Free for academic non-profit institutions. Other users need a Commercial license

Aliases for THRB-IT1 Gene

Subcategory (RNA class) for THRB-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THRB-IT1 Gene

  • THRB Intronic Transcript 1 2 3 5
  • THRB Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for THRB-IT1 Gene

Previous GeneCards Identifiers for THRB-IT1 Gene

  • GC00U933471

Summaries for THRB-IT1 Gene

GeneCards Summary for THRB-IT1 Gene

THRB-IT1 (THRB Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THRB-IT1 Gene

Genomics for THRB-IT1 Gene

Regulatory Elements for THRB-IT1 Gene

Enhancers for THRB-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G024448 1.2 ENCODE 0.4 +7.2 7166 7.9 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 ZNF416 ZNF263 SP3 NFYC THRB GC03M024442 THRB-IT1
GH03G024489 1.6 Ensembl ENCODE dbSUPER 0.3 -34.2 -34162 7.7 FOXA2 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 THRB-AS1 THRB-IT1
GH03G024472 0.8 ENCODE 0.4 -13.1 -13121 0.4 PKNOX1 ZSCAN4 INSM2 FEZF1 ZEB1 ZNF335 GLI2 FOS ZNF391 KLF8 THRB-IT1 THRB-AS1
GH03G024481 0.8 dbSUPER 0.3 -22.8 -22771 1.5 FOXA2 RAD21 YY1 GATA2 ZNF366 FOS MIXL1 ZNF362 CEBPB ELF1 THRB-AS1 THRB-IT1
GH03G024482 0.8 dbSUPER 0.3 -22.8 -22788 1.9 FOXA2 RAD21 YY1 GATA2 ZNF366 FOS MIXL1 ZNF362 CEBPB ELF1 THRB-AS1 THRB-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around THRB-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for THRB-IT1 Gene

Chromosome:
3
Start:
24,455,136 bp from pter
End:
24,459,434 bp from pter
Size:
4,299 bases
Orientation:
Minus strand

Genomic View for THRB-IT1 Gene

Genes around THRB-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THRB-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THRB-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for THRB-IT1 Gene

Proteins for THRB-IT1 Gene

Post-translational modifications for THRB-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THRB-IT1 Gene

Domains & Families for THRB-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THRB-IT1 Gene

Function for THRB-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THRB-IT1 Gene

Localization for THRB-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for THRB-IT1 Gene

Pathways & Interactions for THRB-IT1 Gene

SuperPathways for THRB-IT1 Gene

No Data Available

Interacting Proteins for THRB-IT1 Gene

Gene Ontology (GO) - Biological Process for THRB-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THRB-IT1 Gene

Transcripts for THRB-IT1 Gene

mRNA/cDNA for THRB-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for THRB-IT1 Gene

No ASD Table

Relevant External Links for THRB-IT1 Gene

GeneLoc Exon Structure for
THRB-IT1
ECgene alternative splicing isoforms for
THRB-IT1

Expression for THRB-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THRB-IT1 Gene

genes like me logo Genes that share expression patterns with THRB-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THRB-IT1 Gene

Orthologs for THRB-IT1 Gene

Evolution for THRB-IT1 Gene

ENSEMBL:
Gene Tree for THRB-IT1 (if available)
TreeFam:
Gene Tree for THRB-IT1 (if available)

No data available for Orthologs for THRB-IT1 Gene

Paralogs for THRB-IT1 Gene

No data available for Paralogs for THRB-IT1 Gene

Variants for THRB-IT1 Gene

Relevant External Links for THRB-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THRB-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THRB-IT1 Gene

Disorders for THRB-IT1 Gene

No disorders were found for THRB-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for THRB-IT1 Gene

Publications for THRB-IT1 Gene

No publications were found for THRB-IT1 Gene.

Products for THRB-IT1 Gene

Sources for THRB-IT1 Gene

Content
Loading form....