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Aliases for TMEM202 Gene

Aliases for TMEM202 Gene

  • Transmembrane Protein 202 2 3 5

External Ids for TMEM202 Gene

Previous GeneCards Identifiers for TMEM202 Gene

  • GC15P070479
  • GC15P072690
  • GC15P049521

Summaries for TMEM202 Gene

GeneCards Summary for TMEM202 Gene

TMEM202 (Transmembrane Protein 202) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM202 Gene

Genomics for TMEM202 Gene

Regulatory Elements for TMEM202 Gene

Genomic Location for TMEM202 Gene

Chromosome:
15
Start:
72,398,101 bp from pter
End:
72,408,367 bp from pter
Size:
10,267 bases
Orientation:
Plus strand

Genomic View for TMEM202 Gene

Genes around TMEM202 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM202 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM202 Gene

Proteins for TMEM202 Gene

  • Protein details for TMEM202 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NGA9-TM202_HUMAN
    Recommended name:
    Transmembrane protein 202
    Protein Accession:
    A6NGA9

    Protein attributes for TMEM202 Gene

    Size:
    273 amino acids
    Molecular mass:
    31353 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TMEM202 Gene

Proteomics data for TMEM202 Gene at MOPED

Post-translational modifications for TMEM202 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TMEM202 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM202 Gene

Domains & Families for TMEM202 Gene

Protein Domains for TMEM202 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TMEM202 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM202: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TMEM202 Gene

Function for TMEM202 Gene

Phenotypes for TMEM202 Gene

GenomeRNAi human phenotypes for TMEM202:
genes like me logo Genes that share phenotypes with TMEM202: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM202 Gene

Localization for TMEM202 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM202 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM202 Gene COMPARTMENTS Subcellular localization image for TMEM202 gene
Compartment Confidence
plasma membrane 3
peroxisome 2

No data available for Gene Ontology (GO) - Cellular Components for TMEM202 Gene

Pathways & Interactions for TMEM202 Gene

SuperPathways for TMEM202 Gene

No Data Available

Interacting Proteins for TMEM202 Gene

Gene Ontology (GO) - Biological Process for TMEM202 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM202 Gene

Drugs & Compounds for TMEM202 Gene

No Compound Related Data Available

Transcripts for TMEM202 Gene

mRNA/cDNA for TMEM202 Gene

(5) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(11) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM202 Gene

Transmembrane protein 202:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM202 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4
SP1:
SP2: -

Relevant External Links for TMEM202 Gene

GeneLoc Exon Structure for
TMEM202
ECgene alternative splicing isoforms for
TMEM202

Expression for TMEM202 Gene

mRNA expression in normal human tissues for TMEM202 Gene

mRNA differential expression in normal tissues according to GTEx for TMEM202 Gene

This gene is overexpressed in Testis (x52.8).

Protein differential expression in normal tissues from HIPED for TMEM202 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TMEM202 Gene



SOURCE GeneReport for Unigene cluster for TMEM202 Gene Hs.446069

genes like me logo Genes that share expression patterns with TMEM202: view

Protein tissue co-expression partners for TMEM202 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for TMEM202 Gene

Orthologs for TMEM202 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TMEM202 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM202 35
  • 98.52 (n)
  • 96.68 (a)
TMEM202 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM202 36
  • 65 (a)
OneToOne
TMEM202 35
  • 81.84 (n)
  • 69.51 (a)
dog
(Canis familiaris)
Mammalia TMEM202 35
  • 82.82 (n)
  • 70.16 (a)
TMEM202 36
  • 66 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem202 16
Tmem202 36
  • 56 (a)
OneToOne
Tmem202 35
  • 75.83 (n)
  • 58.78 (a)
oppossum
(Monodelphis domestica)
Mammalia TMEM202 36
  • 39 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem202 35
  • 75.67 (n)
  • 59.32 (a)
Species with no ortholog for TMEM202:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TMEM202 Gene

ENSEMBL:
Gene Tree for TMEM202 (if available)
TreeFam:
Gene Tree for TMEM202 (if available)

Paralogs for TMEM202 Gene

No data available for Paralogs for TMEM202 Gene

Variants for TMEM202 Gene

Sequence variations from dbSNP and Humsavar for TMEM202 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs16956904 - 72,407,208(+) TTTAC(A/T)TGTTT intron-variant, reference, missense
rs7359267 -- 72,396,539(+) cggcc(C/T)ggccg upstream-variant-2KB
rs9806258 -- 72,401,086(+) tgcca(G/T)cttgg intron-variant
rs11490400 -- 72,397,216(+) AGGTG(A/G)GAAAA upstream-variant-2KB
rs11490404 -- 72,397,335(+) GATCT(A/G)TGACC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TMEM202 Gene

Variant ID Type Subtype PubMed ID
nsv469704 CNV Loss 16826518

Variation tolerance for TMEM202 Gene

Residual Variation Intolerance Score: 73.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.92; 48.99% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TMEM202 Gene

HapMap Linkage Disequilibrium report
TMEM202

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM202 Gene

Disorders for TMEM202 Gene

Relevant External Links for TMEM202

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM202

No disorders were found for TMEM202 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM202 Gene

Publications for TMEM202 Gene

  1. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4 67

Products for TMEM202 Gene

Sources for TMEM202 Gene

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