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Aliases for TMEM65 Gene

Aliases for TMEM65 Gene

  • Transmembrane Protein 65 2 3

External Ids for TMEM65 Gene

Previous GeneCards Identifiers for TMEM65 Gene

  • GC08M125394
  • GC08M120650

Summaries for TMEM65 Gene

GeneCards Summary for TMEM65 Gene

TMEM65 (Transmembrane Protein 65) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM65 Gene

Genomics for TMEM65 Gene

Regulatory Elements for TMEM65 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for TMEM65 Gene

Chromosome:
8
Start:
124,306,189 bp from pter
End:
124,372,699 bp from pter
Size:
66,511 bases
Orientation:
Minus strand

Genomic View for TMEM65 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TMEM65 Gene

Proteins for TMEM65 Gene

  • Protein details for TMEM65 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6PI78-TMM65_HUMAN
    Recommended name:
    Transmembrane protein 65
    Protein Accession:
    Q6PI78
    Secondary Accessions:
    • Q8N5G8
    • Q8WVK5

    Protein attributes for TMEM65 Gene

    Size:
    240 amino acids
    Molecular mass:
    25498 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH32396.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for TMEM65 Gene

Proteomics data for TMEM65 Gene at MOPED

Post-translational modifications for TMEM65 Gene

No Post-translational modifications

Other Protein References for TMEM65 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for TMEM65 Gene

Domains & Families for TMEM65 Gene

Protein Domains for TMEM65 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM65 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM65: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TMEM65 Gene

Function for TMEM65 Gene

Phenotypes for TMEM65 Gene

genes like me logo Genes that share phenotypes with TMEM65: view

Animal Model Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMEM65

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for TMEM65 Gene

Localization for TMEM65 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM65 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM65 Gene COMPARTMENTS Subcellular localization image for TMEM65 gene
Compartment Confidence
mitochondrion 2
nucleus 2

Gene Ontology (GO) - Cellular Components for TMEM65 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM65: view

Pathways & Interactions for TMEM65 Gene

SuperPathways for TMEM65 Gene

No Data Available

Interacting Proteins for TMEM65 Gene

Gene Ontology (GO) - Biological Process for TMEM65 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM65 Gene

Drugs & Compounds for TMEM65 Gene

No Compound Related Data Available

Transcripts for TMEM65 Gene

mRNA/cDNA for TMEM65 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(62) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM65 Gene

Transmembrane protein 65:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMEM65

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM65 Gene

No ASD Table

Relevant External Links for TMEM65 Gene

GeneLoc Exon Structure for
TMEM65
ECgene alternative splicing isoforms for
TMEM65

Expression for TMEM65 Gene

mRNA expression in normal human tissues for TMEM65 Gene

Protein differential expression in normal tissues from HIPED for TMEM65 Gene

This gene is overexpressed in Nasal epithelium (23.7) and Brain (9.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for TMEM65 Gene



SOURCE GeneReport for Unigene cluster for TMEM65 Gene Hs.187646

genes like me logo Genes that share expression patterns with TMEM65: view

Protein tissue co-expression partners for TMEM65 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TMEM65 Gene

Orthologs for TMEM65 Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM65 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia TMEM65 35
  • 94.63 (n)
  • 94.92 (a)
TMEM65 36
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM65 35
  • 96.05 (n)
  • 96.61 (a)
TMEM65 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem65 35
  • 89.46 (n)
  • 91.03 (a)
Tmem65 16
Tmem65 36
  • 94 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia TMEM65 35
  • 99.63 (n)
  • 100 (a)
TMEM65 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem65 35
  • 89.74 (n)
  • 90.6 (a)
oppossum
(Monodelphis domestica)
Mammalia TMEM65 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM65 36
  • 83 (a)
OneToOne
chicken
(Gallus gallus)
Aves TMEM65 35
  • 84.66 (n)
  • 87.5 (a)
TMEM65 36
  • 84 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TMEM65 36
  • 72 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem65 35
  • 74.82 (n)
  • 80.98 (a)
African clawed frog
(Xenopus laevis)
Amphibia Xl.13983 35
zebrafish
(Danio rerio)
Actinopterygii tmem65 35
  • 64.29 (n)
  • 67.58 (a)
tmem65 36
  • 60 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.6265 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009021 35
  • 48.75 (n)
  • 45.66 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG17715 36
  • 27 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea tag-321 36
  • 38 (a)
OneToOne
Species with no ortholog for TMEM65:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TMEM65 Gene

ENSEMBL:
Gene Tree for TMEM65 (if available)
TreeFam:
Gene Tree for TMEM65 (if available)

Paralogs for TMEM65 Gene

No data available for Paralogs for TMEM65 Gene

Variants for TMEM65 Gene

Sequence variations from dbSNP and Humsavar for TMEM65 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs1132317 -- 124,306,305(-) TGATC(A/G)AATGC utr-variant-3-prime
rs4131904 -- 124,319,488(+) ATATT(A/G)TATTC intron-variant
rs4257990 -- 124,335,497(+) actgt(C/G)taatg intron-variant
rs4316136 -- 124,307,749(+) acaga(A/C)gaggc intron-variant
rs4351403 -- 124,351,897(+) ttcag(C/T)atttt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM65 Gene

Variant ID Type Subtype PubMed ID
nsv521356 CNV Loss 19592680
nsv516190 CNV Loss 19592680
nsv527751 CNV Loss 19592680
esv2669472 CNV Deletion 23128226

Variation tolerance for TMEM65 Gene

Residual Variation Intolerance Score: 46.31% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.30; 6.64% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TMEM65 Gene

HapMap Linkage Disequilibrium report
TMEM65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM65 Gene

Disorders for TMEM65 Gene

Relevant External Links for TMEM65

Genetic Association Database (GAD)
TMEM65
Human Genome Epidemiology (HuGE) Navigator
TMEM65
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM65
genes like me logo Genes that share disorders with TMEM65: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM65 Gene

Publications for TMEM65 Gene

  1. TMEM65 is a mitochondrial inner-membrane protein. (PMID: 24765583) Nishimura N. … Yano M. (PeerJ 2014) 2 67
  2. N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome A.S. … Carapito C. (Proteomics 2015) 67
  3. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 67
  4. Initial characterization of the human central proteome. (PMID: 21269460) Burkard T.R. … Colinge J. (BMC Syst. Biol. 2011) 67
  5. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 67

Products for TMEM65 Gene

Sources for TMEM65 Gene

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