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Aliases for THEM6 Gene

Aliases for THEM6 Gene

  • Thioesterase Superfamily Member 6 2 3 4 5
  • Mesenchymal Stem Cell Protein DSCD75 3 4
  • C8orf55 3 4
  • Chromosome 8 Open Reading Frame 55 2
  • UPF0670 Protein C8orf55 3
  • UPF0670 Protein THEM6 3
  • DSCD75 3

External Ids for THEM6 Gene

Previous HGNC Symbols for THEM6 Gene

  • C8orf55

Previous GeneCards Identifiers for THEM6 Gene

  • GC08P143808

Summaries for THEM6 Gene

GeneCards Summary for THEM6 Gene

THEM6 (Thioesterase Superfamily Member 6) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THEM6 Gene

Genomics for THEM6 Gene

Regulatory Elements for THEM6 Gene

Promoters for THEM6 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around THEM6 on UCSC Golden Path with GeneCards custom track

Genomic Location for THEM6 Gene

Chromosome:
8
Start:
142,727,203 bp from pter
End:
142,736,932 bp from pter
Size:
9,730 bases
Orientation:
Plus strand

Genomic View for THEM6 Gene

Genes around THEM6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THEM6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THEM6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THEM6 Gene

Proteins for THEM6 Gene

  • Protein details for THEM6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WUY1-THEM6_HUMAN
    Recommended name:
    Protein THEM6
    Protein Accession:
    Q8WUY1
    Secondary Accessions:
    • B2RDN6
    • Q8NBN2
    • Q9NYI2

    Protein attributes for THEM6 Gene

    Size:
    208 amino acids
    Molecular mass:
    23865 Da
    Quaternary structure:
    No Data Available

neXtProt entry for THEM6 Gene

Proteomics data for THEM6 Gene at MOPED

Post-translational modifications for THEM6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for THEM6 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for THEM6 Gene

Domains & Families for THEM6 Gene

Protein Domains for THEM6 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for THEM6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8WUY1

UniProtKB/Swiss-Prot:

THEM6_HUMAN :
  • Belongs to the THEM6 family.
Family:
  • Belongs to the THEM6 family.
genes like me logo Genes that share domains with THEM6: view

No data available for Gene Families for THEM6 Gene

Function for THEM6 Gene

genes like me logo Genes that share phenotypes with THEM6: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for THEM6 Gene

Localization for THEM6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for THEM6 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for THEM6 Gene COMPARTMENTS Subcellular localization image for THEM6 gene
Compartment Confidence
extracellular 5
cytosol 2
nucleus 2
endoplasmic reticulum 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for THEM6 Gene

Pathways & Interactions for THEM6 Gene

SuperPathways for THEM6 Gene

No Data Available

Interacting Proteins for THEM6 Gene

STRING Interaction Network Preview (showing 4 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000338607%0d%0a9606.ENSP00000377252%0d%0a9606.ENSP00000221138%0d%0a9606.ENSP00000418447%0d%0a9606.ENSP00000279387%0d%0a
Selected Interacting proteins: ENSP00000338607 Q8WUY1-THEM6_HUMAN for THEM6 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for THEM6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THEM6 Gene

Drugs & Compounds for THEM6 Gene

No Compound Related Data Available

Transcripts for THEM6 Gene

Unigene Clusters for THEM6 Gene

Thioesterase superfamily member 6:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for THEM6 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3
SP1:
SP2: -
SP3: - -

Relevant External Links for THEM6 Gene

GeneLoc Exon Structure for
THEM6
ECgene alternative splicing isoforms for
THEM6

Expression for THEM6 Gene

mRNA expression in normal human tissues for THEM6 Gene

Protein differential expression in normal tissues from HIPED for THEM6 Gene

This gene is overexpressed in Nasal epithelium (53.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for THEM6 Gene



SOURCE GeneReport for Unigene cluster for THEM6 Gene Hs.368402

genes like me logo Genes that share expression patterns with THEM6: view

Protein tissue co-expression partners for THEM6 Gene

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for THEM6 Gene

Orthologs for THEM6 Gene

This gene was present in the common ancestor of animals.

Orthologs for THEM6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia THEM6 35
  • 99.68 (n)
  • 100 (a)
THEM6 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia THEM6 36
  • 87 (a)
OneToOne
THEM6 35
  • 86.24 (n)
  • 86.77 (a)
dog
(Canis familiaris)
Mammalia THEM6 36
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Them6 16
Them6 35
  • 83.87 (n)
  • 89.36 (a)
Them6 36
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia THEM6 36
  • 66 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Them6 35
  • 84.57 (n)
  • 88.83 (a)
lizard
(Anolis carolinensis)
Reptilia THEM6 36
  • 59 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia them6 35
  • 64.72 (n)
  • 60.64 (a)
zebrafish
(Danio rerio)
Actinopterygii THEM6 (1 of 2) 36
  • 50 (a)
OneToMany
THEM6 (2 of 2) 36
  • 47 (a)
OneToMany
si:ch73-52e5.2 35
  • 59.32 (n)
  • 53.23 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP003487 35
  • 51.5 (n)
  • 35.39 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG4660 36
  • 26 (a)
OneToMany
CG4666 36
  • 36 (a)
OneToMany
CG4666 35
  • 52.06 (n)
  • 37.08 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 24 (a)
OneToOne
Species with no ortholog for THEM6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for THEM6 Gene

ENSEMBL:
Gene Tree for THEM6 (if available)
TreeFam:
Gene Tree for THEM6 (if available)

Paralogs for THEM6 Gene

No data available for Paralogs for THEM6 Gene

Variants for THEM6 Gene

Sequence variations from dbSNP and Humsavar for THEM6 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
VAR_032034 -
rs2585134 -- 142,734,117(-) atgat(A/G)gaaga intron-variant
rs3832574 -- 142,736,049(+) GGGCT(-/C)CCCCA utr-variant-3-prime
rs7009266 -- 142,728,979(+) ctgtc(A/G)cccag intron-variant
rs10087426 -- 142,733,136(+) gcaac(A/G)tacaa intron-variant

Variation tolerance for THEM6 Gene

Gene Damage Index Score: 0.90; 18.71% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for THEM6 Gene

HapMap Linkage Disequilibrium report
THEM6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for THEM6 Gene

Disorders for THEM6 Gene

Relevant External Links for THEM6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
THEM6

No disorders were found for THEM6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THEM6 Gene

Publications for THEM6 Gene

  1. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PMID: 16303743) Otsuki T. … Isogai T. (DNA Res. 2005) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  4. The central role of EED in the orchestration of polycomb group complexes. (PMID: 24457600) Cao Q. … Chinnaiyan A.M. (Nat Commun 2014) 3
  5. Characterization of the EGFR interactome reveals associated protein complex networks and intracellular receptor dynamics. (PMID: 23956138) Foerster S. … Ritter C.A. (Proteomics 2013) 3

Products for THEM6 Gene

Sources for THEM6 Gene

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