Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TLR6 Gene

protein-coding   GIFtS: 64
GCID: GC04M038828

toll-like receptor 6

 Explore 55 diseases affiliated with
TLR6 via our new
 Human Malady Compendium 
Biological research products
for TLR6
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Toll-Like Receptor 61 2
CD2861 2
CD286 Antigen3

External Ids:    HGNC: 167111   Entrez Gene: 103332   Ensembl: ENSG000001741307   OMIM: 6054035   UniProtKB: Q9Y2C93   

Export aliases for TLR6 gene to outside databases

Previous GC identifers: GC04P039066 GC04M038992 GC04M038663 GC04M038725 GC04M038650 GC04M038504 GC04M038149


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TLR6:
The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in
pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share
structural and functional similarities. They recognize pathogen-associated molecular patterns (PAMPs) that are
expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective
immunity. The various TLRs exhibit different patterns of expression. This receptor functionally interacts with
toll-like receptor 2 to mediate cellular response to bacterial lipoproteins. A Ser249Pro polymorphism in the
extracellular domain of the encoded protein may be associated with an increased of asthma is some
populations.(provided by RefSeq, Jan 2011)

UniProtKB/Swiss-Prot: TLR6_HUMAN, Q9Y2C9
Function: Participates in the innate immune response to Gram-positive bacteria and fungi. Specifically recognizes
diacylated and, to a lesser extent, triacylated lipopeptides. Acts via MYD88 and TRAF6, leading to NF-kappa-B
activation, cytokine secretion and the inflammatory response. Recognizes mycoplasmal macrophage-activating
lipopeptide-2kD (MALP-2), soluble tuberculosis factor (STF), phenol-soluble modulin (PSM) and B.burgdorferi outer
surface protein A lipoprotein (OspA-L) cooperatively with TLR2

summary for TLR6:
Toll-like receptors (TLRs) are single transmembrane cell-surface receptors, which have a key role in the
innate immune system. TLRs generally exist as homodimers (although TLR2-TLR6 heterodimers have been
reported) and are found on immune cells such as macrophages, B lymphocytes and mast cells. Toll-like
receptors are activated by molecules associated with biological threat and are highly specific towards
evolutionary conserved entities on microbes, such as bacterial cell-surface lipopolysaccharides, flagella
and unmethylated CpG islands. It has been suggested that some toll-like receptors may have endogenous
ligands, such as Hsp60 and fibrinogen, and this has promoted speculation that endogenous toll-like receptor
activators may have a pathological role in autoimmune disease. Activation of toll-like receptors initiates
downstream signaling cascades, initially via the adapter molecules MyD88, Trap, Trif and Tram, which
converge on the PI 3-K and NF-kappaB pathways and regulate intracellular kinases and gene expression. This
can stimulate an inflammatory and/or antigen-specific immune response. The signaling cascade coupled to
toll-like receptor activation is very similar to that of interleukin-1 receptor (IL-1R) activation.

Gene Wiki entry for TLR6


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016297.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TLR6 gene promoter:
         E2F-4   E2F-3a   ATF-2   E2F-2   CREB   E2F   E2F-1   deltaCREB   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTLR6 promoter sequence
   Search SABiosciences Chromatin IP Primers for TLR6

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TLR6


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4p14   Ensembl cytogenetic band:  4p14   HGNC cytogenetic band: 4p16.1

TLR6 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TLR6 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M038828:  view genomic region     (about GC identifiers)

Start:
38,825,325 bp from pter      End:
38,858,438 bp from pter
Size:
33,114 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TLR6_HUMAN, Q9Y2C9 (See protein sequence)
Recommended Name: Toll-like receptor 6 precursor  
Size: 796 amino acids; 91880 Da
Subunit: Binds MYD88 via their respective TIR domains. Heterodimer with TLR2 via their respective extracellular domains
(By similarity)
Subcellular location: Cell membrane; Single-pass type I membrane protein (By similarity). Cytoplasmic vesicle,
phagosome membrane; Single-pass type I membrane protein (By similarity)
Secondary accessions: B3Y640 B6CH35 B6RFS4 B6RFS5

Explore the universe of human proteins at neXtProt for TLR6: NX_Q9Y2C9

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y2C9

  • TLR6 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006059.2  
    ENSEMBL proteins: 
     ENSP00000371376   ENSP00000424718   ENSP00000423326   ENSP00000389600  
    Reactome Protein details: Q9Y2C9
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    R&D Systems Recombinant & Natural Proteins for TLR6
    Enzo Life Sciences proteins for TLR6
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: TLR6
    OriGene Custom Protein Services for TLR6 
    GenScript Custom Purified and Recombinant Proteins Services for TLR6
    Novus Biologicals TLR6 Proteins
    Novus Biologicals TLR6 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TLR6

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS10231569
    GO:0030670phagocytic vesicle membrane IEA--
    GO:0035355Toll-like receptor 2-Toll-like receptor 6 protein complex IEA--


    TLR6 for ontologies           About GeneDecksing



    TLR6 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of TLR6
    R&D Systems Antibodies for TLR6
    OriGene Antibodies (see all 2): TLR6
    OriGene Custom Antibody Services for TLR6 
    GenScript Custom Superior Antibodies Services for TLR6
    Novus Biologicals TLR6 Antibodies
    Search for Antibodies for TLR6 at Abcam  
    Uscn Antibodies for TLR6
    ThermoFisher Antibody for TLR6

    Assay Products for TLR6: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for TLR6
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TLR6


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TLR6 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR000483 Cys-rich_flank_reg_C
     IPR001611 Leu-rich_rpt
     IPR000157 TIR_dom
     IPR027187 TLR6
     IPR017241 Toll-like_receptor

    Graphical View of Domain Structure for InterPro Entry Q9Y2C9

    ProtoNet protein and cluster: Q9Y2C9

    3 Blocks protein families:
    IPB000157 TIR domain
    IPB000483 Cysteine-rich flanking region
    IPB001611 Leucine-rich repeat signature


    UniProtKB/Swiss-Prot: TLR6_HUMAN, Q9Y2C9
    Similarity: Belongs to the Toll-like receptor family
    Similarity: Contains 19 LRR (leucine-rich) repeats
    Similarity: Contains 1 LRRCT domain
    Similarity: Contains 1 TIR domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TLR6_HUMAN, Q9Y2C9
    Function: Participates in the innate immune response to Gram-positive bacteria and fungi. Specifically recognizes
    diacylated and, to a lesser extent, triacylated lipopeptides. Acts via MYD88 and TRAF6, leading to NF-kappa-B
    activation, cytokine secretion and the inflammatory response. Recognizes mycoplasmal macrophage-activating
    lipopeptide-2kD (MALP-2), soluble tuberculosis factor (STF), phenol-soluble modulin (PSM) and B.burgdorferi outer
    surface protein A lipoprotein (OspA-L) cooperatively with TLR2

         Genatlas biochemistry entry for TLR6:
    Drosophila transmembrane receptor Toll homolog 6,predominantly expressed in spleen,thymus,ovary and lung

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: TLR6
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TLR6
    4 QIAGEN miScript miRNA Assays for microRNAs that regulate TLR6:
    hsa-miR-382 hsa-miR-130b* hsa-miR-4263 hsa-miR-3153
    SwitchGear 3'UTR luciferase reporter plasmidTLR6 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TLR6 (see all 7)
    OriGene shRNA RFP: TLR6
    OriGene siRNA: TLR6
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TLR6

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for TLR6

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: TLR6 (NM_006068)
    Sino Biological Human cDNA Clone for TLR6
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TLR6
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TLR6 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for TLR6
    Search LifeMap BioReagents cell lines for TLR6

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TLR6

    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872receptor activity TAS10426995
    GO:0004888transmembrane signaling receptor activity IEA--
    GO:0042498diacyl lipopeptide binding IEA--
    GO:0046982protein heterodimerization activity IEA--
    GO:0071723lipopeptide binding ISS11431423


    TLR6 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for TLR6:
     Synthetic lethal with c-Myc af 

    Animal Models:
         Mouse knock-out Tlr6tm1Aki for TLR6
         2 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Tlr6):
     immune system  reproductive system 

    TLR6 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1TRAF6 Mediated Induction of proinflammatory cytokines
    Toll Like Receptor TLR1:TLR2 Cascade0.78
    Activated TLR4 signalling0.63
    Toll Like Receptor TLR6:TLR2 Cascade0.78
    Toll Like Receptor 4 (TLR4) Cascade0.61
    Toll Like Receptor 2 (TLR2) Cascade0.78
    Toll-Like Receptors Cascades0.53
    MyD88:Mal cascade initiated on plasma membrane0.78
    2Toll-like receptor signaling pathway
    Toll-like receptor signaling pathway1.00
    Chagas disease (American trypanosomiasis)0.31
    Toll-like receptor signaling pathway0.97
    Inflammasome Activation Pathways0.29
    Toll-Like receptor Signaling Pathways0.51
    3Immune System
    Immune System1.00
    Innate Immune System0.46
    4Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response
    Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response1.00
    Immune response_TLR signaling pathways0.94
    5TRAF Pathway
    TRAF Pathway1.00
    Toll-Like Receptors Pathway0.41

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for TLR6
        Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response

    5 R&D Systems Pathways for TLR6
        Inflammasome Activation Pathways
    IL-21 Signaling and its Primary Biological Effects in Different Immune Cell Types
    Th1 Differentiation
    Toll-Like receptor Signaling Pathways
    Th17 Differentiation

    5/8 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for TLR6 (see all 8)
        NF-KappaB (p50-p65) Pathway
    Toll-Like Receptors Pathway
    TRAF Pathway
    TREM1 Pathway
    Colorectal Cancer Metastasis

    1 Tocris Bioscience Pathway for TLR6
        Toll-like Receptor Pathway

    1 GeneGo (Thomson Reuters) Pathway for TLR6
        Immune response TLR signaling pathways

    1 BioSystems Pathway for TLR6 
        Toll-like receptor signaling pathway

    5/9        Reactome Pathways for TLR6 (see all 9)
        Toll Like Receptor 2 (TLR2) Cascade
    Toll Like Receptor 4 (TLR4) Cascade
    Toll Like Receptor TLR6:TLR2 Cascade
    Toll-Like Receptors Cascades
    MyD88:Mal cascade initiated on plasma membrane


    4         Kegg Pathways  (Kegg details for TLR6):
        Phagosome
    Toll-like receptor signaling pathway
    Chagas disease (American trypanosomiasis)
    Tuberculosis


    TLR6 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TLR6

    STRING Interaction Network Preview (showing 5 interactants - click image to see 11)

    5/12 Interacting proteins for TLR6 (Q9Y2C93 ENSP000003713764) via UniProtKB, MINT, STRING, and/or I2D (see all 12)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    BTKQ061873, ENSP000003081764I2D: score=2 STRING: ENSP00000308176
    TRAP1Q129313, ENSP000002469574I2D: score=2 STRING: ENSP00000246957
    MYD88Q998363, ENSP000003796254I2D: score=1 STRING: ENSP00000379625
    TLR2O606033, ENSP000002600104I2D: score=2 STRING: ENSP00000260010
    CD36P166713I2D: score=1 
    About this table

    Gene Ontology (GO): 5/18 biological process terms (GO ID links to tree view) (see all 18):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002224toll-like receptor signaling pathway TAS--
    GO:0002755MyD88-dependent toll-like receptor signaling pathway TAS--
    GO:0006954inflammatory response IEA--
    GO:0006955immune response TAS10426995
    GO:0007165signal transduction TAS10231569


    TLR6 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TLR6 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for TLR6 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    GIT 27Immunomodulator; reduces production of pro-inflammatory cytokines[6501-72-0]
    4 Novoseek chemical compound relationships for TLR6 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    peptidoglycan 66.9 12 18424724 (4), 15661917 (3), 12538701 (1), 12874299 (1) (see all 5)
    flagellin 55.1 1 19270494 (1)
    rantes 16.4 2 19117515 (1), 19019963 (1)
    lipid 0 1 19931471 (1)

    Search CenterWatch for drugs/clinical trials and news about TLR6 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TLR6 gene: 
    NM_006068.4  

    Unigene Clusters for TLR6:

    Toll-like receptor 6
    Hs.575090  [show with all ESTs], Hs.743572  [show with all ESTs]
    Unigene Representative Sequences: NM_006068, AB445652
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000381950(uc003gtm.3) ENST00000508254 ENST00000514655 ENST00000436693(uc010ifg.2)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: TLR6
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TLR6
    4 QIAGEN miScript miRNA Assays for microRNAs that regulate TLR6:
    hsa-miR-382 hsa-miR-130b* hsa-miR-4263 hsa-miR-3153
    SwitchGear 3'UTR luciferase reporter plasmidTLR6 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TLR6 (see all 7)
    OriGene shRNA RFP: TLR6
    OriGene siRNA: TLR6
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TLR6
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: TLR6 (NM_006068)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TLR6
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TLR6 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TLR6
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TLR6
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TLR6
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TLR6

    Additional cDNA sequence: AB445652.1 

    5 DOTS entries:

    DT.40189829  DT.439547  DT.91841289  DT.101960681  DT.40289093 

    13 AceView cDNA sequences:

    NM_006068 AA810462 AB020807 AA381849 CA310973 CF136926 BI031573 AA831782 
    BQ337481 BF170087 BE814766 AI184710 BI031578 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TLR6 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See TLR6 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TLR6

    SOURCE GeneReport for Unigene clusters: Hs.575090 Hs.743572

    UniProtKB/Swiss-Prot: TLR6_HUMAN, Q9Y2C9
    Tissue specificity: Detected in monocytes, CD11c+ immature dendritic cells, plasmacytoid pre-dendritic cells and dermal
    microvessel endothelial cells

        SABiosciences Expression via Pathway-Focused PCR Arrays including TLR6 (see all 9): 
              Toll-Like Receptor Signaling Pathway in human mouse rat
              Inflammatory Response & Autoimmunity in human mouse rat
              T-cell & B-cell Activation in human mouse rat
              Inflammatory Response & Autoimmunity 384HT in human mouse rat
              Antibacterial Response in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TLR6
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TLR6
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TLR6
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TLR6
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TLR6

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TLR6 gene from 4/14 species (see all 14)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves TLR61 toll-like receptor 6 60.9(n)
    54.2(a)
      771173  NM_001081709.2  NP_001075178.2 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    (see all 3)
    --
    60(a)
    48(a)
    (see all 3)
    many ↔ many
    many ↔ many
    (see all 3)
    GL343361.1(163037-164422)
    GL343361.1(130910-133312)
    zebrafish
    (Danio rerio)
    Actinopterygii tlr11 toll-like receptor 1 47.71(n)
    36.79(a)
      403127  NM_001130593.1  NP_001124065.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Toll-96
    Tehao6
    (see all 5)
    Tehao
    (see all 5)
    14(a)
    13(a)
    (see all 5)
    1 ↔ many
    possible ortholog
    (see all 5)
    3L(20354943-20359824)
    2L(13435622-13439333)


    ENSEMBL Gene Tree for TLR6 (if available)
    TreeFam Gene Tree for TLR6 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TLR6 gene
    CD1802  ENSG000001733662  TLR72  TLR12  TLR92  TLR52  TLR102  LRRC332  
    TLR42  TLR82  LRRC322  TLR32  TLR22  
    3 SIMAP similar genes for TLR6 using alignment to 17 protein entries:     TLR6_HUMAN (see all proteins):
    TLR1    TLR10    TLR2

    TLR6 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for TLR6
         3 CNVs: 9472 80259 92051
         1 Indel: 92052
    Human Gene Mutation Database (HGMD): TLR6
    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TLR6
    DNA2.0 Custom Variant and Variant Library Synthesis for TLR6

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TLR6 for disorders           About GeneDecksing

    OMIM gene information: 605403    OMIM disorders: --

    20/55 diseases for TLR6 (see all 55):    About MalaCards
    asthma    non-hodgkin lymphoma    invasive aspergillosis    oral cavity cancer
    chronic obstructive pulmonary disease    bronchiolitis obliterans    aspergillosis    hodgkin's lymphoma
    inflammatory bowel disease    atopic dermatitis    bronchiolitis    chronic lymphocytic leukemia
    lyme disease    lymphocytic leukemia    filariasis    behcet's disease
    pulmonary disease    urethritis    chagas disease    multiple myeloma

    4 Novoseek disease relationships for TLR6 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    inflammation 40.2 4 19019962 (1), 19117515 (1), 18424724 (1), 18159247 (1)
    necrosis 14.9 5 19621822 (1), 19019963 (1), 16960116 (1), 17714490 (1) (see all 5)
    asthma 12.1 5 15266299 (1), 18547625 (1), 16629799 (1), 16505608 (1)
    tumors 0 4 19621822 (1), 19019963 (1), 16960116 (1), 14585198 (1)

    Genetic Association Database (GAD): TLR6
    Human Genome Epidemiology (HuGE) Navigator: TLR6 (57 documents)

    Export disorders for TLR6 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TLR6 gene, integrated from 9 sources (see all 199):
    (articles sorted by number of sources associating them with TLR6)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. TLR6: a novel member of an expanding Toll-like receptor family. (PubMed id 10231569)1, 2, 3, 9 Takeuchi O.... Akira S. (1999)
    2. Toll-like receptor 6 gene (TLR6): single-nucleotide polymorphism frequencies and preliminary association with the diagnosis of asthma. (PubMed id 15266299)1, 4, 9 Tantisira K....Weiss S.T. (2004)
    3. Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling. (PubMed id 11441107)1, 2, 9 Bulut Y.... Arditi M. (2001)
    4. Evaluation of the toll-like receptor 6 Ser249Pro polymorphism in patients with asthma, atopic dermatitis and chronic obstructive pulmonary disease. (PubMed id 16188043)1, 4, 9 Hoffjan S....Epplen J.T. (2005)
    5. Toll-like receptor-1, -2, and -6 polymorphisms influence disease extension in inflammatory bowel diseases. (PubMed id 16374251)1, 4, 9 Pierik M....Vermeire S. (2006)
    6. Natural selection in the TLR-related genes in the course of primate evolution. (PubMed id 18810425)1, 2 Nakajima T....Kimura A. (2008)
    7. Heterozygous Arg753Gln polymorphism of human TLR-2 impairs immune activation by Borrelia burgdorferi and protects from late stage Lyme disease. (PubMed id 16081826)1, 4 Schroder N.W....Schumann R.R. (2005)
    8. Sequence variants in Toll-like receptor gene cluster (TLR6-TLR1-TLR10) and prostate cancer risk. (PubMed id 15812078)1, 4 Sun J....Gronberg H. (2005)
    9. Surface-expressed TLR6 participates in the recognition of diacylated lipopeptide and peptidoglycan in human cells. (PubMed id 15661917)1, 9 Nakao Y....Matsumoto M. (2005)
    10. Hypoxia inducible factor (HIF)-1 coordinates induction of Toll-like receptors TLR2 and TLR6 during hypoxia. (PubMed id 18159247)1, 9 Kuhlicke J....Eltzschig H.K. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10333 HGNC: 16711 AceView: TLR6 Ensembl:ENSG00000174130 euGenes: HUgn10333
    ECgene: TLR6 Kegg: 10333 H-InvDB: TLR6

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TLR6 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TLR6 gene:
    Search GeneIP for patents involving TLR6

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse Small Molecules at EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of TLR6
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for TLR6 (TLR6)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Recombinant/Natural Proteins for TLR6 (TLR6)  
     OriGene Antibodies for TLR6   OriGene shRNA RFP for TLR6  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TLR6   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TLR6  
     OriGene Protein Over-expression Lysate for TLR6   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for TLR6   OriGene 3'-UTR Clone for TLR6  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TLR6  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for TLR6   OriGene Custom Protein Services for TLR6  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TLR6
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TLR6
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TLR6
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TLR6
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TLR6
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TLR6
     GenScript Custom Purified and Recombinant Proteins Services for TLR6 GenScript cDNA clones with any tag delivered in your preferred vector for TLR6
     GenScript Custom Assay Services for TLR6 GenScript Custom Superior Antibodies Services for TLR6
     GenScript Custom overexpressing Cell Line Services for TLR6 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in TLR6 promoter
     Search Chromatin IP Primers for TLR6
     RT2 qPCR Primer Assay in human, mouse, rat TLR6
     GNC Network for TLR6
     SABiosciences PCR Arrays including human, mouse, rat TLR6
     Tocris compounds for TLR6
     Browse Sino Biological Proteins and Antibodies
     cDNA Clones for TLR6
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Proteins for TLR6
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     TLR6 antibodies
     TLR6 proteins
     TLR6 lysates
     Search for Antibodies for TLR6 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for TLR6
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     TLR6 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for TLR6
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TLR6
     SwitchGear 3'UTR luciferase reporter plasmids for TLR6
     SwitchGear Promoter luciferase reporter plasmids for TLR6
     ThermoFisher Antibody for TLR6
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TLR6
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      TLR6 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4