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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

THBS2 Gene

protein-coding   GIFtS: 64
GCID: GC06M169615

thrombospondin 2

 Explore 50 diseases affiliated with
THBS2 via our new
 Human Malady Compendium 
Biological research products
for THBS2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Thrombospondin 21 2
TSP21 2 3
Thrombospondin-21

External Ids:    HGNC: 117861   Entrez Gene: 70582   Ensembl: ENSG000001863407   OMIM: 1880615   UniProtKB: P354423   

Export aliases for THBS2 gene to outside databases

Previous GC identifers: GC06U990123 GC06M9S0210 GC06M169433 GC06M167041


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for THBS2:
The protein encoded by this gene belongs to the thrombospondin family. It is a disulfide-linked homotrimeric
glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. This protein has been shown to function as a
potent inhibitor of tumor growth and angiogenesis. Studies of the mouse counterpart suggest that this protein may
modulate the cell surface properties of mesenchymal cells and be involved in cell adhesion and migration. (provided by
RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442
Function: Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. Ligand for CD36 mediating
antiangiogenic properties

Gene Wiki entry for THBS2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_025741.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the THBS2 gene promoter:
         MyoD   Nkx2-5   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTHBS2 promoter sequence
   Search SABiosciences Chromatin IP Primers for THBS2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat THBS2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6q27   Ensembl cytogenetic band:  6q27   HGNC cytogenetic band: 6q27

THBS2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
THBS2 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M169615:  view genomic region     (about GC identifiers)

Start:
169,615,875 bp from pter      End:
169,654,139 bp from pter
Size:
38,265 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442 (See protein sequence)
Recommended Name: Thrombospondin-2 precursor  
Size: 1172 amino acids; 129991 Da
Subunit: Homotrimer; disulfide-linked. Interacts (via the TSP type I repeats) with CD36; the interaction conveys an
antiangiogenic effect. Interacts (via the TSP type I repeats) with HRG; the interaction blocks the antiangiogenic
effect of THBS2 with CD36 (By similarity). Can bind to fibrinogen, fibronectin, laminin and type V collagen
2 PDB 3D structures from and Proteopedia for THBS2:
1YO8 (3D)        2RHP (3D)    
Secondary accessions: A6H8N1 A7E232 Q5RI52

Explore the universe of human proteins at neXtProt for THBS2: NX_P35442

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P35442

  • THBS2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_003238.2  
    ENSEMBL proteins: 
     ENSP00000355751   ENSP00000398928  
    Reactome Protein details: P35442
    Human Recombinant Protein Products: 
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    Uscn Proteins for THBS2

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region TAS--
    GO:0005604basement membrane IEA--
    GO:0031012extracellular matrix ----


    THBS2 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    THBS2 for domains           About GeneDecksing

    5/13 InterPro domains/families (see all 13):
     IPR000884 Thrombospondin_1_rpt
     IPR001881 EGF-like_Ca-bd
     IPR000742 EG-like_dom
     IPR013320 ConA-like_subgrp
     IPR001791 Laminin_G

    Graphical View of Domain Structure for InterPro Entry P35442

    ProtoNet protein and cluster: P35442

    5/6 Blocks protein families (see all 6):
    IPB000884 Thrombospondin
    IPB001007 von Willebrand factor
    IPB001881 EGF-like calcium-binding
    IPB006210 Type I EGF
    IPB008085 Thrombospondin type 1 repeat signature


    UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442
    Similarity: Belongs to the thrombospondin family
    Similarity: Contains 2 EGF-like domains
    Similarity: Contains 1 laminin G-like domain
    Similarity: Contains 1 TSP C-terminal (TSPC) domain
    Similarity: Contains 3 TSP type-1 domains
    Similarity: Contains 8 TSP type-3 repeats
    Similarity: Contains 1 VWFC domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442
    Function: Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. Ligand for CD36 mediating
    antiangiogenic properties

         Genatlas biochemistry entry for THBS2:
    thrombospondin II,extracellular,glycoprotein expressed in smooth muscle,fibroblast in cell adhesion molecule

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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005509calcium ion binding IEA--
    GO:0005515protein binding IPI19818485
    GO:0008201heparin binding IEA--


    THBS2 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for THBS2:
     Decreased number of cells in m 

    Animal Models:
         Mouse knock-out Thbs2tm1Bst for THBS2
         13 MGI mutant phenotypes (inferred from 1 allele(MGI details for Thbs2):
     behavior/neurological  cardiovascular system  cellular  hematopoietic system  homeostasis/metabolism 
     immune system  integument  limbs/digits/tail  mortality/aging  muscle 
     respiratory system  skeleton  tumorigenesis 

    THBS2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Focal Adhesion
    Focal Adhesion1.00
    Focal adhesion0.66
    2Malaria
    Malaria1.00
    3ECM-receptor interaction
    ECM-receptor interaction1.00
    4Phagosome
    Phagosome1.00
    5TGF-beta signaling pathway
    TGF-beta signaling pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for THBS2
        Inhibition of Matrix Metalloproteinases

    1 BioSystems Pathway for THBS2 
        Focal Adhesion

    2        Reactome Pathways for THBS2
        Signal Transduction
    Signaling by PDGF


    5         Kegg Pathways  (Kegg details for THBS2):
        Phagosome
    TGF-beta signaling pathway
    Focal adhesion
    ECM-receptor interaction
    Malaria


    THBS2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for THBS2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/37 Interacting proteins for THBS2 (P354421, 3 ENSP000003557514) via UniProtKB, MINT, STRING, and/or I2D (see all 37)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    MMP2P082533, ENSP000002190704I2D: score=2 STRING: ENSP00000219070
    THBS3P497463, ENSP000003573624I2D: score=2 STRING: ENSP00000357362
    MMP9P147803, ENSP000003614054I2D: score=3 STRING: ENSP00000361405
    ITGA4ENSP000003802274STRING: ENSP00000380227
    ITGA6ENSP000003868964STRING: ENSP00000386896
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007155cell adhesion IEA--
    GO:0016525negative regulation of angiogenesis IDA--
    GO:0051965positive regulation of synapse assembly ----


    THBS2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    THBS2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for THBS2
    10/12 Novoseek chemical compound relationships for THBS2 gene (see all 12)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cerivastatin 45.4 1 12605021 (1)
    tgf beta1 40.9 4 15347840 (3), 9016857 (1)
    procollagen 38 1 1426766 (1)
    vegf 32.5 20 16365183 (6), 10448307 (2), 17107379 (2), 10821491 (1) (see all 5)
    acth 17.6 3 10342868 (2), 12358136 (1)
    oligonucleotide 12.7 1 11563036 (1)
    ganciclovir 10.8 1 10950755 (1)
    heparin 9.04 2 8663244 (1), 1459996 (1)
    thymidine 0 3 9016857 (1), 11723011 (1)
    calcium 0 12 16246837 (5), 17620335 (3), 7798222 (1), 18682400 (1)

    Search CenterWatch for drugs/clinical trials and news about THBS2 / TSP2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for THBS2 gene: 
    NM_003247.2  

    Unigene Cluster for THBS2:

    Thrombospondin 2
    Hs.371147  [show with all ESTs]
    Unigene Representative Sequence: NM_003247
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000366787(uc003qwt.3) ENST00000488355 ENST00000461848 ENST00000472733
    ENST00000435791

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    hsa-miR-582-3p hsa-miR-3938 hsa-miR-30d hsa-miR-9 hsa-miR-124 hsa-miR-30a hsa-miR-506 hsa-miR-181b
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    Additional cDNA sequence: 

    AK292429.1 BC127845.1 BC146676.1 BC150175.1 BX641023.1 L12350.1 M81339.1 

    14 DOTS entries:

    DT.318423  DT.86854901  DT.97858822  DT.95261122  DT.100792529  DT.86837324  DT.97858821  DT.100792527 
    DT.100792528  DT.100792531  DT.121351011  DT.40224336  DT.75150060  DT.95149447 

    24/320 AceView cDNA sequences (see all 320):

    AI750269 BU627598 H88241 CN483550 C00154 AW581293 CA431209 CB267812 
    AA962069 C21348 AI753153 AA953039 CK000113 AA344029 CA414667 NM_003247 
    BU728348 AI130835 BX641023 AI753719 AI580302 AL603377 BU736223 CA446830 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for THBS2 (see all 7)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b · 7c ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18 ^
    SP1:                    -     -     -                                               -                             -                 -                           
    SP2:                    -     -     -                                                                                                                           
    SP3:                          -     -                                                                                                                           
    SP4:                                -                                                                                                                           
    SP5:                                                                                                                                                            

    ExUns: 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26
    SP1:                                                
    SP2:                                                
    SP3:                                                
    SP4:                                                
    SP5:                                                


    ECgene alternative splicing isoforms for THBS2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    THBS2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCAGACTCAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    THBS2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    8 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    BoneStylopod Epiphyseal EndPrechondrocytesBone, Cartilage
    BoneAutopod Epiphyseal EndPrechondrocytesBone, Cartilage
    BoneZeugopod Epiphyseal EndPrechondrocytesBone, Cartilage
    LimbAutopodMesenchymal Condensate CellsBone, Cartilage
    LimbStylopodMesenchymal Condensate CellsBone, Cartilage
    LimbZeugopodMesenchymal Condensate CellsBone, Cartilage
    HeartAtrioventricular NodeAtrioventricular Node CellsMyocardium
    KidneyInterstitial StromaKidney
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 10 LifeMap Cells 
    NameCategory
    Sclerotome cells (Primary Cell)Bone, Cartilage, Somite
    PureStem™ progenitor E68 (Embryonic Progenitor Cell)
    PureStem™ progenitor T42 (Embryonic Progenitor Cell)
    PureStem™ mesenchymal Progenitor SK11 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    PureStem™ mesenchymal progenitor 4D20.8 (Embryonic Progenitor Cell)Lateral Plate Mesoderm, Neural Crest
    PureStem™ mesenchymal progenitor E15 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    PureStem™ progenitor E69 (Embryonic Progenitor Cell)
    PureStem™ progenitor T36 (Embryonic Progenitor Cell)
    ES04(HES-4) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
    Line H9 (WA09) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass

    See THBS2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for THBS2

    SOURCE GeneReport for Unigene cluster: Hs.371147

    UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442
    Tissue specificity: High expression in invertebral disk tissue

        SABiosciences Expression via Pathway-Focused PCR Arrays including THBS2: 
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              Fibrosis in human mouse rat
              Extracellular Matrix & Adhesion Molecules in human mouse rat
              Angiogenesis in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for THBS2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for THBS2 gene from 3/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves THBS21 thrombospondin 2 73.58(n)
    79.59(a)
      414837  NM_001001755.1  NP_001001755.1 
    lizard
    (Anolis carolinensis)
    Reptilia THBS26
    --
    79(a)
    1 ↔ 1
    1(223967288-224015624)
    zebrafish
    (Danio rerio)
    Actinopterygii thbs2a1 thrombospondin 2a 70.07(n)
    72.03(a)
      794881  XM_001919813.3  XP_001919848.3 


    ENSEMBL Gene Tree for THBS2 (if available)
    TreeFam Gene Tree for THBS2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for THBS2 gene
    THBS12  THBS42  COMP2  THBS32  
    5 SIMAP similar genes for THBS2 using alignment to 2 protein entries:     TSP2_HUMAN (see all proteins):
    DKFZp686G02190    THBS3    COMP    THBS4    THBS1

    THBS2 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for THBS2
    PGOHUM00000258302


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1123 NCBI SNPs in THBS2 are shown (see all 1123    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs732382771,2
    C,--169615401(+) GCCCGA/GTCGGC 1 -- ds50012Minor allele frequency- G:0.11WA 120
    rs597281971,2
    C,--169615416(+) TTTTAG/AGCAGT 1 -- ds50014Minor allele frequency- A:0.09WA NA EA 360
    rs1906896351,2
    --169615457(+) GGTCCG/TCTACT 1 -- ds50010--------
    rs1410483621,2
    --169615509(+) CAGCTC/TGTATT 1 -- ds50010--------
    rs1468759531,2
    --169615599(+) CCCTCA/GTTTGA 1 -- ds50010--------
    rs1393976201,2
    --169615612(+) ATGAGC/TAGAGG 1 -- ds50010--------
    rs1426925041,2
    --169615631(+) ATGAAC/TTGCTA 1 -- ds50010--------
    rs725668871,2
    F,--169615655(+) CACACC/TGTGCT 1 -- ds50011Minor allele frequency- T:0.07EA 120
    rs771500071,2
    C,F,--169615656(+) ACACCG/ATGCTG 1 -- ds50011Minor allele frequency- A:0.04NA 120
    rs2004716121,2
    --169615821(+) ACCCC-/TTTCCC 1 -- ds50010--------

    HapMap Linkage Disequilibrium report for THBS2 (169615875 - 169654139 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 10 variations for THBS2
         5 CNVs: 81771 94253 64725 94256 94255
         5 Indels: 62601 81773 94254 47060 81772
    Human Gene Mutation Database (HGMD): THBS2

    SABiosciences Cancer Mutation PCR Assays
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    DNA2.0 Custom Variant and Variant Library Synthesis for THBS2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    THBS2 for disorders           About GeneDecksing

    OMIM gene information: 188061   
    OMIM disorders: 603932  
    UniProtKB/Swiss-Prot: TSP2_HUMAN, P35442
  • Genetic variations in THBS2 may be a cause of susceptibility to intervertebral disk disease (IDD)
  • [MIM:603932]; also known as lumbar disk herniation (LDH). IDD is one of the most common musculo-skeletal disorders and
    the predominant cause of low-back pain and unilateral leg pain

    20/50 diseases for THBS2 (see all 50):    About MalaCards
    lumbar disc herniation    ehlers-danlos syndrome    posterior uveal melanoma    thoracic aortic aneurysm
    pre-eclampsia    back pain    type 2 diabetes mellitus    aortic aneurysm
    uterine fibroid    gingival overgrowth    myocardial infarction    malignant glioma
    cytomegalovirus infection    coronary heart disease    diabetes mellitus    malignant mesothelioma
    herpes simplex    endometrial cancer    eclampsia    cervical cancer

    10/23 Novoseek disease relationships for THBS2 gene (see all 23)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    neovascularization 36.8 1 19578767 (1)
    carcinoma lewis lung 32.3 1 11929817 (1)
    collagen fibril 29.6 1 12781637 (1)
    tumors 29 59 18955754 (6), 10611308 (4), 11929817 (3), 11712798 (3) (see all 20)
    carcinoma squamous cell 21.4 6 11929817 (1), 11147670 (1), 14675207 (1), 10611308 (1)
    melanoma 20.7 9 12353704 (3), 19082472 (3), 11929817 (1), 9032471 (1) (see all 5)
    glioma 18.9 8 10448307 (4), 17919663 (1), 11132930 (1)
    metastasis 18.7 14 9888480 (3), 18720079 (2), 12353704 (2), 19082472 (2) (see all 5)
    cancer 18.6 3 11147670 (1), 18955754 (1)
    breast carcinoma 14.6 4 9012463 (2), 9032471 (1)

    Genetic Association Database (GAD): THBS2
    Human Genome Epidemiology (HuGE) Navigator: THBS2 (17 documents)

    Export disorders for THBS2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for THBS2 gene, integrated from 9 sources (see all 172):
    (articles sorted by number of sources associating them with THBS2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A functional polymorphism in THBS2 that affects alternative splicing and MMP binding is associated with lumbar-disc herniation. (PubMed id 18455130)1, 2, 3 Hirose Y....Ikegawa S. (2008)
    2. Large scale association analysis for identification of genes underlying premature coronary heart disease: cumulative perspective from analysis of 111 candidate genes. (PubMed id 15121769)1, 4, 9 McCarthy J.J....Topol E.J. (2004)
    3. Structure of the calcium-rich signature domain of human thrombospondin-2. (PubMed id 16186819)1, 2, 9 Carlson C.B.... Keck J.L. (2005)
    4. Thrombospondin-2 polymorphism is associated with a reduced risk of premature myocardial infarction. (PubMed id 12482844)1, 4, 9 Boekholdt S.M....Reitsma P.H. (2002)
    5. Disulfide connectivity of recombinant C-terminal region of human thrombospondin 2. (PubMed id 11590138)1, 2, 9 Misenheimer T.M.... Mosher D.F. (2001)
    6. Sequence and characterization of the complete human thrombospondin 2 cDNA: potential regulatory role for the 3' untranslated region. (PubMed id 8406456)1, 2, 9 Labell T.L. and Byers P.H. (1993)
    7. Thrombospondin II: partial cDNA sequence, chromosome location, and expression of a second member of the thrombospondin gene family in humans. (PubMed id 1559694)1, 2 Labell T.L.... Byers P.H. (1992)
    8. Microvessel density and CpG island methylation of the THBS2 gene in malignant ovarian tumors. (PubMed id 18955754)1, 9 Czekierdowski A....Kotarski J. (2008)
    9. Thrombospondin 2 regulates cell proliferation induced by Rac1 redox-dependent signaling. (PubMed id 12861025)1, 9 Lopes N....Kovacic H. (2003)
    10. Biophysical characterization of the signature domains of thrombospondin-4 and thrombospondin-2. (PubMed id 16246837)1, 9 Misenheimer T.M. and Mosher D.F. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7058 HGNC: 11786 AceView: THBS2 Ensembl:ENSG00000186340 euGenes: HUgn7058
    ECgene: THBS2 Kegg: 7058 H-InvDB: THBS2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for THBS2 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for THBS2 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for THBS2 gene:
    Search GeneIP for patents involving THBS2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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