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Aliases for TMEM212-AS1 Gene

Subcategory (RNA class) for TMEM212-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMEM212-AS1 Gene

  • TMEM212 Antisense RNA 1 2 3 5
  • TMEM212 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TMEM212-AS1 Gene

Previous GeneCards Identifiers for TMEM212-AS1 Gene

  • GC00U933450
  • GC03M171595

Summaries for TMEM212-AS1 Gene

GeneCards Summary for TMEM212-AS1 Gene

TMEM212-AS1 (TMEM212 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM212-AS1 Gene

Genomics for TMEM212-AS1 Gene

Regulatory Elements for TMEM212-AS1 Gene

Enhancers for TMEM212-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F171797 0.8 Ensembl ENCODE 16.3 +103.0 102993 1.5 HDGF TBP CBX3 WRNIP1 KLF17 YBX1 ZNF2 CHAMP1 FOS SMARCA5 TMEM212-IT1 TMEM212-AS1 BZW1P1 TMEM212 PLD1 ENSG00000234594
GH03F172078 1.2 Ensembl ENCODE 16.2 -178.4 -178364 2.0 HDAC1 HDGF KLF17 YBX1 ZNF2 ZBTB40 CHAMP1 FOS PAF1 JUNB TMEM212-AS1 TMEM212-IT1 BZW1P1 FNDC3B RPS27AP8
GH03F172038 0.2 ENCODE 16.2 -140.4 -140366 5.4 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 TMEM212-AS1 TMEM212-IT1 BZW1P1 FNDC3B RPS27AP8
GH03F171904 0.2 ENCODE 0.8 -4.3 -4329 0.9 SOX13 ELF3 SAP130 RARA GATAD1 NR2F6 ZNF652 HOMEZ MIXL1 SOX5 PLD1 TMEM212-AS1 LOC105374217
GH03F171901 0.6 ENCODE 0.8 -1.4 -1357 0.6 SOX13 HDAC1 SAP130 CEBPG ZNF644 GATA3 HOMEZ SOX5 GATAD2A TEAD1 FNDC3B TMEM212-AS1 LOC105374217
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TMEM212-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM212-AS1 Gene

Chromosome:
3
Start:
171,876,352 bp from pter
End:
171,900,740 bp from pter
Size:
24,389 bases
Orientation:
Minus strand

Genomic View for TMEM212-AS1 Gene

Genes around TMEM212-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM212-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM212-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM212-AS1 Gene

Proteins for TMEM212-AS1 Gene

Post-translational modifications for TMEM212-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM212-AS1 Gene

Domains & Families for TMEM212-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM212-AS1 Gene

Function for TMEM212-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM212-AS1 Gene

Localization for TMEM212-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM212-AS1 Gene

Pathways & Interactions for TMEM212-AS1 Gene

SuperPathways for TMEM212-AS1 Gene

No Data Available

Interacting Proteins for TMEM212-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM212-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM212-AS1 Gene

Transcripts for TMEM212-AS1 Gene

mRNA/cDNA for TMEM212-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM212-AS1 Gene

No ASD Table

Relevant External Links for TMEM212-AS1 Gene

GeneLoc Exon Structure for
TMEM212-AS1
ECgene alternative splicing isoforms for
TMEM212-AS1

Expression for TMEM212-AS1 Gene

mRNA expression in normal human tissues for TMEM212-AS1 Gene

genes like me logo Genes that share expression patterns with TMEM212-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMEM212-AS1 Gene

Orthologs for TMEM212-AS1 Gene

Evolution for TMEM212-AS1 Gene

ENSEMBL:
Gene Tree for TMEM212-AS1 (if available)
TreeFam:
Gene Tree for TMEM212-AS1 (if available)

No data available for Orthologs for TMEM212-AS1 Gene

Paralogs for TMEM212-AS1 Gene

No data available for Paralogs for TMEM212-AS1 Gene

Variants for TMEM212-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM212-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10755129 -- 171,877,361(+) AGACT(C/G)CATTG intron-variant
rs10936704 -- 171,882,357(+) gacca(C/T)gatgc intron-variant
rs111376494 -- 171,883,942(+) AATTG(C/T)ACACT intron-variant
rs111669953 -- 171,889,911(+) CTTTA(C/G)TTATA intron-variant
rs111676553 -- 171,880,084(+) CAGAG(A/G)GTTGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM212-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv518951 CNV loss 19592680
nsv7356 OTHER inversion 18451855

Relevant External Links for TMEM212-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM212-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMEM212-AS1 Gene

Disorders for TMEM212-AS1 Gene

Relevant External Links for TMEM212-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM212-AS1

No disorders were found for TMEM212-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM212-AS1 Gene

Publications for TMEM212-AS1 Gene

No publications were found for TMEM212-AS1 Gene.

Products for TMEM212-AS1 Gene

Sources for TMEM212-AS1 Gene

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