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Aliases for TMEM161A Gene

Aliases for TMEM161A Gene

  • Transmembrane Protein 161A 2 3
  • Adaptive Response To Oxidative Stress Protein 29 3 4
  • AROS-29 3 4

External Ids for TMEM161A Gene

Summaries for TMEM161A Gene

GeneCards Summary for TMEM161A Gene

TMEM161A (Transmembrane Protein 161A) is a Protein Coding gene. An important paralog of this gene is TMEM161B.

UniProtKB/Swiss-Prot for TMEM161A Gene

  • May play a role in protection against oxidative stress. Overexpression leads to reduced levels of oxidant-induced DNA damage and apoptosis.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM161A Gene

Genomics for TMEM161A Gene

Genomic Location for TMEM161A Gene

Start:
19,119,169 bp from pter
End:
19,138,513 bp from pter
Size:
19,345 bases
Orientation:
Minus strand

Genomic View for TMEM161A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TMEM161A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM161A Gene

Regulatory Elements for TMEM161A Gene

Proteins for TMEM161A Gene

  • Protein details for TMEM161A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NX61-T161A_HUMAN
    Recommended name:
    Transmembrane protein 161A
    Protein Accession:
    Q9NX61
    Secondary Accessions:
    • B3KUE0
    • G5E9M6
    • Q7L2Y1

    Protein attributes for TMEM161A Gene

    Size:
    479 amino acids
    Molecular mass:
    53602 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TMEM161A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TMEM161A Gene

Proteomics data for TMEM161A Gene at MOPED

Post-translational modifications for TMEM161A Gene

No data available for DME Specific Peptides for TMEM161A Gene

Domains for TMEM161A Gene

Protein Domains for TMEM161A Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM161A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NX61

UniProtKB/Swiss-Prot:

T161A_HUMAN
Family:
  • Belongs to the TMEM161 family.:
    • Q9NX61
genes like me logo Genes that share domains with TMEM161A: view

No data available for Gene Families for TMEM161A Gene

Function for TMEM161A Gene

Molecular function for TMEM161A Gene

UniProtKB/Swiss-Prot Function: May play a role in protection against oxidative stress. Overexpression leads to reduced levels of oxidant-induced DNA damage and apoptosis.
UniProtKB/Swiss-Prot Induction: Up-regulated in cells which display transient adaptation to mild oxidative stress by treatment with diethylmaleate, a glutathione-depleting agent. Also induced by retinoic acid.

miRNA for TMEM161A Gene

miRTarBase miRNAs that target TMEM161A

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for TMEM161A Gene

Localization for TMEM161A Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM161A Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM161A Gene COMPARTMENTS Subcellular localization image for TMEM161A gene
Compartment Confidence
plasma membrane 3
cytosol 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for TMEM161A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TMEM161A: view

Pathways for TMEM161A Gene

SuperPathways for TMEM161A Gene

No Data Available

Interacting Proteins for TMEM161A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000162044%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000162044 Q9NX61-T161A_HUMAN for TMEM161A Gene via STRING I2D

Gene Ontology (GO) - Biological Process for TMEM161A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0032526 response to retinoic acid IDA 16551573
GO:0034599 cellular response to oxidative stress IDA 16551573
GO:0034644 cellular response to UV IDA 16551573
GO:0045739 positive regulation of DNA repair IMP 16551573
GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IMP 16551573
genes like me logo Genes that share ontologies with TMEM161A: view

No data available for Pathways by source for TMEM161A Gene

Transcripts for TMEM161A Gene

Unigene Clusters for TMEM161A Gene

Transmembrane protein 161A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM161A Gene

ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c · 6d ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11a · 11b ^ 12a · 12b · 12c
SP1: - - - - - -
SP2: - - - - - - - - - -
SP3: - -
SP4: - - -
SP5:
SP6: -
SP7: - -
SP8: - -
SP9:

Relevant External Links for TMEM161A Gene

GeneLoc Exon Structure for
TMEM161A
ECgene alternative splicing isoforms for
TMEM161A

Expression for TMEM161A Gene

mRNA expression in normal human tissues for TMEM161A Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for TMEM161A Gene

SOURCE GeneReport for Unigene cluster for TMEM161A Gene Hs.631629

genes like me logo Genes that share expressions with TMEM161A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TMEM161A Gene

Orthologs for TMEM161A Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM161A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM161A 35
  • 99.65 (n)
  • 99.58 (a)
TMEM161A 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TMEM161A 35
  • 86.68 (n)
  • 91 (a)
TMEM161A 36
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TMEM161A 35
  • 85.59 (n)
  • 87.27 (a)
TMEM161A 36
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem161a 35
  • 82.88 (n)
  • 82.88 (a)
Tmem161a 16
Tmem161a 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TMEM161A 36
  • 70 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TMEM161A 36
  • 61 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem161a 35
  • 81.87 (n)
  • 83.05 (a)
chicken
(Gallus gallus)
Aves TMEM161A 35
  • 71 (n)
  • 64.15 (a)
TMEM161A 36
  • 63 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.18468 35
tropical clawed frog
(Silurana tropicalis)
Amphibia tmem161a 35
  • 61.52 (n)
  • 58.46 (a)
zebrafish
(Danio rerio)
Actinopterygii tmem161a 35
  • 61.13 (n)
  • 58.19 (a)
tmem161a 36
  • 53 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG7638 36
  • 33 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea Y87G2A.13 36
  • 24 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 37 (a)
OneToMany
Species with no ortholog for TMEM161A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TMEM161A Gene

ENSEMBL:
Gene Tree for TMEM161A (if available)
TreeFam:
Gene Tree for TMEM161A (if available)

Paralogs for TMEM161A Gene

Paralogs for TMEM161A Gene

Selected SIMAP similar genes for TMEM161A Gene using alignment to 8 proteins:

genes like me logo Genes that share paralogs with TMEM161A: view

Variants for TMEM161A Gene

Sequence variations from dbSNP and Humsavar for TMEM161A Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs11729 -- 19,119,673(+) ACCCT(C/T)GCCAC utr-variant-3-prime
rs756791 -- 19,120,059(+) CCCAG(A/G)GCCCC synonymous-codon, reference
rs756792 -- 19,120,395(+) CCTCA(A/C)TACAT intron-variant
rs964132 -- 19,132,366(+) GTCAC(C/T)GTGAG intron-variant, synonymous-codon, reference
rs2040561 -- 19,137,271(+) TGCAC(C/G)CAACC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM161A Gene

Variant ID Type Subtype PubMed ID
nsv833779 CNV Loss 17160897

Relevant External Links for TMEM161A Gene

HapMap Linkage Disequilibrium report
TMEM161A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM161A Gene

Disorders for TMEM161A Gene

Relevant External Links for TMEM161A

Genetic Association Database (GAD)
TMEM161A
genes like me logo Genes that share disorders with TMEM161A: view

No data available for UniProtKB/Swiss-Prot for TMEM161A Gene

Publications for TMEM161A Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. AROS-29 is involved in adaptive response to oxidative stress. (PMID: 16551573) Montesano Gesualdi N. … Esposito F. (Free Radic. Res. 2006) 3 4
  4. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  5. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3

Products for TMEM161A Gene

  • antibodies-online peptides for TMEM161A
  • antibodies-online antibodies for TMEM161A
  • antibodies-online kits for TMEM161A

Sources for TMEM161A Gene

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