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Aliases for THAP7-AS1 Gene

Subcategory (RNA class) for THAP7-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for THAP7-AS1 Gene

  • THAP7 Antisense RNA 1 2 3
  • THAP7 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for THAP7-AS1 Gene

ORGUL Members for THAP7-AS1 Gene

Previous GeneCards Identifiers for THAP7-AS1 Gene

  • GC22P021358
  • GC22P021448

Summaries for THAP7-AS1 Gene

GeneCards Summary for THAP7-AS1 Gene

THAP7-AS1 (THAP7 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THAP7-AS1 Gene

Genomics for THAP7-AS1 Gene

Genomic Location for THAP7-AS1 Gene

Start:
21,001,886 bp from pter
End:
21,010,374 bp from pter
Size:
8,489 bases
Orientation:
Plus strand

Genomic View for THAP7-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for THAP7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THAP7-AS1 Gene

No data available for Regulatory Elements for THAP7-AS1 Gene

Proteins for THAP7-AS1 Gene

Post-translational modifications for THAP7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THAP7-AS1 Gene

Domains for THAP7-AS1 Gene

Gene Families for THAP7-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with THAP7-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THAP7-AS1 Gene

Function for THAP7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for THAP7-AS1 Gene

Localization for THAP7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for THAP7-AS1 Gene

Pathways for THAP7-AS1 Gene

SuperPathways for THAP7-AS1 Gene

No Data Available

Interacting Proteins for THAP7-AS1 Gene

Gene Ontology (GO) - Biological Process for THAP7-AS1 Gene

None

No data available for Pathways by source for THAP7-AS1 Gene

Transcripts for THAP7-AS1 Gene

Unigene Clusters for THAP7-AS1 Gene

THAP7 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate THAP7-AS1
    • Block miRNA regulation of THAP7-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for THAP7-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for THAP7-AS1 Gene

    No ASD Table

    Relevant External Links for THAP7-AS1 Gene

    GeneLoc Exon Structure for
    THAP7-AS1
    ECgene alternative splicing isoforms for
    THAP7-AS1

    Expression for THAP7-AS1 Gene

    mRNA expression in normal human tissues for THAP7-AS1 Gene

    SOURCE GeneReport for Unigene cluster for THAP7-AS1 Gene Hs.517430

    genes like me logo Genes that share expressions with THAP7-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for THAP7-AS1 Gene

    Orthologs for THAP7-AS1 Gene

    Evolution for THAP7-AS1 Gene

    ENSEMBL:
    Gene Tree for THAP7-AS1 (if available)
    TreeFam:
    Gene Tree for THAP7-AS1 (if available)

    No data available for Orthologs for THAP7-AS1 Gene

    Paralogs for THAP7-AS1 Gene

    No data available for Paralogs for THAP7-AS1 Gene

    Variants for THAP7-AS1 Gene

    Sequence variations from dbSNP and Humsavar for THAP7-AS1 Gene

    SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
    rs370907 -- 21,006,953(+) TTACA(A/T)CTAAG intron-variant
    rs373092 -- 21,007,581(+) GAACT(G/T)GCAAC intron-variant
    rs393658 -- 21,006,277(+) AAAAA(A/C)ACGTT intron-variant
    rs393966 -- 21,006,384(+) gagat(C/T)gtgcc intron-variant
    rs401639 -- 21,005,221(+) aagta(A/G)ctgga intron-variant

    Relevant External Links for THAP7-AS1 Gene

    HapMap Linkage Disequilibrium report
    THAP7-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for THAP7-AS1 Gene

    Disorders for THAP7-AS1 Gene

    No disorders were found for THAP7-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for THAP7-AS1 Gene

    Publications for THAP7-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for THAP7-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate THAP7-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for THAP7-AS1
      • Block miRNA regulation of THAP7-AS1 using miScript Target Protectors

      Sources for THAP7-AS1 Gene

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