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Aliases for TMED10P1 Gene

Aliases for TMED10P1 Gene

  • Transmembrane P24 Trafficking Protein 10 Pseudogene 1 2 3 5
  • Transmembrane Emp24-Like Trafficking Protein 10 (Yeast) Pseudogene 2 3
  • Transmembrane Emp24-Like Trafficking Protein 10 (Yeast) Pseudogene 1 2
  • Transmembrane Emp24-Like Trafficking Protein 10 Pseudogene 1 3
  • Tmp21-II , Transcribed Pseudogene 3
  • Tmp21-II 3
  • TMED10P 3

External Ids for TMED10P1 Gene

Previous HGNC Symbols for TMED10P1 Gene

  • TMED10P

Previous GeneCards Identifiers for TMED10P1 Gene

  • GC08P146220

Summaries for TMED10P1 Gene

GeneCards Summary for TMED10P1 Gene

TMED10P1 (Transmembrane P24 Trafficking Protein 10 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMED10P1 Gene

Genomics for TMED10P1 Gene

Regulatory Elements for TMED10P1 Gene

Enhancers for TMED10P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F144455 1.4 Ensembl ENCODE 23 -538.4 -538419 1.6 PKNOX1 ARNT CREB3L1 ZFP64 SIN3A ZNF2 ZNF416 ZNF207 ZNF548 FOS ZNF623 ZNF251 ZNF250 VPS28 GPAA1 LRRC14 LOC105375803 ZNF517 ZNF34 PPP1R16A
GH08F144101 1.2 ENCODE 24.7 -891.0 -890954 4.0 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 ZNF623 ZNF250 ZNF251 ZNF517 LRRC14 TMED10P1 ENSG00000255164 WDR97 ZNF696 VPS28
GH08F144425 1.4 FANTOM5 ENCODE 13.9 -565.9 -565927 6.8 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 VPS28 SLC39A4 TONSL C8orf82 TMED10P1 ENSG00000255164 CPSF1 TONSL-AS1
GH08F144899 1.5 FANTOM5 ENCODE 11.2 -93.2 -93246 3.5 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 RPL8 ENSG00000255456 ZNF250 ZNF252P ZNF252P-AS1 ENSG00000255164 TMED10P1 ZNF7 ZNF517 VPS28
GH08F144407 1.1 ENCODE 12.5 -584.7 -584696 4.8 HDGF CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 KLF13 ZNF251 CPSF1 ZNF517 ZNF250 LOC105375803 ENSG00000255456 ENSG00000254574 LRRC14 C8orf82 TMED10P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TMED10P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMED10P1 Gene

Chromosome:
8
Start:
144,994,865 bp from pter
End:
144,998,897 bp from pter
Size:
4,033 bases
Orientation:
Plus strand

Genomic View for TMED10P1 Gene

Genes around TMED10P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMED10P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMED10P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMED10P1 Gene

Proteins for TMED10P1 Gene

Post-translational modifications for TMED10P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMED10P1 Gene

Domains & Families for TMED10P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMED10P1 Gene

Function for TMED10P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMED10P1 Gene

Localization for TMED10P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMED10P1 Gene

Pathways & Interactions for TMED10P1 Gene

SuperPathways for TMED10P1 Gene

No Data Available

Interacting Proteins for TMED10P1 Gene

Gene Ontology (GO) - Biological Process for TMED10P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMED10P1 Gene

Transcripts for TMED10P1 Gene

mRNA/cDNA for TMED10P1 Gene

(3) Additional mRNA sequences :
(100) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMED10P1 Gene

Transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TMED10P1 Gene

No ASD Table

Relevant External Links for TMED10P1 Gene

GeneLoc Exon Structure for
TMED10P1
ECgene alternative splicing isoforms for
TMED10P1

Expression for TMED10P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMED10P1 Gene

mRNA expression in normal human tissues for TMED10P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMED10P1 Gene:

TMED10P1

SOURCE GeneReport for Unigene cluster for TMED10P1 Gene:

Hs.744580
genes like me logo Genes that share expression patterns with TMED10P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMED10P1 Gene

Orthologs for TMED10P1 Gene

Evolution for TMED10P1 Gene

ENSEMBL:
Gene Tree for TMED10P1 (if available)
TreeFam:
Gene Tree for TMED10P1 (if available)

No data available for Orthologs for TMED10P1 Gene

Paralogs for TMED10P1 Gene

No data available for Paralogs for TMED10P1 Gene

Variants for TMED10P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TMED10P1 Gene

Variant ID Type Subtype PubMed ID
nsv818665 CNV loss 17921354
nsv612974 CNV gain 21841781
nsv612971 CNV loss 21841781
nsv612970 CNV gain 21841781
nsv515504 CNV gain+loss 19592680
nsv508533 CNV deletion 20534489
nsv469809 CNV loss 16826518
nsv466024 CNV gain 19166990
nsv1033208 CNV gain+loss 25217958
nsv1032588 CNV loss 25217958
nsv1022340 CNV gain 25217958
nsv1016357 CNV gain 25217958
esv3891498 CNV gain 25118596
esv3619151 CNV gain 21293372
esv3619148 CNV gain 21293372
esv2764084 CNV loss 21179565
esv2761199 CNV gain+loss 21179565
esv2759653 CNV loss 17122850
esv2672137 CNV deletion 23128226
dgv7340n100 CNV loss 25217958
dgv7339n100 CNV gain 25217958
dgv7338n100 CNV gain 25217958
dgv2119e212 CNV loss 25503493
dgv1429e214 CNV loss 21293372
dgv1428e214 CNV loss 21293372
dgv12445n54 CNV loss 21841781

Relevant External Links for TMED10P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMED10P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for TMED10P1 Gene

Disorders for TMED10P1 Gene

Relevant External Links for TMED10P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TMED10P1

No disorders were found for TMED10P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMED10P1 Gene

Publications for TMED10P1 Gene

  1. A comparative study of rat and human Tmp21 (p23) reveals the pseudogene-like features of human Tmp21-II. (PMID: 10376215) Hoerer J. … Schulz I. (DNA Seq. 1999) 2 3 64
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 64
  3. Tmp21 and p24A, two type I proteins enriched in pancreatic microsomal membranes, are members of a protein family involved in vesicular trafficking. (PMID: 8663407) Blum R. … Schulz I. (J. Biol. Chem. 1996) 3 64

Products for TMED10P1 Gene

Sources for TMED10P1 Gene

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