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Aliases for TMEM44-AS1 Gene

Subcategory (RNA class) for TMEM44-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for TMEM44-AS1 Gene

  • TMEM44 Antisense RNA 1 2 3
  • TMEM44 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TMEM44-AS1 Gene

Previous GeneCards Identifiers for TMEM44-AS1 Gene

  • GC03P194306

Summaries for TMEM44-AS1 Gene

GeneCards Summary for TMEM44-AS1 Gene

TMEM44-AS1 (TMEM44 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM44-AS1 Gene

Genomics for TMEM44-AS1 Gene

Genomic Location for TMEM44-AS1 Gene

Start:
194,584,011 bp from pter
End:
194,590,832 bp from pter
Size:
6,822 bases
Orientation:
Plus strand

Genomic View for TMEM44-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM44-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM44-AS1 Gene

No data available for Regulatory Elements for TMEM44-AS1 Gene

Proteins for TMEM44-AS1 Gene

Post-translational modifications for TMEM44-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM44-AS1 Gene

Domains for TMEM44-AS1 Gene

Gene Families for TMEM44-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM44-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM44-AS1 Gene

Function for TMEM44-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMEM44-AS1 Gene

Localization for TMEM44-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM44-AS1 Gene

Pathways for TMEM44-AS1 Gene

SuperPathways for TMEM44-AS1 Gene

No Data Available

Interacting Proteins for TMEM44-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM44-AS1 Gene

None

No data available for Pathways by source for TMEM44-AS1 Gene

Transcripts for TMEM44-AS1 Gene

mRNA/cDNA for TMEM44-AS1 Gene

(5) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM44-AS1 Gene

TMEM44 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM44-AS1 Gene

No ASD Table

Relevant External Links for TMEM44-AS1 Gene

GeneLoc Exon Structure for
TMEM44-AS1
ECgene alternative splicing isoforms for
TMEM44-AS1

Expression for TMEM44-AS1 Gene

mRNA expression in normal human tissues for TMEM44-AS1 Gene

SOURCE GeneReport for Unigene cluster for TMEM44-AS1 Gene Hs.586059

genes like me logo Genes that share expressions with TMEM44-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TMEM44-AS1 Gene

Orthologs for TMEM44-AS1 Gene

Evolution for TMEM44-AS1 Gene

ENSEMBL:
Gene Tree for TMEM44-AS1 (if available)
TreeFam:
Gene Tree for TMEM44-AS1 (if available)

No data available for Orthologs for TMEM44-AS1 Gene

Paralogs for TMEM44-AS1 Gene

No data available for Paralogs for TMEM44-AS1 Gene

Variants for TMEM44-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM44-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs6766490 -- 194,583,215(+) cgccc(A/G)cctca upstream-variant-2KB
rs6775804 -- 194,583,061(+) CTCGC(C/G)GGTTC upstream-variant-2KB
rs6784060 -- 194,583,330(+) CATCA(C/T)AAACC upstream-variant-2KB
rs7619917 -- 194,585,318(+) ccagc(A/G)ctttg intron-variant
rs7628688 -- 194,585,363(+) agttc(C/G)agatc intron-variant

Relevant External Links for TMEM44-AS1 Gene

HapMap Linkage Disequilibrium report
TMEM44-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TMEM44-AS1 Gene

Disorders for TMEM44-AS1 Gene

No disorders were found for TMEM44-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TMEM44-AS1 Gene

Publications for TMEM44-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for TMEM44-AS1 Gene

Sources for TMEM44-AS1 Gene

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