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Aliases for TMEM141 Gene

Aliases for TMEM141 Gene

  • Transmembrane Protein 141 2 3 5

External Ids for TMEM141 Gene

Previous GeneCards Identifiers for TMEM141 Gene

  • GC09P138805
  • GC09P139685
  • GC09P109144

Summaries for TMEM141 Gene

GeneCards Summary for TMEM141 Gene

TMEM141 (Transmembrane Protein 141) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM141 Gene

Genomics for TMEM141 Gene

Regulatory Elements for TMEM141 Gene

Promoters for TMEM141 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TMEM141 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMEM141 Gene

Chromosome:
9
Start:
136,791,325 bp from pter
End:
136,793,317 bp from pter
Size:
1,993 bases
Orientation:
Plus strand

Genomic View for TMEM141 Gene

Genes around TMEM141 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM141 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM141 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM141 Gene

Proteins for TMEM141 Gene

  • Protein details for TMEM141 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96I45-TM141_HUMAN
    Recommended name:
    Transmembrane protein 141
    Protein Accession:
    Q96I45
    Secondary Accessions:
    • A6NIZ7
    • Q5T5R5

    Protein attributes for TMEM141 Gene

    Size:
    108 amino acids
    Molecular mass:
    11875 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI12680.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for TMEM141 Gene

neXtProt entry for TMEM141 Gene

Proteomics data for TMEM141 Gene at MOPED

Post-translational modifications for TMEM141 Gene

No Post-translational modifications

Other Protein References for TMEM141 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TMEM141 Gene

Domains & Families for TMEM141 Gene

Protein Domains for TMEM141 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TMEM141 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96I45

UniProtKB/Swiss-Prot:

TM141_HUMAN :
  • Belongs to the TMEM141 family.
Family:
  • Belongs to the TMEM141 family.
genes like me logo Genes that share domains with TMEM141: view

No data available for Gene Families for TMEM141 Gene

Function for TMEM141 Gene

genes like me logo Genes that share phenotypes with TMEM141: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM141 Gene

Localization for TMEM141 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TMEM141 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TMEM141 Gene COMPARTMENTS Subcellular localization image for TMEM141 gene
Compartment Confidence
mitochondrion 3
extracellular 2
cytosol 1
endoplasmic reticulum 1
nucleus 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for TMEM141 Gene

Pathways & Interactions for TMEM141 Gene

SuperPathways for TMEM141 Gene

No Data Available

Interacting Proteins for TMEM141 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000290079%0d%0a9606.ENSP00000364578%0d%0a
Selected Interacting proteins: Q96I45-TM141_HUMAN ENSP00000290079 for TMEM141 Gene via I2D STRING

Gene Ontology (GO) - Biological Process for TMEM141 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM141 Gene

Drugs & Compounds for TMEM141 Gene

No Compound Related Data Available

Transcripts for TMEM141 Gene

mRNA/cDNA for TMEM141 Gene

Unigene Clusters for TMEM141 Gene

Transmembrane protein 141:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM141 Gene

No ASD Table

Relevant External Links for TMEM141 Gene

GeneLoc Exon Structure for
TMEM141
ECgene alternative splicing isoforms for
TMEM141

Expression for TMEM141 Gene

mRNA expression in normal human tissues for TMEM141 Gene

Protein differential expression in normal tissues from HIPED for TMEM141 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (17.9), Heart (13.1), and Placenta (9.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for TMEM141 Gene



SOURCE GeneReport for Unigene cluster for TMEM141 Gene Hs.356744

genes like me logo Genes that share expression patterns with TMEM141: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TMEM141 Gene

Orthologs for TMEM141 Gene

This gene was present in the common ancestor of animals.

Orthologs for TMEM141 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TMEM141 36
  • 98 (a)
OneToOne
TMEM141 35
  • 98.46 (n)
  • 98.15 (a)
cow
(Bos Taurus)
Mammalia TMEM141 36
  • 81 (a)
OneToOne
TMEM141 35
  • 84.57 (n)
  • 81.48 (a)
dog
(Canis familiaris)
Mammalia TMEM141 35
  • 82.72 (n)
  • 79.63 (a)
TMEM141 36
  • 77 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem141 16
Tmem141 36
  • 79 (a)
OneToOne
Tmem141 35
  • 85.4 (n)
  • 80.95 (a)
oppossum
(Monodelphis domestica)
Mammalia TMEM141 36
  • 35 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tmem141 35
  • 84.26 (n)
  • 79.63 (a)
chicken
(Gallus gallus)
Aves TMEM141 35
  • 68.27 (n)
  • 58.65 (a)
TMEM141 36
  • 45 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.15697 35
tmem141 35
  • 69.02 (n)
  • 63.64 (a)
zebrafish
(Danio rerio)
Actinopterygii tmem141 36
  • 48 (a)
OneToOne
tmem141 35
  • 60 (n)
  • 60 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG42488 36
  • 23 (a)
OneToOne
Species with no ortholog for TMEM141:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TMEM141 Gene

ENSEMBL:
Gene Tree for TMEM141 (if available)
TreeFam:
Gene Tree for TMEM141 (if available)

Paralogs for TMEM141 Gene

Pseudogenes.org Pseudogenes for TMEM141 Gene

genes like me logo Genes that share paralogs with TMEM141: view

No data available for Paralogs for TMEM141 Gene

Variants for TMEM141 Gene

Sequence variations from dbSNP and Humsavar for TMEM141 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10485 -- 136,792,847(-) GTGCC(C/T)CTGCT utr-variant-3-prime
rs2811787 -- 136,790,684(+) ACAGT(A/G)ATTTT upstream-variant-2KB
rs2811788 -- 136,791,837(+) CCCTG(A/G)CTCCC intron-variant
rs2784041 -- 136,792,104(-) AGGGA(C/T)GCAGA intron-variant
rs2784042 -- 136,791,905(-) GGGAT(A/G)GCCAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM141 Gene

Variant ID Type Subtype PubMed ID
dgv2426e1 CNV Complex 17122850
nsv469918 CNV Loss 18288195
nsv894386 CNV Loss 21882294
nsv894387 CNV Gain 21882294
dgv2427e1 CNV Complex 17122850
esv2422220 CNV Deletion 17116639
dgv8408n71 CNV Loss 21882294
dgv8412n71 CNV Loss 21882294
dgv8414n71 CNV Loss 21882294
dgv8415n71 CNV Loss 21882294
dgv8416n71 CNV Loss 21882294
nsv818738 CNV Gain 17921354
nsv466681 CNV Loss 19166990
nsv523639 CNV Loss 19592680
dgv8417n71 CNV Loss 21882294
dgv8418n71 CNV Loss 21882294
dgv8419n71 CNV Loss 21882294
esv2739392 CNV Deletion 23290073

Variation tolerance for TMEM141 Gene

Residual Variation Intolerance Score: 63.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.91; 18.88% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TMEM141 Gene

HapMap Linkage Disequilibrium report
TMEM141

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TMEM141 Gene

Disorders for TMEM141 Gene

Relevant External Links for TMEM141

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMEM141

No disorders were found for TMEM141 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM141 Gene

Publications for TMEM141 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 67
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  3. A lentiviral functional proteomics approach identifies chromatin remodeling complexes important for the induction of pluripotency. (PMID: 20305087) Mak A.B. … Moffat J. (Mol. Cell Proteomics 2010) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3

Products for TMEM141 Gene

Sources for TMEM141 Gene

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