECgene alternative splicing isoforms for
TMEM82

Expression for TMEM82 Gene

mRNA expression in normal human tissues for TMEM82 Gene

mRNA differential expression in normal tissues according to GTEx for TMEM82 Gene

This gene is overexpressed in Liver (26.8), Kidney - Cortex (10.4), Small Intestine - Terminal Ileum (7.3), and Colon - Transverse (6.4).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TMEM82 Gene

SOURCE GeneReport for Unigene cluster for TMEM82 Gene Hs.454828

genes like me logo Genes that share expressions with TMEM82: view

Orthologs for TMEM82 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TMEM82 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM82 36
  • 99.09 (n)
  • 98.98 (a)
TMEM82 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM82 36
  • 86.43 (n)
  • 81.74 (a)
TMEM82 37
  • 74 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM82 36
  • 84.65 (n)
  • 80.65 (a)
TMEM82 37
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem82 36
  • 80.6 (n)
  • 80.12 (a)
Tmem82 16
Tmem82 37
  • 76 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM82 37
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM82 37
  • 69 (a)
OneToOne
chicken
(Gallus gallus)
Aves TMEM82 36
  • 66.77 (n)
  • 63.29 (a)
TMEM82 37
  • 60 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TMEM82 37
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.4345 36
tmem82 36
  • 66.46 (n)
  • 59.37 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC568809 36
  • 52.63 (n)
  • 50 (a)
TMEM82 37
  • 43 (a)
OneToOne
Species with no ortholog for TMEM82:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMEM82 Gene

ENSEMBL:
Gene Tree for TMEM82 (if available)
TreeFam:
Gene Tree for TMEM82 (if available)

Paralogs for TMEM82 Gene

No data available for Paralogs for TMEM82 Gene

Variants for TMEM82 Gene

Sequence variations from dbSNP and Humsavar for TMEM82 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1969241 -- 15,746,242(+) acttt(C/G)ggagg intron-variant
rs7511651 -- 15,744,376(+) GCCAG(C/T)GCTAC reference, missense
rs7525747 -- 15,744,417(+) GCACA(C/T)GGCCT synonymous-codon, reference
rs7533907 -- 15,744,654(+) GCCGA(C/G)AGCCA intron-variant
rs10927844 -- 15,742,120(+) GACAG(A/G)GTTTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TMEM82 Gene

Variant ID Type Subtype PubMed ID
dgv171n71 CNV Gain 21882294
nsv524044 CNV Loss 19592680
dgv11n27 CNV Gain 19166990
dgv172n71 CNV Gain 21882294
nsv508925 CNV Insertion 20534489
dgv173n71 CNV Loss 21882294
nsv871462 CNV Gain+Loss 21882294
nsv871550 CNV Loss 21882294
nsv870503 CNV Loss 21882294

Relevant External Links for TMEM82 Gene

HapMap Linkage Disequilibrium report
TMEM82

Disorders for TMEM82 Gene

No disorders were found for TMEM82 Gene.

No data available for UniProtKB/Swiss-Prot for TMEM82 Gene

Publications for TMEM82 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for TMEM82 Gene

Sources for TMEM82 Gene

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