Free for academic non-profit institutions. Other users need a Commercial license

Aliases for THRB-IT1 Gene

Subcategory (RNA class) for THRB-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THRB-IT1 Gene

  • THRB Intronic Transcript 1 2 3 5
  • THRB Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for THRB-IT1 Gene

Previous GeneCards Identifiers for THRB-IT1 Gene

  • GC00U933471

Summaries for THRB-IT1 Gene

GeneCards Summary for THRB-IT1 Gene

THRB-IT1 (THRB Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for THRB-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THRB-IT1 Gene

Genomics for THRB-IT1 Gene

GeneHancer (GH) Regulatory Elements for THRB-IT1 Gene

Promoters and enhancers for THRB-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I024489 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.3 -34.2 -34161 7.7 SMAD1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B THRB-AS1 THRB RPL15 ENSG00000272554 THRB-IT1
GH03I024448 Enhancer 0.9 ENCODE 0.4 +7.2 7165 7.9 FOXA2 MLX ARID4B DMAP1 ETS1 YY1 ATF7 RXRA SP5 NFYC THRB THRB-IT1 GC03M024442
GH03I024472 Enhancer 0.4 ENCODE 0.4 -13.1 -13121 0.4 PKNOX1 FOS THRB-IT1 THRB THRB-AS1
GH03I024481 Enhancer 0.5 dbSUPER 0.3 -22.8 -22788 1.9 ARHGAP35 ZNF362 ZNF366 ELF1 ZNF24 THRB THRB-AS1 THRB-IT1
GH03I024471 Enhancer 0.2 FANTOM5 0.4 -12.4 -12377 0.2 THRB-IT1 THRB THRB-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around THRB-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THRB-IT1 Gene

Genomic Locations for THRB-IT1 Gene
chr3:24,455,136-24,459,434
(GRCh38/hg38)
Size:
4,299 bases
Orientation:
Minus strand
chr3:24,496,627-24,500,925
(GRCh37/hg19)

Genomic View for THRB-IT1 Gene

Genes around THRB-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THRB-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THRB-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for THRB-IT1 Gene

Proteins for THRB-IT1 Gene

Post-translational modifications for THRB-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THRB-IT1 Gene

Domains & Families for THRB-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THRB-IT1 Gene

Function for THRB-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THRB-IT1 Gene

Localization for THRB-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THRB-IT1 Gene

Pathways & Interactions for THRB-IT1 Gene

SuperPathways for THRB-IT1 Gene

No Data Available

Interacting Proteins for THRB-IT1 Gene

Gene Ontology (GO) - Biological Process for THRB-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THRB-IT1 Gene

Drugs & Compounds for THRB-IT1 Gene

No Compound Related Data Available

Transcripts for THRB-IT1 Gene

mRNA/cDNA for THRB-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for THRB-IT1 Gene

No ASD Table

Relevant External Links for THRB-IT1 Gene

GeneLoc Exon Structure for
THRB-IT1
ECgene alternative splicing isoforms for
THRB-IT1

Expression for THRB-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THRB-IT1 Gene

genes like me logo Genes that share expression patterns with THRB-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THRB-IT1 Gene

Orthologs for THRB-IT1 Gene

Evolution for THRB-IT1 Gene

ENSEMBL:
Gene Tree for THRB-IT1 (if available)
TreeFam:
Gene Tree for THRB-IT1 (if available)

No data available for Orthologs for THRB-IT1 Gene

Paralogs for THRB-IT1 Gene

No data available for Paralogs for THRB-IT1 Gene

Variants for THRB-IT1 Gene

Additional Variant Information for THRB-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THRB-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THRB-IT1 Gene

Disorders for THRB-IT1 Gene

No disorders were found for THRB-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for THRB-IT1 Gene

Publications for THRB-IT1 Gene

No publications were found for THRB-IT1 Gene.

Products for THRB-IT1 Gene

Sources for THRB-IT1 Gene

Content
Loading form....