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Aliases for TMA16P2 Gene

Aliases for TMA16P2 Gene

  • Translation Machinery Associated 16 Homolog Pseudogene 2 2 3 5

External Ids for TMA16P2 Gene

Previous GeneCards Identifiers for TMA16P2 Gene

  • GC01M046313

Summaries for TMA16P2 Gene

GeneCards Summary for TMA16P2 Gene

TMA16P2 (Translation Machinery Associated 16 Homolog Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMA16P2 Gene

Genomics for TMA16P2 Gene

Regulatory Elements for TMA16P2 Gene

Enhancers for TMA16P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F045498 0.6 ENCODE 16.2 +347.7 347739 3.3 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CCDC163 PRDX1 TOE1 ZSWIM5 RPS8 TMA16P2 ENSG00000250719 KIF2C GPBP1L1 AKR1A1
GH01F045408 1.3 FANTOM5 Ensembl ENCODE 16.2 +436.7 436719 5.2 FEZF1 ZNF2 ZNF121 GATA2 KLF7 FOS TSHZ1 MEF2D ZSCAN16 SMARCA4 PRDX1 TMA16P2 ENSG00000250719 RPS8 TESK2 RPL7AP16 RPS15AP10 HMGB1P48 MMACHC CCDC163
GH01F044985 0.2 ENCODE 16.2 +861.3 861334 2.0 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 TOE1 GPBP1L1 RPS8 TMA16P2 RPL7AP16 UROD IPP RPS15AP10 TMEM69 BTBD19
GH01F045847 0.6 ENCODE 0.8 -0.4 -431 0.8 ZBTB2 ZBTB33 CCDC163 GPBP1L1 TMEM69 MAST2 ENSG00000250719 PIK3R3 TSPAN1 TMA16P2 GC01M045859
GH01F045843 0.7 Ensembl 0.8 +3.9 3919 0.4 CTCF ZNF654 DPF2 REST RAD21 ARID1B ZNF318 GATA2 SMARCA4 SMC3 MAST2 GPBP1L1 TMEM69 ENSG00000250719 PIK3R3 TSPAN1 TMA16P2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TMA16P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TMA16P2 Gene

Chromosome:
1
Start:
45,845,338 bp from pter
End:
45,847,719 bp from pter
Size:
2,382 bases
Orientation:
Minus strand

Genomic View for TMA16P2 Gene

Genes around TMA16P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMA16P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMA16P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMA16P2 Gene

Proteins for TMA16P2 Gene

Post-translational modifications for TMA16P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMA16P2 Gene

Domains & Families for TMA16P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMA16P2 Gene

Function for TMA16P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMA16P2 Gene

Localization for TMA16P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TMA16P2 Gene

Pathways & Interactions for TMA16P2 Gene

SuperPathways for TMA16P2 Gene

No Data Available

Interacting Proteins for TMA16P2 Gene

Gene Ontology (GO) - Biological Process for TMA16P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMA16P2 Gene

Transcripts for TMA16P2 Gene

mRNA/cDNA for TMA16P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMA16P2 Gene

No ASD Table

Relevant External Links for TMA16P2 Gene

GeneLoc Exon Structure for
TMA16P2
ECgene alternative splicing isoforms for
TMA16P2

Expression for TMA16P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMA16P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMA16P2 Gene:

TMA16P2
genes like me logo Genes that share expression patterns with TMA16P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TMA16P2 Gene

Orthologs for TMA16P2 Gene

Evolution for TMA16P2 Gene

ENSEMBL:
Gene Tree for TMA16P2 (if available)
TreeFam:
Gene Tree for TMA16P2 (if available)

No data available for Orthologs for TMA16P2 Gene

Paralogs for TMA16P2 Gene

No data available for Paralogs for TMA16P2 Gene

Variants for TMA16P2 Gene

Relevant External Links for TMA16P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMA16P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMA16P2 Gene

Disorders for TMA16P2 Gene

No disorders were found for TMA16P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMA16P2 Gene

Publications for TMA16P2 Gene

No publications were found for TMA16P2 Gene.

Products for TMA16P2 Gene

Sources for TMA16P2 Gene

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