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Aliases for TEX9 Gene

Aliases for TEX9 Gene

  • Testis Expressed 9 2 3 5
  • Testis Expressed Sequence 9 2

External Ids for TEX9 Gene

Previous GeneCards Identifiers for TEX9 Gene

  • GC15P054445
  • GC15P056658
  • GC15P033481
  • GC15P056536

Summaries for TEX9 Gene

GeneCards Summary for TEX9 Gene

TEX9 (Testis Expressed 9) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX9 Gene

Genomics for TEX9 Gene

Regulatory Elements for TEX9 Gene

Enhancers for TEX9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G056240 1.7 Ensembl ENCODE dbSUPER 10.1 -0.4 -443 6.3 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D RFX7 TEX9
GH15G056320 0.9 ENCODE 15.5 +76.6 76589 0.2 HDAC1 ATF1 TBL1XR1 ARNT CHAMP1 TCF12 GATA2 NCOA1 ZEB2 NFIC TEX9 RFX7 HMGB1P33 RNU6-1287P GC15M056383
GH15G056207 0.9 Ensembl ENCODE 9.2 -35.7 -35702 2.3 CBFB NR2F1 ZNF133 ARID3A STAT3 TCF7 ETV6 NR2F6 SPI1 ZNF558 RFX7 TEX9 GC15M056546
GH15G056491 0.9 ENCODE 8.9 +247.3 247309 0.2 ATF1 PKNOX1 RAD21 RFX5 ZNF766 GATA2 ELK1 ZNF143 KLF13 DEK TEX9 LOC105370831 LOC105370832
GH15G056327 0.4 ENCODE 16.3 +83.9 83899 0.2 CEBPB REST TEX9 HMGB1P33 ENSG00000259941
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TEX9 on UCSC Golden Path with GeneCards custom track

Promoters for TEX9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000076897 -1008 3600 CREB3L1 SIN3A ETS1 KDM4B ZNF263 NFYC SMARCB1 ZNF592 SREBF1 ZNF610
ENSR00000277644 1991 401 ARNT WRNIP1 ARID4B SIN3A ZNF2 YY1 ZNF766 CBX5 ZNF207 ZNF143

Genomic Location for TEX9 Gene

Chromosome:
15
Start:
56,244,009 bp from pter
End:
56,459,738 bp from pter
Size:
215,730 bases
Orientation:
Plus strand

Genomic View for TEX9 Gene

Genes around TEX9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX9 Gene

Proteins for TEX9 Gene

  • Protein details for TEX9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N6V9-TEX9_HUMAN
    Recommended name:
    Testis-expressed protein 9
    Protein Accession:
    Q8N6V9
    Secondary Accessions:
    • B4DH73

    Protein attributes for TEX9 Gene

    Size:
    391 amino acids
    Molecular mass:
    44826 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TEX9 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TEX9 Gene

Post-translational modifications for TEX9 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TEX9 Gene

Domains & Families for TEX9 Gene

Protein Domains for TEX9 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TEX9 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TEX9: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TEX9 Gene

Function for TEX9 Gene

Gene Ontology (GO) - Molecular Function for TEX9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 23455924
genes like me logo Genes that share ontologies with TEX9: view

Phenotypes for TEX9 Gene

genes like me logo Genes that share phenotypes with TEX9: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TEX9 Gene

Localization for TEX9 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TEX9 gene
Compartment Confidence
cytosol 3
plasma membrane 2
mitochondrion 2
nucleus 2
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TEX9 Gene

Pathways & Interactions for TEX9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TEX9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX9 Gene

Drugs & Compounds for TEX9 Gene

No Compound Related Data Available

Transcripts for TEX9 Gene

Unigene Clusters for TEX9 Gene

Testis expressed 9:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TEX9 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5
SP1:
SP2:

Relevant External Links for TEX9 Gene

GeneLoc Exon Structure for
TEX9
ECgene alternative splicing isoforms for
TEX9

Expression for TEX9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TEX9 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

NURSA nuclear receptor signaling pathways regulating expression of TEX9 Gene:

TEX9

SOURCE GeneReport for Unigene cluster for TEX9 Gene:

Hs.511476
genes like me logo Genes that share expression patterns with TEX9: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX9 Gene

Orthologs for TEX9 Gene

This gene was present in the common ancestor of animals.

Orthologs for TEX9 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX9 34 35
  • 99.57 (n)
dog
(Canis familiaris)
Mammalia TEX9 34 35
  • 88.63 (n)
mouse
(Mus musculus)
Mammalia Tex9 34 16 35
  • 81.35 (n)
rat
(Rattus norvegicus)
Mammalia Tex9 34
  • 80.79 (n)
cow
(Bos Taurus)
Mammalia TEX9 35
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TEX9 35
  • 70 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TEX9 35
  • 55 (a)
OneToOne
chicken
(Gallus gallus)
Aves TEX9 34 35
  • 68.82 (n)
lizard
(Anolis carolinensis)
Reptilia TEX9 35
  • 59 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tex9 34
  • 64.64 (n)
Str.8011 34
zebrafish
(Danio rerio)
Actinopterygii tex9 34 35
  • 63.06 (n)
Dr.14425 34
fruit fly
(Drosophila melanogaster)
Insecta CG4681 35
  • 20 (a)
OneToOne
Species where no ortholog for TEX9 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TEX9 Gene

ENSEMBL:
Gene Tree for TEX9 (if available)
TreeFam:
Gene Tree for TEX9 (if available)

Paralogs for TEX9 Gene

No data available for Paralogs for TEX9 Gene

Variants for TEX9 Gene

Sequence variations from dbSNP and Humsavar for TEX9 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000023636 -- 56,344,119(+) TTGAA(A/G)TGGTT intron-variant
rs1000024274 -- 56,395,093(+) AAAAG(A/G)TACTT intron-variant
rs1000027518 -- 56,308,715(+) TTTTA(A/G)ATTAA intron-variant
rs1000038527 -- 56,261,577(+) GCCAG(A/G)CGCAG intron-variant
rs1000051844 -- 56,423,991(+) TATGT(C/G)TCTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX9 Gene

Variant ID Type Subtype PubMed ID
dgv10n31 CNV loss 19718026
esv1244240 CNV insertion 17803354
esv24258 CNV loss 19812545
esv2525559 CNV loss 19546169
esv2660653 CNV deletion 23128226
esv2665975 CNV deletion 23128226
esv2760033 CNV loss 17122850
esv3394916 CNV insertion 20981092
esv35150 CNV loss 17911159
esv3636583 CNV loss 21293372
esv3636584 CNV loss 21293372
esv3636585 CNV loss 21293372
esv3892699 CNV gain 25118596
esv9273 CNV gain 19470904
nsv1545 CNV deletion 18451855
nsv433294 CNV loss 18776910
nsv498847 CNV loss 21111241
nsv510662 CNV deletion 20534489
nsv9270 CNV loss 18304495

Variation tolerance for TEX9 Gene

Residual Variation Intolerance Score: 47% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.50; 43.76% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TEX9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TEX9 Gene

Disorders for TEX9 Gene

Relevant External Links for TEX9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TEX9

No disorders were found for TEX9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX9 Gene

Publications for TEX9 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  2. Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing. (PMID: 26871637) Yang X. … Vidal M. (Cell 2016) 3 64
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  4. A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface. (PMID: 26638075) Gupta G.D. … Pelletier L. (Cell 2015) 3 64
  5. Clozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles. (PMID: 25187353) Goldstein J.I. … Sullivan P.F. (Nat Commun 2014) 3 64

Products for TEX9 Gene

Sources for TEX9 Gene

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