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Aliases for TEX28P1 Gene

Aliases for TEX28P1 Gene

  • Testis Expressed 28 Pseudogene 1 2 3
  • TEX28 TEX28P1 TEX28P2 4
  • CXorf2 4
  • PTEX 3

External Ids for TEX28P1 Gene

Previous GeneCards Identifiers for TEX28P1 Gene

  • GC0XM153116
  • GC0XM153461
  • GC0XM142076

Summaries for TEX28P1 Gene

GeneCards Summary for TEX28P1 Gene

TEX28P1 (Testis Expressed 28 Pseudogene 1) is a Pseudogene. Diseases associated with TEX28P1 include blue cone monochromacy and achromatopsia.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX28P1 Gene

Genomics for TEX28P1 Gene

Genomic Location for TEX28P1 Gene

Chromosome:
X
Start:
154,196,321 bp from pter
End:
154,217,295 bp from pter
Size:
20,975 bases
Orientation:
Minus strand

Genomic View for TEX28P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TEX28P1 Gene

No data available for Regulatory Elements for TEX28P1 Gene

Proteins for TEX28P1 Gene

  • Protein details for TEX28P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O15482-TEX28_HUMAN
    Recommended name:
    Testis-specific protein TEX28
    Protein Accession:
    O15482
    Secondary Accessions:
    • B1B1E8
    • D3DWW5

    Protein attributes for TEX28P1 Gene

    Size:
    410 amino acids
    Molecular mass:
    46131 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX28P1 Gene

Proteomics data for TEX28P1 Gene at MOPED

Post-translational modifications for TEX28P1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TEX28P1 Gene

Domains & Families for TEX28P1 Gene

Protein Domains for TEX28P1 Gene

Graphical View of Domain Structure for InterPro Entry

O15482

UniProtKB/Swiss-Prot:

TEX28_HUMAN :
  • Belongs to the TEX28 family.
Family:
  • Belongs to the TEX28 family.
genes like me logo Genes that share domains with TEX28P1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TEX28P1 Gene

Function for TEX28P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX28P1 Gene

Localization for TEX28P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TEX28P1 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TEX28P1 Gene COMPARTMENTS Subcellular localization image for TEX28P1 gene
Compartment Confidence
endoplasmic reticulum 2
vacuole 2

No data available for Gene Ontology (GO) - Cellular Components for TEX28P1 Gene

Pathways & Interactions for TEX28P1 Gene

SuperPathways for TEX28P1 Gene

No Data Available

Interacting Proteins for TEX28P1 Gene

Selected Interacting proteins: O15482-TEX28_HUMAN for TEX28P1 Gene via MINT I2D

Symbol External ID(s) Details
EPS8

Gene Ontology (GO) - Biological Process for TEX28P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX28P1 Gene

Drugs & Compounds for TEX28P1 Gene

No Compound Related Data Available

Transcripts for TEX28P1 Gene

mRNA/cDNA for TEX28P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEX28P1 Gene

No ASD Table

Relevant External Links for TEX28P1 Gene

GeneLoc Exon Structure for
TEX28P1
ECgene alternative splicing isoforms for
TEX28P1

Expression for TEX28P1 Gene

mRNA expression in normal human tissues for TEX28P1 Gene

mRNA differential expression in normal tissues according to GTEx for TEX28P1 Gene

This gene is overexpressed in Testis (x51.1).

Protein differential expression in normal tissues from HIPED for TEX28P1 Gene

This gene is overexpressed in Serum (46.1), Amniocyte (13.6), and Plasma (8.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TEX28P1 Gene



mRNA Expression by UniProt/SwissProt for TEX28P1 Gene

O15482-TEX28_HUMAN
Tissue specificity: Testis specific
genes like me logo Genes that share expression patterns with TEX28P1: view

Protein tissue co-expression partners for TEX28P1 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for TEX28P1 Gene

Orthologs for TEX28P1 Gene

Evolution for TEX28P1 Gene

ENSEMBL:
Gene Tree for TEX28P1 (if available)
TreeFam:
Gene Tree for TEX28P1 (if available)

No data available for Orthologs for TEX28P1 Gene

Paralogs for TEX28P1 Gene

(1) SIMAP similar genes for TEX28P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TEX28P1: view

No data available for Paralogs for TEX28P1 Gene

Variants for TEX28P1 Gene

Relevant External Links for TEX28P1 Gene

HapMap Linkage Disequilibrium report
TEX28P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX28P1 Gene

Disorders for TEX28P1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for TEX28P1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
blue cone monochromacy
  • blue cone monochromatism
achromatopsia
  • achm
parasitic protozoa infectious disease
  • mastigophora infectious disease
- elite association
genes like me logo Genes that share disorders with TEX28P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for TEX28P1 Gene

Publications for TEX28P1 Gene

  1. An insertion/deletion TEX28 polymorphism and its application to analysis of red/green visual pigment gene arrays. (PMID: 15378397) Ueyama H. … Yamade S. (J. Hum. Genet. 2004) 2 67
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 67
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
  4. Identification of a gene within the tandem array of red and green color pigment genes. (PMID: 9268643) Hanna M.C. … Kirkness E.F. (Genomics 1997) 67

Products for TEX28P1 Gene

Sources for TEX28P1 Gene

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