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Aliases for TEX28P2 Gene

Aliases for TEX28P2 Gene

  • Testis Expressed 28 Pseudogene 2 2 3 5
  • TEX28 TEX28P1 TEX28P2 4
  • CXorf2B 3
  • CXorf2 4
  • PTEX 3

External Ids for TEX28P2 Gene

Previous GeneCards Identifiers for TEX28P2 Gene

  • GC0XM153078
  • GC0XM153425
  • GC0XM142077

Summaries for TEX28P2 Gene

GeneCards Summary for TEX28P2 Gene

TEX28P2 (Testis Expressed 28 Pseudogene 2) is a Pseudogene. Diseases associated with TEX28P2 include red color blindness and red-green color blindness.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX28P2 Gene

Genomics for TEX28P2 Gene

Regulatory Elements for TEX28P2 Gene

Enhancers for TEX28P2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TEX28P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TEX28P2 Gene

Chromosome:
X
Start:
154,159,207 bp from pter
End:
154,180,155 bp from pter
Size:
20,949 bases
Orientation:
Minus strand

Genomic View for TEX28P2 Gene

Genes around TEX28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX28P2 Gene

Proteins for TEX28P2 Gene

  • Protein details for TEX28P2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O15482-TEX28_HUMAN
    Recommended name:
    Testis-specific protein TEX28
    Protein Accession:
    O15482
    Secondary Accessions:
    • B1B1E8
    • D3DWW5

    Protein attributes for TEX28P2 Gene

    Size:
    410 amino acids
    Molecular mass:
    46131 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX28P2 Gene

Proteomics data for TEX28P2 Gene at MOPED

Post-translational modifications for TEX28P2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TEX28P2 Gene

Domains & Families for TEX28P2 Gene

Protein Domains for TEX28P2 Gene

Graphical View of Domain Structure for InterPro Entry

O15482

UniProtKB/Swiss-Prot:

TEX28_HUMAN :
  • Belongs to the TEX28 family.
Family:
  • Belongs to the TEX28 family.
genes like me logo Genes that share domains with TEX28P2: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TEX28P2 Gene

Function for TEX28P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX28P2 Gene

Localization for TEX28P2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TEX28P2 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TEX28P2 Gene COMPARTMENTS Subcellular localization image for TEX28P2 gene
Compartment Confidence
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
cytosol 1
mitochondrion 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for TEX28P2 Gene

Pathways & Interactions for TEX28P2 Gene

SuperPathways for TEX28P2 Gene

No Data Available

Interacting Proteins for TEX28P2 Gene

Selected Interacting proteins: O15482-TEX28_HUMAN for TEX28P2 Gene via MINT I2D

Symbol External ID(s) Details
EPS8

Gene Ontology (GO) - Biological Process for TEX28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX28P2 Gene

Drugs & Compounds for TEX28P2 Gene

No Compound Related Data Available

Transcripts for TEX28P2 Gene

mRNA/cDNA for TEX28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEX28P2 Gene

No ASD Table

Relevant External Links for TEX28P2 Gene

GeneLoc Exon Structure for
TEX28P2
ECgene alternative splicing isoforms for
TEX28P2

Expression for TEX28P2 Gene

mRNA expression in normal human tissues for TEX28P2 Gene

Protein differential expression in normal tissues from HIPED for TEX28P2 Gene

This gene is overexpressed in Serum (46.1), Amniocyte (13.6), and Plasma (8.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TEX28P2 Gene



mRNA Expression by UniProt/SwissProt for TEX28P2 Gene

O15482-TEX28_HUMAN
Tissue specificity: Testis specific.
genes like me logo Genes that share expression patterns with TEX28P2: view

Protein tissue co-expression partners for TEX28P2 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for TEX28P2 Gene

Orthologs for TEX28P2 Gene

Evolution for TEX28P2 Gene

ENSEMBL:
Gene Tree for TEX28P2 (if available)
TreeFam:
Gene Tree for TEX28P2 (if available)

No data available for Orthologs for TEX28P2 Gene

Paralogs for TEX28P2 Gene

(1) SIMAP similar genes for TEX28P2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TEX28P2: view

No data available for Paralogs for TEX28P2 Gene

Variants for TEX28P2 Gene

Relevant External Links for TEX28P2 Gene

HapMap Linkage Disequilibrium report
TEX28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX28P2 Gene

Disorders for TEX28P2 Gene

MalaCards: The human disease database

(4) MalaCards diseases for TEX28P2 Gene - From: DISEASES

Disorder Aliases PubMed IDs
red color blindness
  • protan defect
red-green color blindness
  • deutan defect
blue cone monochromacy
  • blue cone monochromatism
parasitic protozoa infectious disease
  • mastigophora infectious disease
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with TEX28P2: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for TEX28P2 Gene

Publications for TEX28P2 Gene

  1. Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome. (PMID: 16382448) Chen Y.-T. … Jongeneel C.V. (Genes Chromosomes Cancer 2006) 2 3 67
  2. An insertion/deletion TEX28 polymorphism and its application to analysis of red/green visual pigment gene arrays. (PMID: 15378397) Ueyama H. … Yamade S. (J. Hum. Genet. 2004) 2 3
  3. Identification of a gene within the tandem array of red and green color pigment genes. (PMID: 9268643) Hanna M.C. … Kirkness E.F. (Genomics 1997) 3

Products for TEX28P2 Gene

Sources for TEX28P2 Gene

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