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Aliases for TFDP1P Gene

Aliases for TFDP1P Gene

  • Transcription Factor Dp-1 Pseudogene 2 3
  • RP11-385M4.3 5

External Ids for TFDP1P Gene

Previous GeneCards Identifiers for TFDP1P Gene

  • GC01U990167
  • GC01P207473
  • GC01P209406

Summaries for TFDP1P Gene

GeneCards Summary for TFDP1P Gene

TFDP1P (Transcription Factor Dp-1 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TFDP1P Gene

Genomics for TFDP1P Gene

Regulatory Elements for TFDP1P Gene

Enhancers for TFDP1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F209207 0.9 Ensembl ENCODE 27.3 -24.3 -24334 1.2 CTCF PKNOX1 ZNF654 RAD21 YY1 ZFHX2 JUND GABPB1 SMC3 PRDM10 TFDP1P MIR205 MIR205HG LOC100652908
GH01F209354 1.4 FANTOM5 Ensembl ENCODE 10.7 +123.7 123674 3.5 CTCF TFAP4 WRNIP1 ZNF384 YBX1 PLRG1 RAD21 RFX5 ZNF316 GATA3 MIR205 MIR205HG TFDP1P ENSG00000224260 IRF6 LAMB3 LINC01698 LINC01696
GH01F209199 0.4 ENCODE 26.9 -32.3 -32303 1.5 ZIC2 TFDP1P MIR205 MIR205HG LOC100652908
GH01F209154 0.5 ENCODE 17.1 -74.8 -74815 5.0 SMARCA4 POLR2A TEAD4 TFDP1P LOC100509303 LOC100652908
GH01F209382 1.3 FANTOM5 Ensembl ENCODE 6.3 +154.7 154698 8.8 JUN BHLHE40 MCM5 CEBPB SIN3A ZNF704 EP300 GATA3 JUND SMARCA4 LAMB3 SERTAD4-AS1 MIR205 MIR205HG IRF6 TFDP1P LINC01698
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TFDP1P on UCSC Golden Path with GeneCards custom track

Genomic Location for TFDP1P Gene

Chromosome:
1
Start:
209,232,113 bp from pter
End:
209,234,517 bp from pter
Size:
2,405 bases
Orientation:
Plus strand

Genomic View for TFDP1P Gene

Genes around TFDP1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TFDP1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TFDP1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TFDP1P Gene

Proteins for TFDP1P Gene

Post-translational modifications for TFDP1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TFDP1P Gene

Domains & Families for TFDP1P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TFDP1P Gene

Function for TFDP1P Gene

Molecular function for TFDP1P Gene

GENATLAS Biochemistry:
TFDP1 pseudogene

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TFDP1P Gene

Localization for TFDP1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TFDP1P Gene

Pathways & Interactions for TFDP1P Gene

SuperPathways for TFDP1P Gene

No Data Available

Interacting Proteins for TFDP1P Gene

Gene Ontology (GO) - Biological Process for TFDP1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TFDP1P Gene

Transcripts for TFDP1P Gene

mRNA/cDNA for TFDP1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TFDP1P Gene

No ASD Table

Relevant External Links for TFDP1P Gene

GeneLoc Exon Structure for
TFDP1P
ECgene alternative splicing isoforms for
TFDP1P

Expression for TFDP1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TFDP1P Gene

mRNA differential expression in normal tissues according to GTEx for TFDP1P Gene

This gene is overexpressed in Testis (x50.7).

NURSA nuclear receptor signaling pathways regulating expression of TFDP1P Gene:

TFDP1P
genes like me logo Genes that share expression patterns with TFDP1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TFDP1P Gene

Orthologs for TFDP1P Gene

Evolution for TFDP1P Gene

ENSEMBL:
Gene Tree for TFDP1P (if available)
TreeFam:
Gene Tree for TFDP1P (if available)

No data available for Orthologs for TFDP1P Gene

Paralogs for TFDP1P Gene

No data available for Paralogs for TFDP1P Gene

Variants for TFDP1P Gene

Relevant External Links for TFDP1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TFDP1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TFDP1P Gene

Disorders for TFDP1P Gene

Relevant External Links for TFDP1P

Genetic Association Database (GAD)
TFDP1P

No disorders were found for TFDP1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TFDP1P Gene

Publications for TFDP1P Gene

  1. Genomic cloning and chromosomal assignment of the E2F dimerization partner TFDP gene family. (PMID: 9027491) Zhang Y. … Chellappan S.P. (Genomics 1997) 2 3 64
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64

Products for TFDP1P Gene

Sources for TFDP1P Gene

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