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Aliases for TGIF2LY Gene

Aliases for TGIF2LY Gene

  • TGFB Induced Factor Homeobox 2 Like, Y-Linked 2 3
  • TGFB-Induced Factor Homeobox 2-Like, Y-Linked 2 3 5
  • TGF-Beta-Induced Transcription Factor 2-Like Protein 3 4
  • TGFB-Induced Factor 2-Like Protein, Y-Linked 3 4
  • TGFB-Induced Factor 2-Like, Y-Linked 2 3
  • TGIF-Like On The Y 3 4
  • TGIFLY 3 4

External Ids for TGIF2LY Gene

Previous GeneCards Identifiers for TGIF2LY Gene

  • GC0YP003412
  • GC0YP003150
  • GC0YP003490
  • GC0YP003447

Summaries for TGIF2LY Gene

Entrez Gene Summary for TGIF2LY Gene

  • This gene encodes a member of the TALE/TGIF homeobox family of transcription factors. This gene lies within the male specific region of chromosome Y, in a block of sequence that is thought to be the result of a large X-to-Y transposition. The C-terminus of this protein is divergent from that of its chromosome X homolog (TGIF2LX), suggesting that this protein may act as a regulator of TGIF2LX. [provided by RefSeq, Jul 2008]

GeneCards Summary for TGIF2LY Gene

TGIF2LY (TGFB Induced Factor Homeobox 2 Like, Y-Linked) is a Protein Coding gene. An important paralog of this gene is PKNOX1.

UniProtKB/Swiss-Prot for TGIF2LY Gene

  • May have a transcription role in testis. May act as a competitor/regulator of TGIF2LX.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TGIF2LY Gene

Genomics for TGIF2LY Gene

Regulatory Elements for TGIF2LY Gene


Genomic Location for TGIF2LY Gene

Chromosome:
Y
Start:
3,579,041 bp from pter
End:
3,580,041 bp from pter
Size:
1,001 bases
Orientation:
Plus strand

Genomic View for TGIF2LY Gene

Genes around TGIF2LY on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TGIF2LY Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TGIF2LY Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TGIF2LY Gene

Proteins for TGIF2LY Gene

  • Protein details for TGIF2LY Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IUE0-TF2LY_HUMAN
    Recommended name:
    Homeobox protein TGIF2LY
    Protein Accession:
    Q8IUE0
    Secondary Accessions:
    • A2VCU1

    Protein attributes for TGIF2LY Gene

    Size:
    185 amino acids
    Molecular mass:
    20814 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TGIF2LY Gene

Proteomics data for TGIF2LY Gene at MOPED

Post-translational modifications for TGIF2LY Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TGIF2LY Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TGIF2LY Gene

Domains & Families for TGIF2LY Gene

Gene Families for TGIF2LY Gene

Protein Domains for TGIF2LY Gene

Suggested Antigen Peptide Sequences for TGIF2LY Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IUE0

UniProtKB/Swiss-Prot:

TF2LY_HUMAN :
  • Contains 1 homeobox DNA-binding domain.
  • Belongs to the TALE/TGIF homeobox family.
Domain:
  • Contains 1 homeobox DNA-binding domain.
Family:
  • Belongs to the TALE/TGIF homeobox family.
genes like me logo Genes that share domains with TGIF2LY: view

Function for TGIF2LY Gene

Molecular function for TGIF2LY Gene

UniProtKB/Swiss-Prot Function:
May have a transcription role in testis. May act as a competitor/regulator of TGIF2LX.

Phenotypes for TGIF2LY Gene

GenomeRNAi human phenotypes for TGIF2LY:
genes like me logo Genes that share phenotypes with TGIF2LY: view

Animal Model Products

CRISPR Products

miRNA for TGIF2LY Gene

miRTarBase miRNAs that target TGIF2LY

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TGIF2LY Gene

Localization for TGIF2LY Gene

Subcellular locations from UniProtKB/Swiss-Prot for TGIF2LY Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TGIF2LY Gene COMPARTMENTS Subcellular localization image for TGIF2LY gene
Compartment Confidence
nucleus 5
cytosol 2

No data available for Gene Ontology (GO) - Cellular Components for TGIF2LY Gene

Pathways & Interactions for TGIF2LY Gene

SuperPathways for TGIF2LY Gene

No Data Available

Gene Ontology (GO) - Biological Process for TGIF2LY Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TGIF2LY Gene

Drugs & Compounds for TGIF2LY Gene

No Compound Related Data Available

Transcripts for TGIF2LY Gene

mRNA/cDNA for TGIF2LY Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(14) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TGIF2LY Gene

TGFB-induced factor homeobox 2-like, Y-linked:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TGIF2LY Gene

No ASD Table

Relevant External Links for TGIF2LY Gene

GeneLoc Exon Structure for
TGIF2LY
ECgene alternative splicing isoforms for
TGIF2LY

Expression for TGIF2LY Gene

mRNA expression in normal human tissues for TGIF2LY Gene

mRNA differential expression in normal tissues according to GTEx for TGIF2LY Gene

This gene is overexpressed in Testis (x52.6).

Protein differential expression in normal tissues from HIPED for TGIF2LY Gene

This gene is overexpressed in Islet of Langerhans (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for TGIF2LY Gene



SOURCE GeneReport for Unigene cluster for TGIF2LY Gene Hs.112148

mRNA Expression by UniProt/SwissProt for TGIF2LY Gene

Q8IUE0-TF2LY_HUMAN
Tissue specificity: Specifically expressed in adult testis.
genes like me logo Genes that share expression patterns with TGIF2LY: view

Protein tissue co-expression partners for TGIF2LY Gene

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for TGIF2LY Gene

Orthologs for TGIF2LY Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TGIF2LY Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 36
  • 37 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Tgif2lx1 36
  • 23 (a)
ManyToMany
Tgif2lx2 36
  • 23 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia TGIF2LX 36
  • 64 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta achi 36
  • 9 (a)
ManyToMany
vis 36
  • 9 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CUP9 36
  • 12 (a)
ManyToMany
TOS8 36
  • 11 (a)
ManyToMany
Species with no ortholog for TGIF2LY:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TGIF2LY Gene

ENSEMBL:
Gene Tree for TGIF2LY (if available)
TreeFam:
Gene Tree for TGIF2LY (if available)

Paralogs for TGIF2LY Gene

Paralogs for TGIF2LY Gene

(10) SIMAP similar genes for TGIF2LY Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TGIF2LY: view

Variants for TGIF2LY Gene

Sequence variations from dbSNP and Humsavar for TGIF2LY Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs1053786 -- 3,579,810(+) CAGCC(A/G)AAGAA utr-variant-3-prime
rs1053787 -- 3,579,826(+) TCAAG(A/G)TTTCT utr-variant-3-prime
rs1053788 -- 3,579,837(+) ATCAC(A/T)TCCCC utr-variant-3-prime
rs1053790 -- 3,579,874(+) AGGAG(C/T)ACGCC utr-variant-3-prime
rs1053791 -- 3,579,923(+) ACAAA(C/G)GGCTG utr-variant-3-prime

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TGIF2LY Gene

Disorders for TGIF2LY Gene

Relevant External Links for TGIF2LY

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TGIF2LY

No disorders were found for TGIF2LY Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TGIF2LY Gene

Publications for TGIF2LY Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 4 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  3. An atlas of combinatorial transcriptional regulation in mouse and man. (PMID: 20211142) Ravasi T. … Hayashizaki Y. (Cell 2010) 3
  4. Proteomic and biochemical analysis of 14-3-3-binding proteins during C2-ceramide-induced apoptosis. (PMID: 20618440) Pozuelo-Rubio M. (FEBS J. 2010) 3
  5. Association of TGIFLX/Y mRNA expression with prostate cancer. (PMID: 18663611) Ousati Ashtiani Z. … Heidari M. (Med. Oncol. 2009) 3

Products for TGIF2LY Gene

Sources for TGIF2LY Gene

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