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Aliases for TMEM185B Gene

Aliases for TMEM185B Gene

  • Transmembrane Protein 185B 2 3 5
  • Family With Sequence Similarity 11, Member B 2 3
  • Transmembrane Protein 185B (Pseudogene) 2 3
  • FAM11B 3 4
  • Putative Transmembrane Protein 185B 3
  • Protein FAM11B 4
  • Ee3_2 3

External Ids for TMEM185B Gene

Previous HGNC Symbols for TMEM185B Gene

  • FAM11B

Previous GeneCards Identifiers for TMEM185B Gene

  • GC02M120696
  • GC02M120978
  • GC02M113302

Summaries for TMEM185B Gene

GeneCards Summary for TMEM185B Gene

TMEM185B (Transmembrane Protein 185B) is a Protein Coding gene. An important paralog of this gene is TMEM185A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM185B Gene

Genomics for TMEM185B Gene

Regulatory Elements for TMEM185B Gene

Enhancers for TMEM185B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F119758 1.2 ENCODE 10.9 +462.5 462454 4.7 HDGF PKNOX1 ARNT CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 TMEM185B EPB41L5 LOC101927764 GC02P119982
GH02F120222 1.1 ENCODE 9.9 +0.1 51 2.2 HDGF ATF1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF48 YY1 GLIS2 TMEM185B RALB PIR50435
GH02F120133 1.2 FANTOM5 Ensembl ENCODE 8.1 +89.2 89231 1.7 SOX5 SOX13 ZNF792 FOXA3 JUN BHLHE40 ZNF644 TEAD3 ZNF24 FOS EPB41L5 TMEM185B LOC105373582
GH02F120107 1.1 Ensembl ENCODE 7.7 +113.8 113807 3.6 CTCF PKNOX1 JUN FEZF1 RAD21 ZBTB40 FOSL1 ZNF664 GATA3 CTBP1 TMEM185B LOC105373582 EPB41L5
GH02F120011 1.1 ENCODE 7.5 +210.2 210164 3.2 PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF143 FOS SP3 EPB41L5 TMEM185B C2orf76 LOC105373582
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMEM185B on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM185B Gene

Chromosome:
2
Start:
120,217,471 bp from pter
End:
120,223,408 bp from pter
Size:
5,938 bases
Orientation:
Minus strand

Genomic View for TMEM185B Gene

Genes around TMEM185B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM185B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM185B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM185B Gene

Proteins for TMEM185B Gene

  • Protein details for TMEM185B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H7F4-T185B_HUMAN
    Recommended name:
    Transmembrane protein 185B
    Protein Accession:
    Q9H7F4
    Secondary Accessions:
    • A8K1G5
    • Q53T33
    • Q66K44
    • Q8IZ77

    Protein attributes for TMEM185B Gene

    Size:
    350 amino acids
    Molecular mass:
    40599 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14938.1; Type=Frameshift; Positions=13; Evidence={ECO:0000305};

neXtProt entry for TMEM185B Gene

Post-translational modifications for TMEM185B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TMEM185B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM185B Gene

Domains & Families for TMEM185B Gene

Protein Domains for TMEM185B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM185B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9H7F4

UniProtKB/Swiss-Prot:

T185B_HUMAN :
  • Belongs to the TMEM185 family.
Family:
  • Belongs to the TMEM185 family.
genes like me logo Genes that share domains with TMEM185B: view

No data available for Gene Families for TMEM185B Gene

Function for TMEM185B Gene

Animal Model Products

  • Taconic Biosciences Mouse Models for TMEM185B

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TMEM185B Gene

Localization for TMEM185B Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM185B Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for TMEM185B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM185B: view

No data available for Subcellular locations from COMPARTMENTS for TMEM185B Gene

Pathways & Interactions for TMEM185B Gene

SuperPathways for TMEM185B Gene

No Data Available

Interacting Proteins for TMEM185B Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000453399%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000453399 Q9H7F4-T185B_HUMAN for TMEM185B Gene via STRING IID

Gene Ontology (GO) - Biological Process for TMEM185B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM185B Gene

Transcripts for TMEM185B Gene

mRNA/cDNA for TMEM185B Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :
(151) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMEM185B Gene

Transmembrane protein 185B:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM185B Gene

No ASD Table

Relevant External Links for TMEM185B Gene

GeneLoc Exon Structure for
TMEM185B
ECgene alternative splicing isoforms for
TMEM185B

Expression for TMEM185B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMEM185B Gene

NURSA nuclear receptor signaling pathways regulating expression of TMEM185B Gene:

TMEM185B

SOURCE GeneReport for Unigene cluster for TMEM185B Gene:

Hs.376722
genes like me logo Genes that share expression patterns with TMEM185B: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMEM185B Gene

Orthologs for TMEM185B Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM185B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM185B 34
  • 99.81 (n)
mouse
(Mus musculus)
Mammalia TMEM185B 35
  • 96 (a)
OneToOne
Tmem185b 34 16
  • 88.76 (n)
dog
(Canis familiaris)
Mammalia TMEM185B 34 35
  • 93.14 (n)
cow
(Bos Taurus)
Mammalia TMEM185B 34 35
  • 90.29 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 89 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Tmem185b 34
  • 88.76 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 88 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 35
  • 88 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 88 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii TMEM185A 35
  • 83 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP001144 34
  • 55.49 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG14194 34 35
  • 54.6 (n)
worm
(Caenorhabditis elegans)
Secernentea CELE_Y116A8C.9 34
  • 49.67 (n)
Y116A8C.9 35
  • 31 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.679 35
  • 52 (a)
OneToMany
Species where no ortholog for TMEM185B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for TMEM185B Gene

ENSEMBL:
Gene Tree for TMEM185B (if available)
TreeFam:
Gene Tree for TMEM185B (if available)

Paralogs for TMEM185B Gene

Paralogs for TMEM185B Gene

(2) SIMAP similar genes for TMEM185B Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for TMEM185B Gene

genes like me logo Genes that share paralogs with TMEM185B: view

Variants for TMEM185B Gene

Sequence variations from dbSNP and Humsavar for TMEM185B Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs111446501 -- 120,219,080(+) GAATA(C/T)GGGAC utr-variant-3-prime
rs111536732 -- 120,223,080(+) CAAGC(C/T)GGCTC utr-variant-5-prime
rs112418043 -- 120,224,491(+) GGAAC(G/T)CATGG upstream-variant-2KB
rs112494419 -- 120,223,865(+) CCAGG(C/T)GGCAG upstream-variant-2KB
rs113116654 -- 120,221,266(+) AGACA(C/T)ATATC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for TMEM185B Gene

Variant ID Type Subtype PubMed ID
nsv1000477 CNV gain 25217958
nsv834346 CNV gain 17160897
nsv508164 CNV deletion 20534489

Variation tolerance for TMEM185B Gene

Gene Damage Index Score: 1.40; 27.63% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TMEM185B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM185B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM185B Gene

Disorders for TMEM185B Gene

Relevant External Links for TMEM185B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM185B

No disorders were found for TMEM185B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM185B Gene

Publications for TMEM185B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. A novel gene, FAM11A, associated with the FRAXF CpG island is transcriptionally silent in FRAXF full mutation. (PMID: 12404111) Shaw M.A. … Gecz J. (Eur. J. Hum. Genet. 2002) 2 3 64
  4. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  5. A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008) 4 64

Products for TMEM185B Gene

Sources for TMEM185B Gene

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