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Aliases for TMEM232 Gene

Aliases for TMEM232 Gene

  • Transmembrane Protein 232 2 3

External Ids for TMEM232 Gene

Previous GeneCards Identifiers for TMEM232 Gene

  • GC05M109755
  • GC05M109624
  • GC05M104934

Summaries for TMEM232 Gene

GeneCards Summary for TMEM232 Gene

TMEM232 (Transmembrane Protein 232) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM232 Gene

Genomics for TMEM232 Gene

Genomic Location for TMEM232 Gene

Start:
110,289,233 bp from pter
End:
110,738,956 bp from pter
Size:
449,724 bases
Orientation:
Minus strand

Genomic View for TMEM232 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM232 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM232 Gene

No data available for Regulatory Elements for TMEM232 Gene

Proteins for TMEM232 Gene

  • Protein details for TMEM232 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JQI7-TM232_HUMAN
    Recommended name:
    Transmembrane protein 232
    Protein Accession:
    C9JQI7
    Secondary Accessions:
    • B4DKF4

    Protein attributes for TMEM232 Gene

    Size:
    657 amino acids
    Molecular mass:
    76453 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TMEM232 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TMEM232 Gene

Proteomics data for TMEM232 Gene at MOPED

Post-translational modifications for TMEM232 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TMEM232 Gene

No data available for DME Specific Peptides for TMEM232 Gene

Domains for TMEM232 Gene

Protein Domains for TMEM232 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TMEM232 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM232: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TMEM232 Gene

Function for TMEM232 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMEM232 Gene

Localization for TMEM232 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM232 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM232 Gene COMPARTMENTS Subcellular localization image for TMEM232 gene
Compartment Confidence
plasma membrane 3
peroxisome 2

Gene Ontology (GO) - Cellular Components for TMEM232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM232: view

Pathways for TMEM232 Gene

SuperPathways for TMEM232 Gene

No Data Available

Interacting Proteins for TMEM232 Gene

Gene Ontology (GO) - Biological Process for TMEM232 Gene

None

No data available for Pathways by source for TMEM232 Gene

Transcripts for TMEM232 Gene

mRNA/cDNA for TMEM232 Gene

(20) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(13) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM232 Gene

Transmembrane protein 232:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMEM232

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for TMEM232
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM232 Gene

No ASD Table

Relevant External Links for TMEM232 Gene

GeneLoc Exon Structure for
TMEM232
ECgene alternative splicing isoforms for
TMEM232

Expression for TMEM232 Gene

mRNA expression in normal human tissues for TMEM232 Gene

mRNA differential expression in normal tissues according to GTEx for TMEM232 Gene

This gene is overexpressed in Testis (8.5).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TMEM232 Gene

SOURCE GeneReport for Unigene cluster for TMEM232 Gene Hs.729154

genes like me logo Genes that share expressions with TMEM232: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for TMEM232 Gene

Orthologs for TMEM232 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TMEM232 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM232 35
  • 96.46 (n)
  • 95.09 (a)
TMEM232 36
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM232 35
  • 81.61 (n)
  • 73.67 (a)
TMEM232 36
  • 75 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM232 35
  • 85.62 (n)
  • 77.9 (a)
TMEM232 36
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem232 35
  • 75.31 (n)
  • 67.66 (a)
Tmem232 16
Tmem232 36
  • 64 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM232 36
  • 45 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM232 36
  • 45 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem232 35
  • 73.55 (n)
  • 67.6 (a)
lizard
(Anolis carolinensis)
Reptilia TMEM232 36
  • 38 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem232 35
  • 55.25 (n)
  • 41.25 (a)
zebrafish
(Danio rerio)
Actinopterygii tmem232 35
  • 48.42 (n)
  • 34.75 (a)
tmem232 36
  • 31 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 20 (a)
OneToMany
-- 36
  • 36 (a)
OneToMany
Species with no ortholog for TMEM232:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMEM232 Gene

ENSEMBL:
Gene Tree for TMEM232 (if available)
TreeFam:
Gene Tree for TMEM232 (if available)

Paralogs for TMEM232 Gene

No data available for Paralogs for TMEM232 Gene

Variants for TMEM232 Gene

Sequence variations from dbSNP and Humsavar for TMEM232 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs27122 -- 110,725,436(-) TGTCC(A/G)TCCAG intron-variant
rs27123 -- 110,724,686(-) TTAGG(A/T)TGCCT intron-variant
rs27124 -- 110,724,419(-) TTATA(C/G/T)ACAGT intron-variant
rs151784 -- 110,720,556(-) tgact(C/T)atgcc intron-variant
rs152322 -- 110,733,564(-) ttgct(A/C)aggat intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM232 Gene

Variant ID Type Subtype PubMed ID
essv22481 CNV CNV 17122850
dgv1839e1 CNV Complex 17122850
nsv830445 CNV Gain 17160897
nsv882700 CNV Loss 21882294
nsv818375 CNV Loss 17921354
nsv882701 CNV Loss 21882294
esv34732 CNV Loss 17911159
dgv6292n71 CNV Loss 21882294
nsv10742 CNV Loss 18304495
esv2667285 CNV Deletion 23128226
nsv823172 CNV Loss 20364138
nsv10743 CNV Gain 18304495
nsv882705 CNV Loss 21882294
nsv525752 CNV Loss 19592680
esv269057 CNV Insertion 20981092
nsv4957 CNV Loss 18451855
nsv819920 CNV Gain 19587683
nsv830446 CNV Loss 17160897

Relevant External Links for TMEM232 Gene

HapMap Linkage Disequilibrium report
TMEM232

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM232 Gene

Disorders for TMEM232 Gene

(1) University of Copenhagen DISEASES for TMEM232 Gene

Relevant External Links for TMEM232

Genetic Association Database (GAD)
TMEM232
Human Genome Epidemiology (HuGE) Navigator
TMEM232
genes like me logo Genes that share disorders with TMEM232: view

No data available for UniProtKB/Swiss-Prot for TMEM232 Gene

Publications for TMEM232 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  3. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 48
  4. Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data. (PMID: 19584346) Vasan R.S. … Blankenberg S. (JAMA 2009) 3 48
  5. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 3

Products for TMEM232 Gene

Sources for TMEM232 Gene

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