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Aliases for THRB-AS1 Gene

Subcategory (RNA class) for THRB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THRB-AS1 Gene

  • THRB Antisense RNA 1 2 3 5

External Ids for THRB-AS1 Gene

Summaries for THRB-AS1 Gene

GeneCards Summary for THRB-AS1 Gene

THRB-AS1 (THRB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THRB-AS1 Gene

Genomics for THRB-AS1 Gene

Regulatory Elements for THRB-AS1 Gene

Enhancers for THRB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F024489 1.4 Ensembl ENCODE 5 -0.5 -492 7.7 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF416 ZNF263 SP3 THRB-AS1 THRB-IT1
GH03F024519 1.2 Ensembl ENCODE 5 +25.9 25913 1.4 TBP TBL1XR1 GATA2 SMAD5 ZBTB11 GTF2B CEBPB MBD2 KLF16 SMARCA4 THRB-AS1 MIR4792 GC03M024503
GH03F024520 1 ENCODE 4.8 +27.8 27779 2.1 ZNF133 ZFP64 ARID4B SIN3A GLI4 DMAP1 ZNF48 ZNF2 YY1 GLIS2 THRB-AS1 MIR4792 EIF3KP2
GH03F024483 0.7 Ensembl 0.4 -10.1 -10087 0.4 BCOR PKNOX1 ZMYM3 CEBPB JUND ATF3 RBAK ADNP PBX2 PRDM10 THRB-AS1 THRB-IT1
GH03F024472 0.7 ENCODE 0.3 -21.5 -21533 0.4 ZNF639 PKNOX1 GFI1B INSM2 FEZF1 ZNF843 ZEB1 ZNF335 ATF3 ZNF610 THRB-IT1 THRB-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for THRB-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001359545 613 3001 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF263 SP3 REST SMARCB1

Genomic Location for THRB-AS1 Gene

Chromosome:
3
Start:
24,494,087 bp from pter
End:
24,681,711 bp from pter
Size:
187,625 bases
Orientation:
Plus strand

Genomic View for THRB-AS1 Gene

Genes around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THRB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THRB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THRB-AS1 Gene

Proteins for THRB-AS1 Gene

Post-translational modifications for THRB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THRB-AS1 Gene

Domains & Families for THRB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THRB-AS1 Gene

Function for THRB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THRB-AS1 Gene

Localization for THRB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for THRB-AS1 Gene

Pathways & Interactions for THRB-AS1 Gene

SuperPathways for THRB-AS1 Gene

No Data Available

Interacting Proteins for THRB-AS1 Gene

Gene Ontology (GO) - Biological Process for THRB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THRB-AS1 Gene

Transcripts for THRB-AS1 Gene

mRNA/cDNA for THRB-AS1 Gene

(2) Additional mRNA sequences :
(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for THRB-AS1 Gene

THRB antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for THRB-AS1 Gene

No ASD Table

Relevant External Links for THRB-AS1 Gene

GeneLoc Exon Structure for
THRB-AS1
ECgene alternative splicing isoforms for
THRB-AS1

Expression for THRB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for THRB-AS1 Gene

SOURCE GeneReport for Unigene cluster for THRB-AS1 Gene:

Hs.631912
genes like me logo Genes that share expression patterns with THRB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for THRB-AS1 Gene

Orthologs for THRB-AS1 Gene

Evolution for THRB-AS1 Gene

ENSEMBL:
Gene Tree for THRB-AS1 (if available)
TreeFam:
Gene Tree for THRB-AS1 (if available)

No data available for Orthologs for THRB-AS1 Gene

Paralogs for THRB-AS1 Gene

No data available for Paralogs for THRB-AS1 Gene

Variants for THRB-AS1 Gene

Sequence variations from dbSNP and Humsavar for THRB-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs111264452 -- 24,492,820(+) ATGTC(A/G)ATAAA intron-variant, upstream-variant-2KB
rs112139462 -- 24,498,364(+) CAGCA(A/C)AAAAC intron-variant
rs112916524 -- 24,497,289(+) AGGAC(C/T)TCTGA intron-variant
rs113184099 -- 24,495,617(+) TTACT(C/G)TAGTT intron-variant, upstream-variant-2KB
rs113220230 -- 24,499,278(+) GGCCT(G/T)GGTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for THRB-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv999384 CNV gain 25217958
nsv1012975 CNV gain 25217958
dgv74n68 CNV gain 17160897

Relevant External Links for THRB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THRB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for THRB-AS1 Gene

Disorders for THRB-AS1 Gene

Relevant External Links for THRB-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
THRB-AS1

No disorders were found for THRB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THRB-AS1 Gene

Publications for THRB-AS1 Gene

No publications were found for THRB-AS1 Gene.

Products for THRB-AS1 Gene

Sources for THRB-AS1 Gene

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