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Aliases for TMEM167B Gene

Aliases for TMEM167B Gene

  • Transmembrane Protein 167B 2 3 4
  • C1orf119 3 4
  • Chromosome 1 Open Reading Frame 119 2
  • Protein Kish-B 3
  • Protein X 013 3
  • AD-020 3

External Ids for TMEM167B Gene

Previous Symbols for TMEM167B Gene

  • C1orf119

Summaries for TMEM167B Gene

GeneCards Summary for TMEM167B Gene

TMEM167B (Transmembrane Protein 167B) is a Protein Coding gene.

UniProtKB/Swiss-Prot for TMEM167B Gene

  • Involved in the early part of the secretory pathway.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM167B Gene

Genomics for TMEM167B Gene

Genomic Location for TMEM167B Gene

Start:
109,089,803 bp from pter
End:
109,096,934 bp from pter
Size:
7,132 bases
Orientation:
Plus strand

Genomic View for TMEM167B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM167B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM167B Gene

Regulatory Elements for TMEM167B Gene

Proteins for TMEM167B Gene

  • Protein details for TMEM167B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NRX6-KISHB_HUMAN
    Recommended name:
    Protein kish-B
    Protein Accession:
    Q9NRX6
    Secondary Accessions:
    • B2RUU9

    Protein attributes for TMEM167B Gene

    Size:
    74 amino acids
    Molecular mass:
    8294 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TMEM167B Gene

Proteomics data for TMEM167B Gene at MOPED

Post-translational modifications for TMEM167B Gene

No Post-translational modifications

Other Protein References for TMEM167B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM167B Gene

Domains for TMEM167B Gene

Protein Domains for TMEM167B Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

KISHB_HUMAN
Family:
  • Belongs to the KISH family.:
    • Q9NRX6
genes like me logo Genes that share domains with TMEM167B: view

No data available for Gene Families for TMEM167B Gene

Function for TMEM167B Gene

Molecular function for TMEM167B Gene

UniProtKB/Swiss-Prot Function: Involved in the early part of the secretory pathway.

Phenotypes for TMEM167B Gene

genes like me logo Genes that share phenotypes with TMEM167B: view

miRNA for TMEM167B Gene

miRTarBase miRNAs that target TMEM167B

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for TMEM167B Gene

Localization for TMEM167B Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM167B Gene

Golgi apparatus membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM167B Gene COMPARTMENTS Subcellular localization image for TMEM167B gene
Compartment Confidence
golgi apparatus 5
extracellular 3

Gene Ontology (GO) - Cellular Components for TMEM167B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000139 Golgi membrane IEA --
GO:0005794 Golgi apparatus --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM167B: view

Pathways for TMEM167B Gene

SuperPathways for TMEM167B Gene

No Data Available

Interacting Proteins for TMEM167B Gene

Gene Ontology (GO) - Biological Process for TMEM167B Gene

None

No data available for Pathways by source for TMEM167B Gene

Transcripts for TMEM167B Gene

mRNA/cDNA for TMEM167B Gene

Unigene Clusters for TMEM167B Gene

Transmembrane protein 167B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM167B Gene

No ASD Table

Relevant External Links for TMEM167B Gene

GeneLoc Exon Structure for
TMEM167B
ECgene alternative splicing isoforms for
TMEM167B

Expression for TMEM167B Gene

mRNA expression in normal human tissues for TMEM167B Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for TMEM167B Gene

SOURCE GeneReport for Unigene cluster for TMEM167B Gene Hs.82933

genes like me logo Genes that share expressions with TMEM167B: view

Orthologs for TMEM167B Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM167B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM167B 36
  • 100 (n)
  • 100 (a)
TMEM167B 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM167B 36
  • 94.59 (n)
  • 98.65 (a)
TMEM167B 37
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM167B 36
  • 96.4 (n)
  • 98.65 (a)
TMEM167B 37
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem167b 36
  • 93.69 (n)
  • 98.65 (a)
Tmem167b 16
Tmem167b 37
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM167B 37
  • 40 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM167B 37
  • 92 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem167b 36
  • 94.59 (n)
  • 98.65 (a)
chicken
(Gallus gallus)
Aves TMEM167B 36
  • 71.62 (n)
  • 79.73 (a)
TMEM167B 37
  • 80 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TMEM167B 37
  • 89 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.19645 36
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem167b 36
  • 72.52 (n)
  • 85.14 (a)
zebrafish
(Danio rerio)
Actinopterygii tmem167b 36
  • 75.23 (n)
  • 81.08 (a)
tmem167b 37
  • 81 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea K07F5.15 36
  • 63.43 (n)
  • 66.67 (a)
Species with no ortholog for TMEM167B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TMEM167B Gene

ENSEMBL:
Gene Tree for TMEM167B (if available)
TreeFam:
Gene Tree for TMEM167B (if available)

Paralogs for TMEM167B Gene

Selected SIMAP similar genes for TMEM167B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TMEM167B: view

No data available for Paralogs for TMEM167B Gene

Variants for TMEM167B Gene

Sequence variations from dbSNP and Humsavar for TMEM167B Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs6765 -- 109,096,568(+) TGAGA(G/T)GTTTT utr-variant-3-prime
rs10292 -- 109,096,488(-) GAACT(A/G)TGGAA utr-variant-3-prime
rs14707 -- 109,096,825(-) ACAGG(A/G)TTTAT utr-variant-3-prime
rs180029 -- 109,091,351(+) TCTTA(C/T)GGAAA intron-variant
rs512671 -- 109,092,776(+) TGTTG(A/G)GGTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM167B Gene

Variant ID Type Subtype PubMed ID
nsv831026 CNV Loss 17160897

Relevant External Links for TMEM167B Gene

HapMap Linkage Disequilibrium report
TMEM167B

Disorders for TMEM167B Gene

No disorders were found for TMEM167B Gene.

No data available for UniProtKB/Swiss-Prot for TMEM167B Gene

Publications for TMEM167B Gene

  1. Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning. (PMID: 10931946) Hu R.-M. … Chen J.-L. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  5. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3

Products for TMEM167B Gene

Sources for TMEM167B Gene

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