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Aliases for TISP43 Gene

Aliases for TISP43 Gene

  • Uncharacterized LOC150527 3 5

External Ids for TISP43 Gene

Previous GeneCards Identifiers for TISP43 Gene

  • GC02U901489
  • GC02P131044
  • GC02P131330

Summaries for TISP43 Gene

GeneCards Summary for TISP43 Gene

TISP43 (Uncharacterized LOC150527) is a Pseudogene. GO annotations related to this gene include serine-type endopeptidase activity. An important paralog of this gene is ENSG00000184761.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TISP43 Gene

Genomics for TISP43 Gene

Genomic Location for TISP43 Gene

Chromosome:
2
Start:
130,570,829 bp from pter
End:
130,584,161 bp from pter
Size:
13,333 bases
Orientation:
Plus strand

Genomic View for TISP43 Gene

Genes around TISP43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TISP43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TISP43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TISP43 Gene

No data available for Regulatory Elements for TISP43 Gene

Proteins for TISP43 Gene

  • Protein details for TISP43 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A096LNJ3
    Recommended name:
    Protein LOC646743
    Protein Accession:
    A0A096LNJ3

    Protein attributes for TISP43 Gene

    Size:
    149 amino acids
    Molecular mass:
    16601 Da
    Quaternary structure:
    No Data Available
  • Protein details for TISP43 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B9A019
    Recommended name:
    Protein LOC646743
    Protein Accession:
    B9A019

    Protein attributes for TISP43 Gene

    Size:
    99 amino acids
    Molecular mass:
    11411 Da
    Quaternary structure:
    No Data Available
  • Protein details for TISP43 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B9A030
    Recommended name:
    Protein LOC646743
    Protein Accession:
    B9A030

    Protein attributes for TISP43 Gene

    Size:
    160 amino acids
    Molecular mass:
    17646 Da
    Quaternary structure:
    No Data Available
  • Protein details for TISP43 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H7C364
    Recommended name:
    Protein LOC646743
    Protein Accession:
    H7C364

    Protein attributes for TISP43 Gene

    Size:
    141 amino acids
    Molecular mass:
    15713 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TISP43 Gene

Post-translational modifications for TISP43 Gene

No Post-translational modifications

Other Protein References for TISP43 Gene

No data available for DME Specific Peptides for TISP43 Gene

Domains & Families for TISP43 Gene

Protein Domains for TISP43 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TISP43: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TISP43 Gene

Function for TISP43 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TISP43 Gene

Localization for TISP43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TISP43 Gene

Pathways & Interactions for TISP43 Gene

SuperPathways for TISP43 Gene

No Data Available

Interacting Proteins for TISP43 Gene

Gene Ontology (GO) - Biological Process for TISP43 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
genes like me logo Genes that share ontologies with TISP43: view

No data available for Pathways by source and SIGNOR curated interactions for TISP43 Gene

Transcripts for TISP43 Gene

mRNA/cDNA for TISP43 Gene

(5) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TISP43 Gene

Uncharacterized LOC150527:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TISP43 Gene

No ASD Table

Relevant External Links for TISP43 Gene

GeneLoc Exon Structure for
TISP43

Expression for TISP43 Gene

mRNA expression in normal human tissues for TISP43 Gene

mRNA expression in normal human tissues for TISP43 Gene

mRNA differential expression in normal tissues according to GTEx for TISP43 Gene

This gene is overexpressed in Testis (x50.6).

SOURCE GeneReport for Unigene cluster for TISP43 Gene:

Hs.125706
genes like me logo Genes that share expression patterns with TISP43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TISP43 Gene

Orthologs for TISP43 Gene

Evolution for TISP43 Gene

ENSEMBL:
Gene Tree for TISP43 (if available)
TreeFam:
Gene Tree for TISP43 (if available)

No data available for Orthologs for TISP43 Gene

Paralogs for TISP43 Gene

Paralogs for TISP43 Gene

Pseudogenes.org Pseudogenes for TISP43 Gene

genes like me logo Genes that share paralogs with TISP43: view

Variants for TISP43 Gene

Sequence variations from dbSNP and Humsavar for TISP43 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs112022274 -- 130,570,948(+) GCCGC(C/T)GCGCG intron-variant, nc-transcript-variant
rs112701499 -- 130,572,913(+) CTGCT(A/G)TAAAC intron-variant
rs116778881 -- 130,575,000(+) TATAT(A/G)TATAT intron-variant
rs182308196 -- 130,575,078(+) GGCAC(G/T)TGCCT intron-variant
rs191263585 -- 130,574,981(+) ACTAA(A/T)AAAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TISP43 Gene

Variant ID Type Subtype PubMed ID
dgv2032n106 OTHER inversion 24896259
dgv2035n106 CNV duplication 24896259
dgv4074n100 CNV gain 25217958
esv2759092 CNV gain+loss 17122850
esv3584076 CNV loss 25503493
esv3592455 CNV loss 21293372
nsv1005664 CNV loss 25217958
nsv1072452 CNV deletion 25765185
nsv1072453 CNV deletion 25765185
nsv1118879 CNV deletion 24896259
nsv1147463 OTHER inversion 26484159
nsv1148026 CNV duplication 26484159
nsv428403 CNV loss 18775914
nsv583134 CNV loss 21841781
nsv7327 OTHER inversion 18451855
nsv953164 CNV deletion 24416366
nsv961509 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TISP43 Gene

Disorders for TISP43 Gene

Relevant External Links for TISP43

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TISP43

No disorders were found for TISP43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TISP43 Gene

Publications for TISP43 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for TISP43 Gene

Sources for TISP43 Gene

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