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Aliases for TMEM72-AS1 Gene

Subcategory (RNA class) for TMEM72-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMEM72-AS1 Gene

  • TMEM72 Antisense RNA 1 2 3 5
  • TMEM72 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TMEM72-AS1 Gene

Previous GeneCards Identifiers for TMEM72-AS1 Gene

  • GC10M045308

Summaries for TMEM72-AS1 Gene

GeneCards Summary for TMEM72-AS1 Gene

TMEM72-AS1 (TMEM72 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM72-AS1 Gene

Genomics for TMEM72-AS1 Gene

Regulatory Elements for TMEM72-AS1 Gene

Promoters for TMEM72-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TMEM72-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM72-AS1 Gene

Chromosome:
10
Start:
44,811,024 bp from pter
End:
44,959,689 bp from pter
Size:
148,666 bases
Orientation:
Minus strand

Genomic View for TMEM72-AS1 Gene

Genes around TMEM72-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM72-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM72-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM72-AS1 Gene

Proteins for TMEM72-AS1 Gene

Post-translational modifications for TMEM72-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM72-AS1 Gene

Domains & Families for TMEM72-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM72-AS1 Gene

Function for TMEM72-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM72-AS1 Gene

Localization for TMEM72-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM72-AS1 Gene

Pathways & Interactions for TMEM72-AS1 Gene

SuperPathways for TMEM72-AS1 Gene

No Data Available

Interacting Proteins for TMEM72-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM72-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM72-AS1 Gene

Drugs & Compounds for TMEM72-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM72-AS1 Gene

mRNA/cDNA for TMEM72-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM72-AS1 Gene

TMEM72 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM72-AS1 Gene

No ASD Table

Relevant External Links for TMEM72-AS1 Gene

GeneLoc Exon Structure for
TMEM72-AS1
ECgene alternative splicing isoforms for
TMEM72-AS1

Expression for TMEM72-AS1 Gene

mRNA expression in normal human tissues for TMEM72-AS1 Gene

SOURCE GeneReport for Unigene cluster for TMEM72-AS1 Gene Hs.568801

genes like me logo Genes that share expression patterns with TMEM72-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TMEM72-AS1 Gene

Orthologs for TMEM72-AS1 Gene

Evolution for TMEM72-AS1 Gene

ENSEMBL:
Gene Tree for TMEM72-AS1 (if available)
TreeFam:
Gene Tree for TMEM72-AS1 (if available)

No data available for Orthologs for TMEM72-AS1 Gene

Paralogs for TMEM72-AS1 Gene

No data available for Paralogs for TMEM72-AS1 Gene

Variants for TMEM72-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM72-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs879073 -- 44,904,434(+) GCAGG(C/G)GCTGC intron-variant
rs879074 -- 44,904,605(+) CTTTG(A/G)ATAAT intron-variant
rs879075 -- 44,904,204(+) ATTCA(A/T)ATACA intron-variant
rs879343 -- 44,905,259(-) TCCTC(A/C/T)GCCAT intron-variant
rs879344 -- 44,905,219(-) CCTCT(C/G)TGTCA intron-variant

Relevant External Links for TMEM72-AS1 Gene

HapMap Linkage Disequilibrium report
TMEM72-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM72-AS1 Gene

Disorders for TMEM72-AS1 Gene

Relevant External Links for TMEM72-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM72-AS1

No disorders were found for TMEM72-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM72-AS1 Gene

Publications for TMEM72-AS1 Gene

  1. Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema. (PMID: 20709820) Kong X. … Pillai S.G. (Am. J. Respir. Crit. Care Med. 2011) 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for TMEM72-AS1 Gene

Sources for TMEM72-AS1 Gene

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