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Aliases for THAP5P1 Gene

Aliases for THAP5P1 Gene

  • THAP Domain Containing 5 Pseudogene 1 2 3 5

External Ids for THAP5P1 Gene

Previous GeneCards Identifiers for THAP5P1 Gene

  • GC07M158420

Summaries for THAP5P1 Gene

GeneCards Summary for THAP5P1 Gene

THAP5P1 (THAP Domain Containing 5 Pseudogene 1) is a Pseudogene.

Additional gene information for THAP5P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THAP5P1 Gene

Genomics for THAP5P1 Gene

GeneHancer (GH) Regulatory Elements for THAP5P1 Gene

Promoters and enhancers for THAP5P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I158702 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -80.9 -80935 3.2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 POLR2B NCAPG2 WDR60 ESYT2 THAP5P1 GC07M158623
GH07I158616 Enhancer 0.9 ENCODE 0.4 +5.4 5394 2.2 HDGF PKNOX1 ATF1 NFRKB ZBTB40 ZNF766 ARID2 CREM SMARCA5 CAVIN1 LINC01022 PTPRN2 ESYT2 THAP5P1 GC07M158623 MIR5707
GH07I158648 Enhancer 1 Ensembl ENCODE 0.3 -26.8 -26783 3.3 FOXA2 RARA ETS1 RFX5 TCF12 RCOR1 FOS CEBPB NFIL3 CEBPA ESYT2 THAP5P1 GC07M158623 NCAPG2
GH07I158647 Enhancer 0.8 ENCODE 0.3 -23.8 -23805 0.1 CLOCK FOXA2 ZBTB7B RAD21 RARA EGR1 ZNF143 THAP11 EGR2 SMARCA5 ESYT2 THAP5P1 GC07M158623 NCAPG2
GH07I158655 Enhancer 0.8 ENCODE 0.3 -32.9 -32885 0.9 PKNOX1 BATF KLF5 IRF4 ATF7 ETV6 FOS BCLAF1 IKZF2 RUNX3 NCAPG2 GC07M158623 THAP5P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around THAP5P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THAP5P1 Gene

Genomic Locations for THAP5P1 Gene
chr7:158,622,173-158,623,449
(GRCh38/hg38)
Size:
1,277 bases
Orientation:
Minus strand
chr7:158,414,865-158,416,141
(GRCh37/hg19)

Genomic View for THAP5P1 Gene

Genes around THAP5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THAP5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THAP5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THAP5P1 Gene

Proteins for THAP5P1 Gene

Post-translational modifications for THAP5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THAP5P1 Gene

Domains & Families for THAP5P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THAP5P1 Gene

Function for THAP5P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THAP5P1 Gene

Localization for THAP5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THAP5P1 Gene

Pathways & Interactions for THAP5P1 Gene

SuperPathways for THAP5P1 Gene

No Data Available

Interacting Proteins for THAP5P1 Gene

Gene Ontology (GO) - Biological Process for THAP5P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THAP5P1 Gene

Drugs & Compounds for THAP5P1 Gene

No Compound Related Data Available

Transcripts for THAP5P1 Gene

mRNA/cDNA for THAP5P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for THAP5P1 Gene

No ASD Table

Relevant External Links for THAP5P1 Gene

GeneLoc Exon Structure for
THAP5P1
ECgene alternative splicing isoforms for
THAP5P1

Expression for THAP5P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THAP5P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of THAP5P1 Gene:

THAP5P1
genes like me logo Genes that share expression patterns with THAP5P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THAP5P1 Gene

Orthologs for THAP5P1 Gene

Evolution for THAP5P1 Gene

ENSEMBL:
Gene Tree for THAP5P1 (if available)
TreeFam:
Gene Tree for THAP5P1 (if available)

No data available for Orthologs for THAP5P1 Gene

Paralogs for THAP5P1 Gene

No data available for Paralogs for THAP5P1 Gene

Variants for THAP5P1 Gene

Additional Variant Information for THAP5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THAP5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THAP5P1 Gene

Disorders for THAP5P1 Gene

Additional Disease Information for THAP5P1

No disorders were found for THAP5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THAP5P1 Gene

Publications for THAP5P1 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 3 58

Products for THAP5P1 Gene

Sources for THAP5P1 Gene

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