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Aliases for THOC7-AS1 Gene

Subcategory (RNA class) for THOC7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THOC7-AS1 Gene

  • THOC7 Antisense RNA 1 2 3 5
  • THOC7 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for THOC7-AS1 Gene

Previous GeneCards Identifiers for THOC7-AS1 Gene

  • GC00U933019

Summaries for THOC7-AS1 Gene

GeneCards Summary for THOC7-AS1 Gene

THOC7-AS1 (THOC7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for THOC7-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THOC7-AS1 Gene

Genomics for THOC7-AS1 Gene

GeneHancer (GH) Regulatory Elements for THOC7-AS1 Gene

Promoters and enhancers for THOC7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I063859 Enhancer 0.2 ENCODE 550.8 -1.0 -985 0.2 THOC7-AS1 THOC7 LOC100130345
GH03I063966 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.2 +109.3 109251 7.6 PKNOX1 FOXA2 ARID4B DMAP1 ZNF2 ZNF48 YY1 ZNF766 ZNF143 ATF7 ATXN7 PSMD6-AS2 THOC7 THOC7-AS1 SCAANT1
GH03I063910 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 12.4 +52.0 52008 4 ATF1 FOXA2 ARID4B SIN3A ZNF48 ETS1 YY1 GLIS2 ZNF207 ZNF143 SCAANT1 PSMD6-AS2 THOC7 ATXN7 THOC7-AS1 LOC100130345 ADAMTS9-AS2
GH03I063959 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.2 +99.9 99871 1.4 HDAC1 ZNF2 RAD21 ZNF335 ZNF366 FOS USF2 REST ZEB2 ELF1 THOC7 THOC7-AS1 ATXN7 PSMD6-AS2 SCAANT1
GH03I063975 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.2 +118.4 118399 8.3 SOX13 PKNOX1 SAP130 ZSCAN4 MAX FEZF1 CEBPG POLR2A FOS GATAD2A ATXN7 PSMD6-AS2 THOC7 THOC7-AS1 SCAANT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around THOC7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THOC7-AS1 Gene

Genomic Locations for THOC7-AS1 Gene
chr3:63,860,645-63,861,819
(GRCh38/hg38)
Size:
1,175 bases
Orientation:
Plus strand
chr3:63,846,321-63,847,495
(GRCh37/hg19)

Genomic View for THOC7-AS1 Gene

Genes around THOC7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THOC7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THOC7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THOC7-AS1 Gene

Proteins for THOC7-AS1 Gene

Post-translational modifications for THOC7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THOC7-AS1 Gene

Domains & Families for THOC7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THOC7-AS1 Gene

Function for THOC7-AS1 Gene

Phenotypes From GWAS Catalog for THOC7-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THOC7-AS1 Gene

Localization for THOC7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THOC7-AS1 Gene

Pathways & Interactions for THOC7-AS1 Gene

SuperPathways for THOC7-AS1 Gene

No Data Available

Interacting Proteins for THOC7-AS1 Gene

Gene Ontology (GO) - Biological Process for THOC7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THOC7-AS1 Gene

Drugs & Compounds for THOC7-AS1 Gene

No Compound Related Data Available

Transcripts for THOC7-AS1 Gene

mRNA/cDNA for THOC7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for THOC7-AS1 Gene

No ASD Table

Relevant External Links for THOC7-AS1 Gene

GeneLoc Exon Structure for
THOC7-AS1
ECgene alternative splicing isoforms for
THOC7-AS1

Expression for THOC7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THOC7-AS1 Gene

genes like me logo Genes that share expression patterns with THOC7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THOC7-AS1 Gene

Orthologs for THOC7-AS1 Gene

Evolution for THOC7-AS1 Gene

ENSEMBL:
Gene Tree for THOC7-AS1 (if available)
TreeFam:
Gene Tree for THOC7-AS1 (if available)

No data available for Orthologs for THOC7-AS1 Gene

Paralogs for THOC7-AS1 Gene

No data available for Paralogs for THOC7-AS1 Gene

Variants for THOC7-AS1 Gene

Sequence variations from dbSNP and Humsavar for THOC7-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000312104 -- 63,861,860(+) T/C downstream_transcript_variant
rs1000427573 -- 63,860,359(+) T/C upstream_transcript_variant
rs1000483033 -- 63,860,144(+) A/G upstream_transcript_variant
rs1001551142 -- 63,860,691(+) C/T non_coding_transcript_variant
rs1001665456 -- 63,860,992(+) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for THOC7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1008751 CNV gain 25217958

Additional Variant Information for THOC7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THOC7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for THOC7-AS1 Gene

Disorders for THOC7-AS1 Gene

Additional Disease Information for THOC7-AS1

No disorders were found for THOC7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THOC7-AS1 Gene

Publications for THOC7-AS1 Gene

No publications were found for THOC7-AS1 Gene.

Products for THOC7-AS1 Gene

Sources for THOC7-AS1 Gene

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