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Aliases for THEM5 Gene

Aliases for THEM5 Gene

  • Thioesterase Superfamily Member 5 2 3 4
  • ACOT15 3 4 6
  • Acyl-Coenzyme A Thioesterase 15 3 4
  • Acyl-CoA Thioesterase THEM5 3 4
  • Acyl-Coenzyme A Thioesterase THEM5 3
  • EC 3.1.2.2 4

External Ids for THEM5 Gene

Summaries for THEM5 Gene

GeneCards Summary for THEM5 Gene

THEM5 (Thioesterase Superfamily Member 5) is a Protein Coding gene. Diseases associated with THEM5 include median rhomboid glossitis and glossitis. GO annotations related to this gene include palmitoyl-CoA hydrolase activity. An important paralog of this gene is THEM4.

UniProtKB/Swiss-Prot for THEM5 Gene

  • Has acyl-CoA thioesterase activity towards long-chain (C16 and C18) fatty acyl-CoA substrates, with a preference for linoleyl-CoA and other unsaturated long-chain fatty acid-CoA esters. Plays an important role in mitochondrial fatty acid metabolism, and in remodeling of the mitochondrial lipid cardiolipin. Required for normal mitochondrial function.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THEM5 Gene

Genomics for THEM5 Gene

Genomic Location for THEM5 Gene

Start:
151,845,744 bp from pter
End:
151,855,451 bp from pter
Size:
9,708 bases
Orientation:
Minus strand

Genomic View for THEM5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for THEM5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THEM5 Gene

Regulatory Elements for THEM5 Gene

Proteins for THEM5 Gene

  • Protein details for THEM5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N1Q8-ACO15_HUMAN
    Recommended name:
    Acyl-coenzyme A thioesterase THEM5
    Protein Accession:
    Q8N1Q8
    Secondary Accessions:
    • Q5T1C3

    Protein attributes for THEM5 Gene

    Size:
    247 amino acids
    Molecular mass:
    27677 Da
    Quaternary structure:
    • Homodimer.

    Three dimensional structures from OCA and Proteopedia for THEM5 Gene

neXtProt entry for THEM5 Gene

Proteomics data for THEM5 Gene at MOPED

Post-translational modifications for THEM5 Gene

No Post-translational modifications

Other Protein References for THEM5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for THEM5 Gene

Domains for THEM5 Gene

Protein Domains for THEM5 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for THEM5 Gene

Graphical View of Domain Structure for InterPro Entry

Q8N1Q8

UniProtKB/Swiss-Prot:

ACO15_HUMAN
Family:
  • Belongs to the THEM4/THEM5 thioesterase family.:
    • Q8N1Q8
genes like me logo Genes that share domains with THEM5: view

No data available for Gene Families for THEM5 Gene

Function for THEM5 Gene

Molecular function for THEM5 Gene

UniProtKB/Swiss-Prot BiophysicochemicalProperties: Kinetic parameters: KM=2.4 uM for palmitoyl-CoA (C16:0) {ECO:0000269 PubMed:22586271}; KM=4.2 uM for stearoyl-CoA (C18:0) {ECO:0000269 PubMed:22586271}; KM=2.9 uM for oleoyl-CoA (C18:1) {ECO:0000269 PubMed:22586271}; KM=4.2 uM for linoleyl-CoA (C18:2) {ECO:0000269 PubMed:22586271};
UniProtKB/Swiss-Prot CatalyticActivity: Palmitoyl-CoA + H(2)O = CoA + palmitate.
UniProtKB/Swiss-Prot Function: Has acyl-CoA thioesterase activity towards long-chain (C16 and C18) fatty acyl-CoA substrates, with a preference for linoleyl-CoA and other unsaturated long-chain fatty acid-CoA esters. Plays an important role in mitochondrial fatty acid metabolism, and in remodeling of the mitochondrial lipid cardiolipin. Required for normal mitochondrial function.

Enzyme Numbers (IUBMB) for THEM5 Gene

Gene Ontology (GO) - Molecular Function for THEM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0016290 palmitoyl-CoA hydrolase activity IDA 22586271
genes like me logo Genes that share ontologies with THEM5: view
genes like me logo Genes that share phenotypes with THEM5: view

Animal Models for THEM5 Gene

MGI Knock Outs for THEM5:

No data available for miRNA , Transcription Factor Targeting and HOMER Transcription for THEM5 Gene

Localization for THEM5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for THEM5 Gene

Mitochondrion matrix.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for THEM5 Gene COMPARTMENTS Subcellular localization image for THEM5 gene
Compartment Confidence
mitochondrion 5
cytosol 2
extracellular 1
golgi apparatus 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for THEM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion --
GO:0005759 mitochondrial matrix IDA 22586271
genes like me logo Genes that share ontologies with THEM5: view

Pathways for THEM5 Gene

SuperPathways for THEM5 Gene

No Data Available

Interacting Proteins for THEM5 Gene

Gene Ontology (GO) - Biological Process for THEM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006631 fatty acid metabolic process IEA --
GO:0035336 long-chain fatty-acyl-CoA metabolic process IDA 22586271
GO:0035965 cardiolipin acyl-chain remodeling ISS --
genes like me logo Genes that share ontologies with THEM5: view

No data available for Pathways by source for THEM5 Gene

Transcripts for THEM5 Gene

mRNA/cDNA for THEM5 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for THEM5 Gene

Thioesterase superfamily member 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for THEM5 Gene

No ASD Table

Relevant External Links for THEM5 Gene

GeneLoc Exon Structure for
THEM5
ECgene alternative splicing isoforms for
THEM5

Expression for THEM5 Gene

mRNA expression in normal human tissues for THEM5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for THEM5 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (24.7) and Skin - Not Sun Exposed (Suprapubic) (19.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for THEM5 Gene

SOURCE GeneReport for Unigene cluster for THEM5 Gene Hs.132648

genes like me logo Genes that share expressions with THEM5: view

No data available for mRNA Expression by UniProt/SwissProt for THEM5 Gene

Orthologs for THEM5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for THEM5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia THEM5 35
  • 96.21 (n)
  • 94.21 (a)
THEM5 36
  • 91 (a)
OneToOne
cow
(Bos Taurus)
Mammalia THEM5 35
  • 80.14 (n)
  • 68.98 (a)
THEM5 36
  • 68 (a)
OneToOne
dog
(Canis familiaris)
Mammalia THEM5 35
  • 86.5 (n)
  • 83 (a)
THEM5 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Them5 35
  • 83.4 (n)
  • 78.14 (a)
Them5 16
Them5 36
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia THEM5 36
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia THEM5 36
  • 50 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Them5 35
  • 83.47 (n)
  • 78.69 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 32 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 30 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii THEM4 36
  • 29 (a)
OneToMany
Species with no ortholog for THEM5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for THEM5 Gene

ENSEMBL:
Gene Tree for THEM5 (if available)
TreeFam:
Gene Tree for THEM5 (if available)

Paralogs for THEM5 Gene

Paralogs for THEM5 Gene

Selected SIMAP similar genes for THEM5 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with THEM5: view

Variants for THEM5 Gene

Sequence variations from dbSNP and Humsavar for THEM5 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs745055 -- 151,852,673(+) AAGGG(C/T)GGGCA intron-variant
rs923547 -- 151,849,527(+) ACTAC(A/C)TGTTT intron-variant
rs923548 -- 151,849,720(+) CTCGA(A/G)ACCAA intron-variant
rs998454 -- 151,845,522(-) AGAAC(A/G)GGAGT downstream-variant-500B
rs998455 -- 151,845,387(-) gaggc(A/C)gaggt downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for THEM5 Gene

Variant ID Type Subtype PubMed ID
nsv516369 CNV Gain 19592680
esv2717906 CNV Deletion 23290073
esv2717918 CNV Deletion 23290073

Relevant External Links for THEM5 Gene

HapMap Linkage Disequilibrium report
THEM5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for THEM5 Gene

Disorders for THEM5 Gene

(1) University of Copenhagen DISEASES for THEM5 Gene

Relevant External Links for THEM5

Genetic Association Database (GAD)
THEM5
Human Genome Epidemiology (HuGE) Navigator
THEM5
genes like me logo Genes that share disorders with THEM5: view

No data available for UniProtKB/Swiss-Prot for THEM5 Gene

Publications for THEM5 Gene

  1. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 48
  2. Acyl coenzyme A thioesterase Them5/Acot15 is involved in cardiolipin remodeling and fatty liver development. (PMID: 22586271) Zhuravleva E. … Hemmings B.A. (Mol. Cell. Biol. 2012) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S. … Seielstad M. (Genes Immun. 2010) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for THEM5 Gene

Sources for THEM5 Gene

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