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Aliases for THAP7-AS1 Gene

Subcategory (RNA class) for THAP7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THAP7-AS1 Gene

  • THAP7 Antisense RNA 1 2 3 5
  • THAP7 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for THAP7-AS1 Gene

Previous GeneCards Identifiers for THAP7-AS1 Gene

  • GC22P021358
  • GC22P021448

Summaries for THAP7-AS1 Gene

GeneCards Summary for THAP7-AS1 Gene

THAP7-AS1 (THAP7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THAP7-AS1 Gene

Genomics for THAP7-AS1 Gene

Regulatory Elements for THAP7-AS1 Gene

Enhancers for THAP7-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around THAP7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for THAP7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around THAP7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for THAP7-AS1 Gene

Chromosome:
22
Start:
21,001,886 bp from pter
End:
21,010,374 bp from pter
Size:
8,489 bases
Orientation:
Plus strand

Genomic View for THAP7-AS1 Gene

Genes around THAP7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THAP7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THAP7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THAP7-AS1 Gene

Proteins for THAP7-AS1 Gene

Post-translational modifications for THAP7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THAP7-AS1 Gene

Domains & Families for THAP7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THAP7-AS1 Gene

Function for THAP7-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THAP7-AS1 Gene

Localization for THAP7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for THAP7-AS1 Gene

Pathways & Interactions for THAP7-AS1 Gene

SuperPathways for THAP7-AS1 Gene

No Data Available

Interacting Proteins for THAP7-AS1 Gene

Gene Ontology (GO) - Biological Process for THAP7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THAP7-AS1 Gene

Drugs & Compounds for THAP7-AS1 Gene

No Compound Related Data Available

Transcripts for THAP7-AS1 Gene

Unigene Clusters for THAP7-AS1 Gene

THAP7 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for THAP7-AS1 Gene

No ASD Table

Relevant External Links for THAP7-AS1 Gene

GeneLoc Exon Structure for
THAP7-AS1
ECgene alternative splicing isoforms for
THAP7-AS1

Expression for THAP7-AS1 Gene

mRNA expression in normal human tissues for THAP7-AS1 Gene

SOURCE GeneReport for Unigene cluster for THAP7-AS1 Gene Hs.517430

genes like me logo Genes that share expression patterns with THAP7-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for THAP7-AS1 Gene

Orthologs for THAP7-AS1 Gene

Evolution for THAP7-AS1 Gene

ENSEMBL:
Gene Tree for THAP7-AS1 (if available)
TreeFam:
Gene Tree for THAP7-AS1 (if available)

No data available for Orthologs for THAP7-AS1 Gene

Paralogs for THAP7-AS1 Gene

No data available for Paralogs for THAP7-AS1 Gene

Variants for THAP7-AS1 Gene

Sequence variations from dbSNP and Humsavar for THAP7-AS1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs2516531 -- 21,007,485(+) GTGTG(C/T)GTTCA intron-variant
rs2520647 -- 21,006,949(+) CATCT(A/T)ACATC intron-variant
rs2520648 -- 21,007,022(+) GATTT(A/T)ACCCT intron-variant
rs8135590 -- 21,004,765(+) ctgac(C/T)gcacc intron-variant
rs8135728 -- 21,004,872(+) aacct(C/T)ccggg intron-variant

Relevant External Links for THAP7-AS1 Gene

HapMap Linkage Disequilibrium report
THAP7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THAP7-AS1 Gene

Disorders for THAP7-AS1 Gene

Relevant External Links for THAP7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
THAP7-AS1

No disorders were found for THAP7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THAP7-AS1 Gene

Publications for THAP7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for THAP7-AS1 Gene

Sources for THAP7-AS1 Gene

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