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Aliases for TMEM198B Gene

Aliases for TMEM198B Gene

  • Transmembrane Protein 198B, Pseudogene 2 3
  • Transmembrane Protein 198, Pseudogene 2

External Ids for TMEM198B Gene

Previous GeneCards Identifiers for TMEM198B Gene

  • GC12P056235

Summaries for TMEM198B Gene

GeneCards Summary for TMEM198B Gene

TMEM198B (Transmembrane Protein 198B, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM198B Gene

Genomics for TMEM198B Gene

Genomic Location for TMEM198B Gene

Chromosome:
12
Start:
55,829,608 bp from pter
End:
55,836,246 bp from pter
Size:
6,639 bases
Orientation:
Plus strand

Genomic View for TMEM198B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM198B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM198B Gene

No data available for Regulatory Elements for TMEM198B Gene

Proteins for TMEM198B Gene

Post-translational modifications for TMEM198B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM198B Gene

Domains & Families for TMEM198B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM198B Gene

Function for TMEM198B Gene

Phenotypes for TMEM198B Gene

GenomeRNAi human phenotypes for TMEM198B:
genes like me logo Genes that share phenotypes with TMEM198B: view

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMEM198B

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM198B Gene

Localization for TMEM198B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMEM198B Gene

Pathways & Interactions for TMEM198B Gene

SuperPathways for TMEM198B Gene

No Data Available

Interacting Proteins for TMEM198B Gene

Gene Ontology (GO) - Biological Process for TMEM198B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM198B Gene

Drugs & Compounds for TMEM198B Gene

No Compound Related Data Available

Transcripts for TMEM198B Gene

Unigene Clusters for TMEM198B Gene

Transmembrane protein 198B, pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TMEM198B

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM198B Gene

No ASD Table

Relevant External Links for TMEM198B Gene

GeneLoc Exon Structure for
TMEM198B
ECgene alternative splicing isoforms for
TMEM198B

Expression for TMEM198B Gene

mRNA expression in normal human tissues for TMEM198B Gene

SOURCE GeneReport for Unigene cluster for TMEM198B Gene Hs.731828

genes like me logo Genes that share expression patterns with TMEM198B: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TMEM198B Gene

Orthologs for TMEM198B Gene

Evolution for TMEM198B Gene

ENSEMBL:
Gene Tree for TMEM198B (if available)
TreeFam:
Gene Tree for TMEM198B (if available)

No data available for Orthologs for TMEM198B Gene

Paralogs for TMEM198B Gene

No data available for Paralogs for TMEM198B Gene

Variants for TMEM198B Gene

Sequence variations from dbSNP and Humsavar for TMEM198B Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs750667 -- 55,834,720(+) AGTCT(C/G/T)GCTCC intron-variant
rs4359251 -- 55,832,794(+) CCCCC(A/C/G/T)CCGAC intron-variant
rs5798364 -- 55,832,788(+) CAGTG(-/C)CCCCC intron-variant
rs7955448 -- 55,833,934(+) aaaat(A/C)caaaa intron-variant
rs7956117 -- 55,834,218(+) CTAAA(A/G)AGGCC intron-variant

Relevant External Links for TMEM198B Gene

HapMap Linkage Disequilibrium report
TMEM198B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM198B Gene

Disorders for TMEM198B Gene

Relevant External Links for TMEM198B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM198B
genes like me logo Genes that share disorders with TMEM198B: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM198B Gene

Publications for TMEM198B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 67
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for TMEM198B Gene

Sources for TMEM198B Gene

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