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Aliases for TEX9 Gene

Aliases for TEX9 Gene

  • Testis Expressed 9 2 3
  • Testis Expressed Sequence 9 2

External Ids for TEX9 Gene

Previous GeneCards Identifiers for TEX9 Gene

  • GC15P054445
  • GC15P056658
  • GC15P033481
  • GC15P056536

Summaries for TEX9 Gene

GeneCards Summary for TEX9 Gene

TEX9 (Testis Expressed 9) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX9 Gene

Genomics for TEX9 Gene

Regulatory Elements for TEX9 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for TEX9 Gene

Chromosome:
15
Start:
56,244,009 bp from pter
End:
56,459,738 bp from pter
Size:
215,730 bases
Orientation:
Plus strand

Genomic View for TEX9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TEX9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX9 Gene

Proteins for TEX9 Gene

  • Protein details for TEX9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N6V9-TEX9_HUMAN
    Recommended name:
    Testis-expressed sequence 9 protein
    Protein Accession:
    Q8N6V9
    Secondary Accessions:
    • B4DH73

    Protein attributes for TEX9 Gene

    Size:
    391 amino acids
    Molecular mass:
    44826 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TEX9 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TEX9 Gene

Proteomics data for TEX9 Gene at MOPED

Post-translational modifications for TEX9 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for TEX9 Gene

Domains & Families for TEX9 Gene

Protein Domains for TEX9 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TEX9 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TEX9: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TEX9 Gene

Function for TEX9 Gene

Phenotypes for TEX9 Gene

GenomeRNAi human phenotypes for TEX9:
genes like me logo Genes that share phenotypes with TEX9: view

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TEX9

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for TEX9 Gene

Localization for TEX9 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TEX9 Gene COMPARTMENTS Subcellular localization image for TEX9 gene
Compartment Confidence
cytosol 2
plasma membrane 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TEX9 Gene

Pathways & Interactions for TEX9 Gene

SuperPathways for TEX9 Gene

No Data Available

Interacting Proteins for TEX9 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000342169%0d%0a9606.ENSP00000368931%0d%0a
Selected Interacting proteins: Q8N6V9-TEX9_HUMAN ENSP00000342169 for TEX9 Gene via MINT I2D STRING

Gene Ontology (GO) - Biological Process for TEX9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX9 Gene

Drugs & Compounds for TEX9 Gene

No Compound Related Data Available

Transcripts for TEX9 Gene

Unigene Clusters for TEX9 Gene

Testis expressed 9:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TEX9

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TEX9 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5
SP1:
SP2:

Relevant External Links for TEX9 Gene

GeneLoc Exon Structure for
TEX9
ECgene alternative splicing isoforms for
TEX9

Expression for TEX9 Gene

mRNA expression in normal human tissues for TEX9 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for TEX9 Gene Hs.511476

genes like me logo Genes that share expression patterns with TEX9: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TEX9 Gene

Orthologs for TEX9 Gene

This gene was present in the common ancestor of animals.

Orthologs for TEX9 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia TEX9 35
  • 88.63 (n)
  • 84.36 (a)
TEX9 36
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tex9 35
  • 81.35 (n)
  • 76.94 (a)
Tex9 16
Tex9 36
  • 77 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia TEX9 35
  • 99.57 (n)
  • 99.23 (a)
TEX9 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tex9 35
  • 80.79 (n)
  • 76.74 (a)
cow
(Bos Taurus)
Mammalia TEX9 36
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TEX9 36
  • 70 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TEX9 36
  • 55 (a)
OneToOne
chicken
(Gallus gallus)
Aves TEX9 35
  • 68.82 (n)
  • 59.68 (a)
TEX9 36
  • 57 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TEX9 36
  • 59 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.8011 35
tex9 35
  • 64.64 (n)
  • 63.23 (a)
zebrafish
(Danio rerio)
Actinopterygii Dr.14425 35
tex9 35
  • 63.06 (n)
  • 58.69 (a)
tex9 36
  • 47 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG4681 36
  • 20 (a)
OneToOne
Species with no ortholog for TEX9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TEX9 Gene

ENSEMBL:
Gene Tree for TEX9 (if available)
TreeFam:
Gene Tree for TEX9 (if available)

Paralogs for TEX9 Gene

No data available for Paralogs for TEX9 Gene

Variants for TEX9 Gene

Sequence variations from dbSNP and Humsavar for TEX9 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs724099 -- 56,358,145(-) GCAAT(A/G)TGGAA intron-variant
rs724100 -- 56,357,715(-) CATAT(G/T)TGTTG intron-variant
rs767142 -- 56,398,180(-) TTTAC(C/T)TTATA intron-variant
rs795781 -- 56,422,711(+) gttca(C/G)tagtg intron-variant
rs795782 -- 56,423,062(+) ttgag(C/T)tgctt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX9 Gene

Variant ID Type Subtype PubMed ID
nsv1545 CNV Loss 18451855
dgv10n31 CNV Deletion 19718026
nsv904246 CNV Loss 21882294
nsv498847 CNV Loss 21111241
esv2525559 CNV Loss 19546169
nsv433294 CNV Loss 18776910
esv35150 CNV Loss 17911159
esv2665975 CNV Deletion 23128226
nsv510662 CNV Loss 20534489
nsv9270 CNV Loss 18304495
esv1244240 CNV Insertion 17803354
esv2660653 CNV Deletion 23128226
esv24258 CNV Loss 19812545
dgv749e1 CNV Complex 17122850

Variation tolerance for TEX9 Gene

Residual Variation Intolerance Score: 46.96% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.50; 43.76% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TEX9 Gene

HapMap Linkage Disequilibrium report
TEX9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TEX9 Gene

Disorders for TEX9 Gene

Relevant External Links for TEX9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TEX9
genes like me logo Genes that share disorders with TEX9: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX9 Gene

Publications for TEX9 Gene

  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 67
  2. Clozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles. (PMID: 25187353) Goldstein J.I. … Sullivan P.F. (Nat Commun 2014) 67
  3. Common variants in left/right asymmetry genes and pathways are associated with relative hand skill. (PMID: 24068947) Brandler W.M. … Paracchini S. (PLoS Genet. 2013) 67
  4. A Y2H-seq approach defines the human protein methyltransferase interactome. (PMID: 23455924) Weimann M. … Stelzl U. (Nat. Methods 2013) 67
  5. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 67

Products for TEX9 Gene

Sources for TEX9 Gene

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