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Aliases for THRB-AS1 Gene

Subcategory (RNA class) for THRB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THRB-AS1 Gene

  • THRB Antisense RNA 1 2 3 5

External Ids for THRB-AS1 Gene

Summaries for THRB-AS1 Gene

GeneCards Summary for THRB-AS1 Gene

THRB-AS1 (THRB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for THRB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THRB-AS1 Gene

Genomics for THRB-AS1 Gene

Regulatory Elements for THRB-AS1 Gene

Enhancers for THRB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H024489 1.6 Ensembl ENCODE dbSUPER 5 -0.5 -492 7 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 ZNF416 RPL15 THRB-AS1 THRB-IT1
GH03H024519 1.4 Ensembl ENCODE dbSUPER 5.1 +25.9 25918 1 TBP HDGF TBL1XR1 ARNT TCF12 GATA2 ZSCAN5C ATF7 IKZF2 SMAD5 THRB-AS1 MIR4792 GC03M024503
GH03H024520 1.3 ENCODE dbSUPER 4.8 +27.8 27779 2 HDGF FOXA2 ZFP64 ZNF133 ARID4B SIN3A YBX1 DMAP1 GLI4 ZNF2 THRB-AS1 MIR4792 EIF3KP2
GH03H024481 0.5 dbSUPER 0.4 -11.9 -11866 1 ZNF362 ZNF366 ELF1 ZNF24 THRB-AS1 THRB-IT1
GH03H024472 0.4 ENCODE 0.3 -21.5 -21533 0 PKNOX1 FOS THRB-IT1 THRB-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for THRB-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000149844 713 2401 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 SP3

Genomic Location for THRB-AS1 Gene

Chromosome:
3
Start:
24,494,087 bp from pter
End:
24,681,711 bp from pter
Size:
187,625 bases
Orientation:
Plus strand

Genomic View for THRB-AS1 Gene

Genes around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THRB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THRB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THRB-AS1 Gene

Proteins for THRB-AS1 Gene

Post-translational modifications for THRB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THRB-AS1 Gene

Domains & Families for THRB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THRB-AS1 Gene

Function for THRB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THRB-AS1 Gene

Localization for THRB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THRB-AS1 Gene

Pathways & Interactions for THRB-AS1 Gene

SuperPathways for THRB-AS1 Gene

No Data Available

Interacting Proteins for THRB-AS1 Gene

Gene Ontology (GO) - Biological Process for THRB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THRB-AS1 Gene

Drugs & Compounds for THRB-AS1 Gene

No Compound Related Data Available

Transcripts for THRB-AS1 Gene

mRNA/cDNA for THRB-AS1 Gene

(2) Additional mRNA sequences :
(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for THRB-AS1 Gene

THRB antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for THRB-AS1 Gene

No ASD Table

Relevant External Links for THRB-AS1 Gene

GeneLoc Exon Structure for
THRB-AS1
ECgene alternative splicing isoforms for
THRB-AS1

Expression for THRB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THRB-AS1 Gene

SOURCE GeneReport for Unigene cluster for THRB-AS1 Gene:

Hs.631912
genes like me logo Genes that share expression patterns with THRB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THRB-AS1 Gene

Orthologs for THRB-AS1 Gene

Evolution for THRB-AS1 Gene

ENSEMBL:
Gene Tree for THRB-AS1 (if available)
TreeFam:
Gene Tree for THRB-AS1 (if available)

No data available for Orthologs for THRB-AS1 Gene

Paralogs for THRB-AS1 Gene

No data available for Paralogs for THRB-AS1 Gene

Variants for THRB-AS1 Gene

Sequence variations from dbSNP and Humsavar for THRB-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs770619537 Uncertain significance 24,494,647(+) CTCCT(C/G)TCACC intron-variant
rs886058295 Uncertain significance 24,494,773(-) AAAGA(-/GA)CCTCC intron-variant, utr-variant-5-prime
rs886058296 Uncertain significance 24,494,784(-) TGCGC(C/T)TGGAA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000287384 -- 24,495,207(+) CGGCT(A/G)TCCGA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000559990 -- 24,499,504(+) ATCAC(A/G)TTCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for THRB-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv74n68 CNV gain 17160897
nsv1012975 CNV gain 25217958
nsv999384 CNV gain 25217958

Relevant External Links for THRB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THRB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for THRB-AS1 Gene

Disorders for THRB-AS1 Gene

Relevant External Links for THRB-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
THRB-AS1

No disorders were found for THRB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THRB-AS1 Gene

Publications for THRB-AS1 Gene

No publications were found for THRB-AS1 Gene.

Products for THRB-AS1 Gene

Sources for THRB-AS1 Gene

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