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Aliases for TMEM189 Gene

Aliases for TMEM189 Gene

  • Transmembrane Protein 189 2 3 5
  • KUA 3 4

External Ids for TMEM189 Gene

Previous GeneCards Identifiers for TMEM189 Gene

  • GC20M048134
  • GC20M048740
  • GC20M045488
  • GC20M048699

Summaries for TMEM189 Gene

Entrez Gene Summary for TMEM189 Gene

  • Co-transcription of this gene and the neighboring downstream gene (ubiquitin-conjugating enzyme E2 variant 1) generates a rare read-through transcript, which encodes a fusion protein comprised of sequence sharing identity with each individual gene product. The protein encoded by this individual gene lacks a UEV1 domain but includes three transmembrane regions. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2009]

GeneCards Summary for TMEM189 Gene

TMEM189 (Transmembrane Protein 189) is a Protein Coding gene. Diseases associated with TMEM189 include allergic hypersensitivity disease. GO annotations related to this gene include ubiquitin protein ligase binding and ubiquitin-like protein transferase activity. An important paralog of this gene is TMEM189-UBE2V1.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM189 Gene

Genomics for TMEM189 Gene

Regulatory Elements for TMEM189 Gene

Promoters for TMEM189 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TMEM189 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM189 Gene

Chromosome:
20
Start:
50,118,254 bp from pter
End:
50,153,798 bp from pter
Size:
35,545 bases
Orientation:
Minus strand

Genomic View for TMEM189 Gene

Genes around TMEM189 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM189 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM189 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM189 Gene

Proteins for TMEM189 Gene

  • Protein details for TMEM189 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A5PLL7-TM189_HUMAN
    Recommended name:
    Transmembrane protein 189
    Protein Accession:
    A5PLL7

    Protein attributes for TMEM189 Gene

    Size:
    270 amino acids
    Molecular mass:
    31135 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • TMEM189/KUA and UBE2V1/UEV1 are adjacent genes which can produce independent proteins and can also be fused to form a TMEM189-UBE2V1 hybrid protein.

    Alternative splice isoforms for TMEM189 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TMEM189 Gene

Proteomics data for TMEM189 Gene at MOPED

Post-translational modifications for TMEM189 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TMEM189 Gene

No data available for DME Specific Peptides for TMEM189 Gene

Domains & Families for TMEM189 Gene

Protein Domains for TMEM189 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TMEM189: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TMEM189 Gene

Function for TMEM189 Gene

genes like me logo Genes that share phenotypes with TMEM189: view

Animal Models for TMEM189 Gene

MGI Knock Outs for TMEM189:

Animal Model Products

CRISPR Products

miRNA for TMEM189 Gene

miRTarBase miRNAs that target TMEM189

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for TMEM189 Gene

Localization for TMEM189 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM189 Gene

Endoplasmic reticulum membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM189 Gene COMPARTMENTS Subcellular localization image for TMEM189 gene
Compartment Confidence
endoplasmic reticulum 3
endosome 1
nucleus 1

Gene Ontology (GO) - Cellular Components for TMEM189 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM189: view

Pathways & Interactions for TMEM189 Gene

SuperPathways for TMEM189 Gene

No Data Available

Interacting Proteins for TMEM189 Gene

Selected Interacting proteins: A5PLL7-TM189_HUMAN for TMEM189 Gene via I2D

Symbol External ID(s) Details
TRAF6
UBE2N

Gene Ontology (GO) - Biological Process for TMEM189 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM189 Gene

Drugs & Compounds for TMEM189 Gene

No Compound Related Data Available

Transcripts for TMEM189 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM189 Gene

No ASD Table

Relevant External Links for TMEM189 Gene

GeneLoc Exon Structure for
TMEM189
ECgene alternative splicing isoforms for
TMEM189

Expression for TMEM189 Gene

mRNA expression in normal human tissues for TMEM189 Gene

Protein differential expression in normal tissues from HIPED for TMEM189 Gene

This gene is overexpressed in Bone (44.6) and Placenta (17.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MOPED, and MaxQB for TMEM189 Gene



genes like me logo Genes that share expression patterns with TMEM189: view

Protein tissue co-expression partners for TMEM189 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TMEM189 Gene

Orthologs for TMEM189 Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM189 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM189 35
  • 99.63 (n)
  • 99.63 (a)
TMEM189 36
  • 88 (a)
OneToMany
cow
(Bos Taurus)
Mammalia TMEM189 36
  • 82 (a)
OneToMany
TMEM189 35
  • 90.74 (n)
  • 91.11 (a)
dog
(Canis familiaris)
Mammalia TMEM189 35
  • 92.59 (n)
  • 94.44 (a)
-- 36
  • 83 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Tmem189 16
Tmem189 35
  • 88.52 (n)
  • 93.33 (a)
Gm20431 36
  • 92 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia TMEM189 36
  • 66 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM189 36
  • 63 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Tmem189 35
  • 89.51 (n)
  • 92.96 (a)
chicken
(Gallus gallus)
Aves TMEM189 35
  • 72.4 (n)
  • 81.25 (a)
TMEM189 36
  • 70 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 51 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem189 35
  • 70.16 (n)
  • 73.79 (a)
zebrafish
(Danio rerio)
Actinopterygii tmem189 36
  • 60 (a)
OneToMany
tmem189 35
  • 69.42 (n)
  • 72.83 (a)
fruit fly
(Drosophila melanogaster)
Insecta Kua 36
  • 43 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea Y53C10A.5 36
  • 37 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 47 (a)
OneToMany
Species with no ortholog for TMEM189:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TMEM189 Gene

ENSEMBL:
Gene Tree for TMEM189 (if available)
TreeFam:
Gene Tree for TMEM189 (if available)

Paralogs for TMEM189 Gene

Paralogs for TMEM189 Gene

(2) SIMAP similar genes for TMEM189 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with TMEM189: view

Variants for TMEM189 Gene

Sequence variations from dbSNP and Humsavar for TMEM189 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
VAR_059732 -

Structural Variations from Database of Genomic Variants (DGV) for TMEM189 Gene

Variant ID Type Subtype PubMed ID
nsv834000 CNV Gain+Loss 17160897
esv34129 CNV Loss 18971310

Variation tolerance for TMEM189 Gene

Residual Variation Intolerance Score: 48.4% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TMEM189 Gene

HapMap Linkage Disequilibrium report
TMEM189

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM189 Gene

Disorders for TMEM189 Gene

MalaCards: The human disease database

(1) MalaCards diseases for TMEM189 Gene - From: DISEASES

Disorder Aliases PubMed IDs
allergic hypersensitivity disease
  • allergic disease
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for TMEM189

Human Genome Epidemiology (HuGE) Navigator
TMEM189
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM189
genes like me logo Genes that share disorders with TMEM189: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TMEM189 Gene

Publications for TMEM189 Gene

  1. Fusion of the human gene for the polyubiquitination coeffector UEV1 with Kua, a newly identified gene. (PMID: 11076860) Thomson T.M. … Guigo R. (Genome Res. 2000) 2 3 4 23 67
  2. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 3
  3. Single nucleotide polymorphisms of matrix metalloproteinase 9 (MMP9) and tumor protein 73 (TP73) interact with Epstein-Barr virus in chronic lymphocytic leukemia: results from the European case-control study EpiLymph. (PMID: 21048031) Casabonne D. … de Sanjose S. (Haematologica 2011) 3
  4. The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle. (PMID: 21555518) Warnatz H.J. … Yaspo M.L. (J. Biol. Chem. 2011) 3
  5. Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways. (PMID: 21565611) Sang L. … Jackson P.K. (Cell 2011) 3

Products for TMEM189 Gene

Sources for TMEM189 Gene

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