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Aliases for TMEM5-AS1 Gene

Subcategory (RNA class) for TMEM5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMEM5-AS1 Gene

  • TMEM5 Antisense RNA 1 2 3 5

External Ids for TMEM5-AS1 Gene

Previous GeneCards Identifiers for TMEM5-AS1 Gene

  • GC12M064203
  • GC00U935938

Summaries for TMEM5-AS1 Gene

GeneCards Summary for TMEM5-AS1 Gene

TMEM5-AS1 (TMEM5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM5-AS1 Gene

Genomics for TMEM5-AS1 Gene

Regulatory Elements for TMEM5-AS1 Gene

Enhancers for TMEM5-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TMEM5-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for TMEM5-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TMEM5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM5-AS1 Gene

Chromosome:
12
Start:
63,808,845 bp from pter
End:
63,822,156 bp from pter
Size:
13,312 bases
Orientation:
Minus strand

Genomic View for TMEM5-AS1 Gene

Genes around TMEM5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM5-AS1 Gene

Proteins for TMEM5-AS1 Gene

Post-translational modifications for TMEM5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM5-AS1 Gene

Domains & Families for TMEM5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM5-AS1 Gene

Function for TMEM5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM5-AS1 Gene

Localization for TMEM5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM5-AS1 Gene

Pathways & Interactions for TMEM5-AS1 Gene

SuperPathways for TMEM5-AS1 Gene

No Data Available

Interacting Proteins for TMEM5-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM5-AS1 Gene

Drugs & Compounds for TMEM5-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM5-AS1 Gene

mRNA/cDNA for TMEM5-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM5-AS1 Gene

No ASD Table

Relevant External Links for TMEM5-AS1 Gene

GeneLoc Exon Structure for
TMEM5-AS1
ECgene alternative splicing isoforms for
TMEM5-AS1

Expression for TMEM5-AS1 Gene

mRNA expression in normal human tissues for TMEM5-AS1 Gene

genes like me logo Genes that share expression patterns with TMEM5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TMEM5-AS1 Gene

Orthologs for TMEM5-AS1 Gene

Evolution for TMEM5-AS1 Gene

ENSEMBL:
Gene Tree for TMEM5-AS1 (if available)
TreeFam:
Gene Tree for TMEM5-AS1 (if available)

No data available for Orthologs for TMEM5-AS1 Gene

Paralogs for TMEM5-AS1 Gene

No data available for Paralogs for TMEM5-AS1 Gene

Variants for TMEM5-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM5-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs7294691 -- 63,823,639(+) ATGTT(G/T)GTATC upstream-variant-2KB
rs7308850 -- 63,821,849(+) ACACC(A/G)TTCTG intron-variant
rs17120479 -- 63,812,860(+) AGCAT(A/G)ACAAA intron-variant
rs2336001 -- 63,810,671(-) TTAAC(C/T)TACAC intron-variant
rs34070191 -- 63,819,260(+) AATAA(C/T)AGAGA intron-variant

Relevant External Links for TMEM5-AS1 Gene

HapMap Linkage Disequilibrium report
TMEM5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM5-AS1 Gene

Disorders for TMEM5-AS1 Gene

Relevant External Links for TMEM5-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM5-AS1

No disorders were found for TMEM5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM5-AS1 Gene

Publications for TMEM5-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for TMEM5-AS1 Gene

Sources for TMEM5-AS1 Gene

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