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Aliases for TEX9 Gene

Aliases for TEX9 Gene

  • Testis Expressed 9 2 3
  • Testis Expressed Sequence 9 2

External Ids for TEX9 Gene

Summaries for TEX9 Gene

GeneCards Summary for TEX9 Gene

TEX9 (Testis Expressed 9) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX9 Gene

Genomics for TEX9 Gene

Genomic Location for TEX9 Gene

Start:
56,244,009 bp from pter
End:
56,445,997 bp from pter
Size:
201,989 bases
Orientation:
Plus strand

Genomic View for TEX9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TEX9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX9 Gene

Regulatory Elements for TEX9 Gene

Proteins for TEX9 Gene

  • Protein details for TEX9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N6V9-TEX9_HUMAN
    Recommended name:
    Testis-expressed sequence 9 protein
    Protein Accession:
    Q8N6V9
    Secondary Accessions:
    • B4DH73

    Protein attributes for TEX9 Gene

    Size:
    391 amino acids
    Molecular mass:
    44826 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TEX9 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TEX9 Gene

Proteomics data for TEX9 Gene at MOPED

Post-translational modifications for TEX9 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TEX9 Gene

Domains for TEX9 Gene

Protein Domains for TEX9 Gene

ProtoNet:
genes like me logo Genes that share domains with TEX9: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TEX9 Gene

Function for TEX9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TEX9 Gene

Localization for TEX9 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TEX9 Gene COMPARTMENTS Subcellular localization image for TEX9 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for TEX9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane --
genes like me logo Genes that share ontologies with TEX9: view

Pathways for TEX9 Gene

SuperPathways for TEX9 Gene

No Data Available

Interacting Proteins for TEX9 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000342169%0d%0a9606.ENSP00000368931%0d%0a
Selected Interacting proteins: Q8N6V9-TEX9_HUMAN ENSP00000342169 for TEX9 Gene via MINT STRING I2D

Gene Ontology (GO) - Biological Process for TEX9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016192 vesicle-mediated transport --
genes like me logo Genes that share ontologies with TEX9: view

No data available for Pathways by source for TEX9 Gene

Transcripts for TEX9 Gene

Unigene Clusters for TEX9 Gene

Testis expressed 9:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TEX9 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5
SP1:
SP2:

Relevant External Links for TEX9 Gene

GeneLoc Exon Structure for
TEX9
ECgene alternative splicing isoforms for
TEX9

Expression for TEX9 Gene

mRNA expression in normal human tissues for TEX9 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for TEX9 Gene Hs.511476

genes like me logo Genes that share expressions with TEX9: view

Orthologs for TEX9 Gene

This gene was present in the common ancestor of animals.

Orthologs for TEX9 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX9 36
  • 99.57 (n)
  • 99.23 (a)
TEX9 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TEX9 37
  • 73 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TEX9 36
  • 88.63 (n)
  • 84.36 (a)
TEX9 37
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tex9 36
  • 81.35 (n)
  • 76.94 (a)
Tex9 16
Tex9 37
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TEX9 37
  • 70 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TEX9 37
  • 55 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tex9 36
  • 80.79 (n)
  • 76.74 (a)
chicken
(Gallus gallus)
Aves TEX9 36
  • 68.82 (n)
  • 59.68 (a)
TEX9 37
  • 57 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TEX9 37
  • 59 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.8011 36
tex9 36
  • 64.64 (n)
  • 63.23 (a)
zebrafish
(Danio rerio)
Actinopterygii Dr.14425 36
tex9 36
  • 63.06 (n)
  • 58.69 (a)
tex9 37
  • 47 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG4681 37
  • 20 (a)
OneToOne
Species with no ortholog for TEX9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TEX9 Gene

ENSEMBL:
Gene Tree for TEX9 (if available)
TreeFam:
Gene Tree for TEX9 (if available)

Paralogs for TEX9 Gene

No data available for Paralogs for TEX9 Gene

Variants for TEX9 Gene

Sequence variations from dbSNP and Humsavar for TEX9 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs724099 -- 56,358,145(-) GCAAT(A/G)TGGAA intron-variant
rs724100 -- 56,357,715(-) CATAT(G/T)TGTTG intron-variant
rs767142 -- 56,398,180(-) TTTAC(C/T)TTATA intron-variant
rs795781 -- 56,422,711(+) gttca(C/G)tagtg intron-variant
rs795782 -- 56,423,062(+) ttgag(C/T)tgctt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX9 Gene

Variant ID Type Subtype PubMed ID
nsv1545 CNV Loss 18451855
dgv10n31 CNV Deletion 19718026
nsv904246 CNV Loss 21882294
nsv498847 CNV Loss 21111241
esv2525559 CNV Loss 19546169
nsv433294 CNV Loss 18776910
esv35150 CNV Loss 17911159
esv2665975 CNV Deletion 23128226
nsv510662 CNV Loss 20534489
nsv9270 CNV Loss 18304495
esv1244240 CNV Insertion 17803354
esv2660653 CNV Deletion 23128226
esv24258 CNV Loss 19812545
dgv749e1 CNV Complex 17122850

Relevant External Links for TEX9 Gene

HapMap Linkage Disequilibrium report
TEX9

Disorders for TEX9 Gene

No disorders were found for TEX9 Gene.

No data available for UniProtKB/Swiss-Prot for TEX9 Gene

Publications for TEX9 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  3. A Y2H-seq approach defines the human protein methyltransferase interactome. (PMID: 23455924) Weimann M. … Stelzl U. (Nat. Methods 2013) 3
  4. Common variants in left/right asymmetry genes and pathways are associated with relative hand skill. (PMID: 24068947) Brandler W.M. … Paracchini S. (PLoS Genet. 2013) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for TEX9 Gene

Sources for TEX9 Gene

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