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Aliases for TMEM202 Gene

Aliases for TMEM202 Gene

  • Transmembrane Protein 202 2 3

External Ids for TMEM202 Gene

Summaries for TMEM202 Gene

GeneCards Summary for TMEM202 Gene

TMEM202 (Transmembrane Protein 202) is a Protein Coding gene. GO annotations related to this gene include structural constituent of eye lens.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM202 Gene

Genomics for TMEM202 Gene

Genomic Location for TMEM202 Gene

Start:
72,398,273 bp from pter
End:
72,408,367 bp from pter
Size:
10,095 bases
Orientation:
Plus strand

Genomic View for TMEM202 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM202 Gene

Regulatory Elements for TMEM202 Gene

Proteins for TMEM202 Gene

  • Protein details for TMEM202 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NGA9-TM202_HUMAN
    Recommended name:
    Transmembrane protein 202
    Protein Accession:
    A6NGA9
    Secondary Accessions:

    Protein attributes for TMEM202 Gene

    Size:
    273 amino acids
    Molecular mass:
    31353 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TMEM202 Gene

Proteomics data for TMEM202 Gene at MOPED

Post-translational modifications for TMEM202 Gene

No Post-translational modifications

Other Protein References for TMEM202 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM202 Gene

Domains for TMEM202 Gene

Protein Domains for TMEM202 Gene

ProtoNet:
genes like me logo Genes that share domains with TMEM202: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TMEM202 Gene

Function for TMEM202 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TMEM202 Gene

Localization for TMEM202 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM202 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM202 Gene COMPARTMENTS Subcellular localization image for TMEM202 gene
Compartment Confidence
plasma membrane 3
peroxisome 2

Gene Ontology (GO) - Cellular Components for TMEM202 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM202: view

Pathways for TMEM202 Gene

SuperPathways for TMEM202 Gene

No Data Available

Interacting Proteins for TMEM202 Gene

Gene Ontology (GO) - Biological Process for TMEM202 Gene

None

No data available for Pathways by source for TMEM202 Gene

Transcripts for TMEM202 Gene

mRNA/cDNA for TMEM202 Gene

(5) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(11) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM202 Gene

Transmembrane protein 202:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM202 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4
SP1:
SP2: -

Relevant External Links for TMEM202 Gene

GeneLoc Exon Structure for
TMEM202
ECgene alternative splicing isoforms for
TMEM202

Expression for TMEM202 Gene

mRNA expression in normal human tissues for TMEM202 Gene

mRNA differential expression in normal tissues according to GTEx for TMEM202 Gene

This gene is overexpressed in Testis (52.8).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TMEM202 Gene

SOURCE GeneReport for Unigene cluster for TMEM202 Gene Hs.446069

genes like me logo Genes that share expressions with TMEM202: view

Orthologs for TMEM202 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TMEM202 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM202 36
  • 98.52 (n)
  • 96.68 (a)
TMEM202 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM202 36
  • 81.84 (n)
  • 69.51 (a)
TMEM202 37
  • 65 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM202 36
  • 82.82 (n)
  • 70.16 (a)
TMEM202 37
  • 66 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem202 36
  • 75.83 (n)
  • 58.78 (a)
Tmem202 16
Tmem202 37
  • 56 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM202 37
  • 39 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem202 36
  • 75.67 (n)
  • 59.32 (a)
Species with no ortholog for TMEM202:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TMEM202 Gene

ENSEMBL:
Gene Tree for TMEM202 (if available)
TreeFam:
Gene Tree for TMEM202 (if available)

Paralogs for TMEM202 Gene

No data available for Paralogs for TMEM202 Gene

Variants for TMEM202 Gene

Sequence variations from dbSNP and Humsavar for TMEM202 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1992161 -- 72,408,667(-) CAAAG(C/G)GGTCA downstream-variant-500B
rs4556749 -- 72,399,860(+) AAGAA(A/G)TGGGT intron-variant
rs6495004 -- 72,396,580(+) tgccc(A/G)gctgc upstream-variant-2KB
rs7359267 -- 72,396,539(+) cggcc(C/T)ggccg upstream-variant-2KB
rs7359269 -- 72,396,583(+) ccagc(C/T)gccct upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TMEM202 Gene

Variant ID Type Subtype PubMed ID
nsv469704 CNV Loss 16826518

Relevant External Links for TMEM202 Gene

HapMap Linkage Disequilibrium report
TMEM202

Disorders for TMEM202 Gene

No disorders were found for TMEM202 Gene.

No data available for UniProtKB/Swiss-Prot for TMEM202 Gene

Publications for TMEM202 Gene

  1. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for TMEM202 Gene

Sources for TMEM202 Gene

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