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Aliases for TMEM212-IT1 Gene

Subcategory (RNA class) for TMEM212-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMEM212-IT1 Gene

  • TMEM212 Intronic Transcript 1 2 3 5
  • TMEM212 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for TMEM212-IT1 Gene

Previous GeneCards Identifiers for TMEM212-IT1 Gene

  • GC00U933869
  • GC03P171613

Summaries for TMEM212-IT1 Gene

GeneCards Summary for TMEM212-IT1 Gene

TMEM212-IT1 (TMEM212 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM212-IT1 Gene

Genomics for TMEM212-IT1 Gene

Regulatory Elements for TMEM212-IT1 Gene

Enhancers for TMEM212-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F172078 1.2 Ensembl ENCODE 16.2 +184.7 184668 2.0 HDAC1 HDGF KLF17 YBX1 ZNF2 ZBTB40 CHAMP1 FOS PAF1 JUNB TMEM212-AS1 TMEM212-IT1 BZW1P1 FNDC3B RPS27AP8
GH03F171797 1.1 Ensembl ENCODE 16.3 -96.7 -96689 1.5 HDGF TBP CBX3 WRNIP1 KLF17 YBX1 ZNF2 CHAMP1 FOS SMARCA5 TMEM212-IT1 TMEM212-AS1 BZW1P1 TMEM212 PLD1 ENSG00000234594
GH03F172038 1.1 ENCODE 16.2 +146.7 146670 5.4 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 TMEM212-AS1 TMEM212-IT1 BZW1P1 FNDC3B RPS27AP8
GH03F171872 1.6 FANTOM5 Ensembl ENCODE 0.3 -19.3 -19296 5.1 ELF3 TBP PKNOX1 INSM2 SIN3A ZNF48 ZSCAN9 ZNF366 FOS SMARCC1 TMEM212 FNDC3B TMEM212-IT1
GH03F171878 1.3 FANTOM5 Ensembl ENCODE 0.3 -15.5 -15542 1.8 SOX13 PKNOX1 ESRRA ZNF644 RAD21 YY1 SCRT2 NR2F6 TCF7L2 PAF1 TMEM212 FNDC3B TMEM212-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMEM212-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM212-IT1 Gene

Chromosome:
3
Start:
171,894,436 bp from pter
End:
171,895,240 bp from pter
Size:
805 bases
Orientation:
Plus strand

Genomic View for TMEM212-IT1 Gene

Genes around TMEM212-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM212-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM212-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TMEM212-IT1 Gene

Proteins for TMEM212-IT1 Gene

Post-translational modifications for TMEM212-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM212-IT1 Gene

Domains & Families for TMEM212-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM212-IT1 Gene

Function for TMEM212-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM212-IT1 Gene

Localization for TMEM212-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM212-IT1 Gene

Pathways & Interactions for TMEM212-IT1 Gene

SuperPathways for TMEM212-IT1 Gene

No Data Available

Interacting Proteins for TMEM212-IT1 Gene

Gene Ontology (GO) - Biological Process for TMEM212-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM212-IT1 Gene

Transcripts for TMEM212-IT1 Gene

mRNA/cDNA for TMEM212-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM212-IT1 Gene

No ASD Table

Relevant External Links for TMEM212-IT1 Gene

GeneLoc Exon Structure for
TMEM212-IT1
ECgene alternative splicing isoforms for
TMEM212-IT1

Expression for TMEM212-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMEM212-IT1 Gene

genes like me logo Genes that share expression patterns with TMEM212-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMEM212-IT1 Gene

Orthologs for TMEM212-IT1 Gene

Evolution for TMEM212-IT1 Gene

ENSEMBL:
Gene Tree for TMEM212-IT1 (if available)
TreeFam:
Gene Tree for TMEM212-IT1 (if available)

No data available for Orthologs for TMEM212-IT1 Gene

Paralogs for TMEM212-IT1 Gene

No data available for Paralogs for TMEM212-IT1 Gene

Variants for TMEM212-IT1 Gene

Relevant External Links for TMEM212-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM212-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM212-IT1 Gene

Disorders for TMEM212-IT1 Gene

No disorders were found for TMEM212-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMEM212-IT1 Gene

Publications for TMEM212-IT1 Gene

No publications were found for TMEM212-IT1 Gene.

Products for TMEM212-IT1 Gene

Sources for TMEM212-IT1 Gene

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