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Aliases for THOC7-AS1 Gene

Subcategory (RNA class) for THOC7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THOC7-AS1 Gene

  • THOC7 Antisense RNA 1 2 3 5
  • THOC7 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for THOC7-AS1 Gene

Previous GeneCards Identifiers for THOC7-AS1 Gene

  • GC00U933019

Summaries for THOC7-AS1 Gene

GeneCards Summary for THOC7-AS1 Gene

THOC7-AS1 (THOC7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THOC7-AS1 Gene

Genomics for THOC7-AS1 Gene

Regulatory Elements for THOC7-AS1 Gene

Enhancers for THOC7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G063966 1.5 Ensembl ENCODE dbSUPER 11.2 +109.3 109252 7.6 PKNOX1 WRNIP1 ZFP64 SIN3A ARID4B DMAP1 ZNF2 ZNF48 YY1 ZNF766 PSMD6-AS2 THOC7 THOC7-AS1 ATXN7 SCAANT1
GH03G063975 1.5 Ensembl ENCODE dbSUPER 11.1 +118.4 118399 8.3 PKNOX1 ARID4B DMAP1 FEZF1 ZNF48 ZNF2 YY1 ZNF766 ZNF143 FOS ATXN7 PSMD6-AS2 THOC7 THOC7-AS1 SCAANT1
GH03G063910 1.3 ENCODE dbSUPER 12.4 +52.0 52008 4.0 HNRNPUL1 FOXA2 ATF1 CREB3L1 ARID4B SIN3A ZNF2 ZNF48 YY1 GLIS2 PSMD6-AS2 THOC7 ATXN7 THOC7-AS1 LOC100130345 SCAANT1
GH03G063959 1.4 Ensembl ENCODE dbSUPER 11.2 +99.9 99872 1.4 FOXA2 ZNF2 FOS REST ZNF518A ZNF592 SREBF1 SMARCA4 NBN HMBOX1 THOC7 THOC7-AS1 ATXN7 PSMD6-AS2 SCAANT1
GH03G063937 1.3 Ensembl ENCODE dbSUPER 11.4 +77.3 77300 1.5 CTCF PKNOX1 TFAP4 TAL1 NFXL1 CEBPG YY1 ZNF316 ZSCAN5C ZNF143 THOC7 ATXN7 THOC7-AS1 PSMD6-AS2 SCAANT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around THOC7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for THOC7-AS1 Gene

Chromosome:
3
Start:
63,860,645 bp from pter
End:
63,861,819 bp from pter
Size:
1,175 bases
Orientation:
Plus strand

Genomic View for THOC7-AS1 Gene

Genes around THOC7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THOC7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THOC7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THOC7-AS1 Gene

Proteins for THOC7-AS1 Gene

Post-translational modifications for THOC7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THOC7-AS1 Gene

Domains & Families for THOC7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THOC7-AS1 Gene

Function for THOC7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THOC7-AS1 Gene

Localization for THOC7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for THOC7-AS1 Gene

Pathways & Interactions for THOC7-AS1 Gene

SuperPathways for THOC7-AS1 Gene

No Data Available

Interacting Proteins for THOC7-AS1 Gene

Gene Ontology (GO) - Biological Process for THOC7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THOC7-AS1 Gene

Transcripts for THOC7-AS1 Gene

mRNA/cDNA for THOC7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for THOC7-AS1 Gene

No ASD Table

Relevant External Links for THOC7-AS1 Gene

GeneLoc Exon Structure for
THOC7-AS1
ECgene alternative splicing isoforms for
THOC7-AS1

Expression for THOC7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THOC7-AS1 Gene

genes like me logo Genes that share expression patterns with THOC7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THOC7-AS1 Gene

Orthologs for THOC7-AS1 Gene

Evolution for THOC7-AS1 Gene

ENSEMBL:
Gene Tree for THOC7-AS1 (if available)
TreeFam:
Gene Tree for THOC7-AS1 (if available)

No data available for Orthologs for THOC7-AS1 Gene

Paralogs for THOC7-AS1 Gene

No data available for Paralogs for THOC7-AS1 Gene

Variants for THOC7-AS1 Gene

Sequence variations from dbSNP and Humsavar for THOC7-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000312104 -- 63,861,860(+) CGATC(C/T)TGGCT intron-variant, downstream-variant-500B
rs1000427573 -- 63,860,359(+) TGGCT(C/T)TAGAA intron-variant, upstream-variant-2KB
rs1000483033 -- 63,860,144(+) ATTTA(A/G)GAAAA intron-variant, upstream-variant-2KB
rs1001551142 -- 63,860,691(+) TCACC(C/T)CACTT intron-variant, nc-transcript-variant
rs1001665456 -- 63,860,992(+) AAGAG(A/G)GAAGG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for THOC7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1008751 CNV gain 25217958

Relevant External Links for THOC7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THOC7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for THOC7-AS1 Gene

Disorders for THOC7-AS1 Gene

Relevant External Links for THOC7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
THOC7-AS1

No disorders were found for THOC7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THOC7-AS1 Gene

Publications for THOC7-AS1 Gene

No publications were found for THOC7-AS1 Gene.

Products for THOC7-AS1 Gene

Sources for THOC7-AS1 Gene

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