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Aliases for TMEM220-AS1 Gene

Subcategory (RNA class) for TMEM220-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for TMEM220-AS1 Gene

  • TMEM220 Antisense RNA 1 2 3
  • CTC-297N7.5 3

External Ids for TMEM220-AS1 Gene

ORGUL Members for TMEM220-AS1 Gene

Summaries for TMEM220-AS1 Gene

GeneCards Summary for TMEM220-AS1 Gene

TMEM220-AS1 (TMEM220 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM220-AS1 Gene

Genomics for TMEM220-AS1 Gene

Genomic Location for TMEM220-AS1 Gene

Start:
10,729,777 bp from pter
End:
10,815,164 bp from pter
Size:
85,388 bases
Orientation:
Plus strand

Genomic View for TMEM220-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM220-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM220-AS1 Gene

No data available for Regulatory Elements for TMEM220-AS1 Gene

Proteins for TMEM220-AS1 Gene

Post-translational modifications for TMEM220-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM220-AS1 Gene

Domains for TMEM220-AS1 Gene

Gene Families for TMEM220-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with TMEM220-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for TMEM220-AS1 Gene

Function for TMEM220-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMEM220-AS1 Gene

Localization for TMEM220-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for TMEM220-AS1 Gene

Pathways for TMEM220-AS1 Gene

SuperPathways for TMEM220-AS1 Gene

No Data Available

Interacting Proteins for TMEM220-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM220-AS1 Gene

None

No data available for Pathways by source for TMEM220-AS1 Gene

Transcripts for TMEM220-AS1 Gene

mRNA/cDNA for TMEM220-AS1 Gene

(5) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM220-AS1 Gene

TMEM220 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM220-AS1 Gene

No ASD Table

Relevant External Links for TMEM220-AS1 Gene

GeneLoc Exon Structure for
TMEM220-AS1
ECgene alternative splicing isoforms for
TMEM220-AS1

Expression for TMEM220-AS1 Gene

mRNA expression in normal human tissues for TMEM220-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TMEM220-AS1 Gene

This gene is overexpressed in Liver (9.9).

SOURCE GeneReport for Unigene cluster for TMEM220-AS1 Gene Hs.569782

genes like me logo Genes that share expressions with TMEM220-AS1: view

Orthologs for TMEM220-AS1 Gene

Evolution for TMEM220-AS1 Gene

ENSEMBL:
Gene Tree for TMEM220-AS1 (if available)
TreeFam:
Gene Tree for TMEM220-AS1 (if available)

No data available for Orthologs for TMEM220-AS1 Gene

Paralogs for TMEM220-AS1 Gene

No data available for Paralogs for TMEM220-AS1 Gene

Variants for TMEM220-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM220-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs169341 -- 10,736,054(-) GGCCA(C/G)GTAGG intron-variant
rs202303 -- 10,737,379(-) TCACA(C/G/T)GCTTC intron-variant
rs202304 -- 10,735,091(-) gccac(C/T)gtgcc intron-variant
rs202305 -- 10,735,082(-) cctgg(A/C)taatt intron-variant
rs202306 -- 10,733,965(-) ACCTT(C/G)GGAGC intron-variant

Relevant External Links for TMEM220-AS1 Gene

HapMap Linkage Disequilibrium report
TMEM220-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for TMEM220-AS1 Gene

Disorders for TMEM220-AS1 Gene

No disorders were found for TMEM220-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for TMEM220-AS1 Gene

Publications for TMEM220-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for TMEM220-AS1 Gene

Sources for TMEM220-AS1 Gene

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