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Aliases for TMEM203 Gene

Aliases for TMEM203 Gene

  • Transmembrane Protein 203 2 3 5
  • HBeAg-Binding Protein 1 2 3
  • HBEBP1 3

External Ids for TMEM203 Gene

Previous GeneCards Identifiers for TMEM203 Gene

  • GC09M139224
  • GC09M140098
  • GC09M109558

Summaries for TMEM203 Gene

GeneCards Summary for TMEM203 Gene

TMEM203 (Transmembrane Protein 203) is a Protein Coding gene.

UniProtKB/Swiss-Prot for TMEM203 Gene

  • Involved in the regulation of cellular calcium homeotasis (PubMed:25996873). Required for spermatogenesis (PubMed:25996873).

Additional gene information for TMEM203 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM203 Gene

Genomics for TMEM203 Gene

GeneHancer (GH) Regulatory Elements for TMEM203 Gene

Promoters and enhancers for TMEM203 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I137204 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.1 -74 3.3 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 ZNF207 ZNF143 SP3 NDOR1 TMEM203 TPRN PIR53478 EHMT1 SDCCAG3 CYSRT1 SLC34A3 RNF208
GH09I137207 Enhancer 0.4 FANTOM5 550.8 -1.9 -1918 0.2 POLR2A TMEM203 NDOR1 SLC34A3 FUT7 AJM1 RNF208
GH09I137233 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 -32.7 -32668 9.9 CLOCK MLX FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF416 ZNF143 SP3 TUBB4B EHMT1 SDCCAG3 ANAPC2 NDOR1 DPH7 INPP5E LOC651337 MAN1B1 SNHG7
GH09I137292 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.4 -94.8 -94763 15.3 PKNOX1 FOXA2 ARNT ZFP64 SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 NRARP GC09M137300 EHMT1 DPH7 SDCCAG3 EXD3 NDOR1 INPP5E ANAPC2 MAN1B1
GH09I137166 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.4 +34.5 34493 10.1 HDGF SIN3A ZNF2 ZBTB7B GLIS2 ZNF143 KLF7 SP3 REST GMEB1 MIR3621 TMEM210 LRRC26 ENSG00000261793 MAN1B1 TPRN DPH7 INPP5E ARRDC1-AS1 EXD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMEM203 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the TMEM203 gene promoter:

Genomic Locations for TMEM203 Gene

Genomic Locations for TMEM203 Gene
chr9:137,204,082-137,205,638
(GRCh38/hg38)
Size:
1,557 bases
Orientation:
Minus strand
chr9:140,098,534-140,100,090
(GRCh37/hg19)

Genomic View for TMEM203 Gene

Genes around TMEM203 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM203 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM203 Gene

Proteins for TMEM203 Gene

  • Protein details for TMEM203 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q969S6-TM203_HUMAN
    Recommended name:
    Transmembrane protein 203
    Protein Accession:
    Q969S6
    Secondary Accessions:
    • Q6NW08

    Protein attributes for TMEM203 Gene

    Size:
    136 amino acids
    Molecular mass:
    15760 Da
    Quaternary structure:
    • Interacts with ATP2A2, ITPR3 and STIM1.

neXtProt entry for TMEM203 Gene

Post-translational modifications for TMEM203 Gene

No Post-translational modifications

Other Protein References for TMEM203 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM203 Gene

Domains & Families for TMEM203 Gene

Gene Families for TMEM203 Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins
  • Transporters

Protein Domains for TMEM203 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM203 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM203: view

No data available for UniProtKB/Swiss-Prot for TMEM203 Gene

Function for TMEM203 Gene

Molecular function for TMEM203 Gene

UniProtKB/Swiss-Prot Function:
Involved in the regulation of cellular calcium homeotasis (PubMed:25996873). Required for spermatogenesis (PubMed:25996873).

Phenotypes From GWAS Catalog for TMEM203 Gene

Gene Ontology (GO) - Molecular Function for TMEM203 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25996873
genes like me logo Genes that share ontologies with TMEM203: view
genes like me logo Genes that share phenotypes with TMEM203: view

Animal Models for TMEM203 Gene

MGI Knock Outs for TMEM203:

Animal Model Products

CRISPR Products

miRNA for TMEM203 Gene

miRTarBase miRNAs that target TMEM203

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for TMEM203 Gene

Localization for TMEM203 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM203 Gene

Endoplasmic reticulum membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TMEM203 gene
Compartment Confidence
endoplasmic reticulum 5
plasma membrane 3
extracellular 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for TMEM203 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005783 endoplasmic reticulum IEA,IDA 25996873
GO:0005789 endoplasmic reticulum membrane IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM203: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for TMEM203 Gene

Pathways & Interactions for TMEM203 Gene

SuperPathways for TMEM203 Gene

No Data Available

Interacting Proteins for TMEM203 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000375053%0d%0a9606.ENSP00000429931%0d%0a
Selected Interacting proteins: Q969S6-TM203_HUMAN ENSP00000375053 for TMEM203 Gene via IID STRING

Gene Ontology (GO) - Biological Process for TMEM203 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006874 cellular calcium ion homeostasis IEA,IDA 25996873
GO:0007283 spermatogenesis IEA,ISS --
genes like me logo Genes that share ontologies with TMEM203: view

No data available for Pathways by source and SIGNOR curated interactions for TMEM203 Gene

Drugs & Compounds for TMEM203 Gene

No Compound Related Data Available

Transcripts for TMEM203 Gene

mRNA/cDNA for TMEM203 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(387) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM203 Gene

Transmembrane protein 203:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM203 Gene

No ASD Table

Relevant External Links for TMEM203 Gene

GeneLoc Exon Structure for
TMEM203
ECgene alternative splicing isoforms for
TMEM203

Expression for TMEM203 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMEM203 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for TMEM203 Gene

This gene is overexpressed in Liver (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for TMEM203 Gene



Protein tissue co-expression partners for TMEM203 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMEM203 Gene:

TMEM203

SOURCE GeneReport for Unigene cluster for TMEM203 Gene:

Hs.231029

Evidence on tissue expression from TISSUES for TMEM203 Gene

  • Nervous system(4.7)
  • Lung(4.2)
genes like me logo Genes that share expression patterns with TMEM203: view

Primer Products

No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM203 Gene

Orthologs for TMEM203 Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM203 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM203 33
  • 97.3 (n)
cow
(Bos Taurus)
Mammalia TMEM203 33 34
  • 91.67 (n)
dog
(Canis familiaris)
Mammalia TMEM203 33 34
  • 91.18 (n)
mouse
(Mus musculus)
Mammalia Tmem203 33 16 34
  • 88.24 (n)
rat
(Rattus norvegicus)
Mammalia Tmem203 33
  • 88.24 (n)
oppossum
(Monodelphis domestica)
Mammalia TMEM203 34
  • 69 (a)
OneToOne
chicken
(Gallus gallus)
Aves TMEM203 34
  • 86 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem203 33
  • 78.43 (n)
Str.14635 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.10105 33
zebrafish
(Danio rerio)
Actinopterygii tmem203 33 34
  • 72.79 (n)
wufb52h09 33
fruit fly
(Drosophila melanogaster)
Insecta CG33932 34
  • 39 (a)
OneToOne
Species where no ortholog for TMEM203 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMEM203 Gene

ENSEMBL:
Gene Tree for TMEM203 (if available)
TreeFam:
Gene Tree for TMEM203 (if available)

Paralogs for TMEM203 Gene

No data available for Paralogs for TMEM203 Gene

Variants for TMEM203 Gene

Sequence variations from dbSNP and Humsavar for TMEM203 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000316314 -- 137,205,948(-) G/A upstream_transcript_variant
rs1001913493 -- 137,205,120(-) T/C coding_sequence_variant, missense_variant
rs1001986964 -- 137,204,743(-) T/A 3_prime_UTR_variant
rs1002966087 -- 137,206,627(-) C/A upstream_transcript_variant
rs1003091122 -- 137,206,889(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM203 Gene

Variant ID Type Subtype PubMed ID
dgv13009n54 CNV loss 21841781
dgv13010n54 CNV loss 21841781
esv2422220 CNV deletion 17116639
nsv1161918 CNV duplication 26073780
nsv524322 CNV loss 19592680
nsv616007 CNV loss 21841781
nsv616012 CNV loss 21841781
nsv951207 CNV deletion 24416366

Variation tolerance for TMEM203 Gene

Residual Variation Intolerance Score: 52.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.13; 2.85% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for TMEM203 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM203

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM203 Gene

Disorders for TMEM203 Gene

Additional Disease Information for TMEM203

No disorders were found for TMEM203 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM203 Gene

Publications for TMEM203 Gene

  1. TMEM203 Is a Novel Regulator of Intracellular Calcium Homeostasis and Is Required for Spermatogenesis. (PMID: 25996873) Shambharkar PB … Labow MA (PloS one 2015) 3 4 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  3. Next-generation sequencing to generate interactome datasets. (PMID: 21516116) Yu H … Vidal M (Nature methods 2011) 3 58
  4. Image-based genome-wide siRNA screen identifies selective autophagy factors. (PMID: 22020285) Orvedahl A … Levine B (Nature 2011) 3 58
  5. Defining the human deubiquitinating enzyme interaction landscape. (PMID: 19615732) Sowa ME … Harper JW (Cell 2009) 3 58

Products for TMEM203 Gene

Sources for TMEM203 Gene

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