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Aliases for TEX261 Gene

Aliases for TEX261 Gene

  • Testis Expressed 261 2 3 5
  • Testis Expressed Sequence 261 2 3
  • Protein TEX261 3
  • TEG-261 3

External Ids for TEX261 Gene

Previous GeneCards Identifiers for TEX261 Gene

  • GC02M071126
  • GC02M071187
  • GC02M071124
  • GC02M071174
  • GC02M070949
  • GC02M071215
  • GC02M071216
  • GC02M071217
  • GC02M071218
  • GC02M071221

Summaries for TEX261 Gene

GeneCards Summary for TEX261 Gene

TEX261 (Testis Expressed 261) is a Protein Coding gene. GO annotations related to this gene include COPII adaptor activity. An important paralog of this gene is ENSG00000258881.

Additional gene information for TEX261 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX261 Gene

Genomics for TEX261 Gene

Regulatory Elements for TEX261 Gene

Enhancers for TEX261 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H070080 1.4 ENCODE dbSUPER 30.6 +908.6 908554 11 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 MEF2D SSRP1 RCOR2 TIA1 PCBP1-AS1 TEX261 ANKRD53 GMCL1 C2orf42 CLEC4F MXD1 SNRNP27 NAGK
GH02H070139 1.7 Ensembl ENCODE dbSUPER 23.9 +853.1 853080 5 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC PPARGC1A TIA1 TEX261 ANKRD53 MPHOSPH10 PCBP1-AS1 FAM136A ASPRV1 PCYOX1 LINC01816 GC02P070210
GH02H070246 1.1 ENCODE 32.3 +746.7 746685 3 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 TEX261 PCBP1-AS1 CLEC4F GMCL1 ANKRD53 MPHOSPH10 CD207 TIA1 NAGK C2orf42
GH02H071000 1.6 FANTOM5 Ensembl ENCODE 17.1 -6.9 -6865 2 HDGF MLX ARID4B DMAP1 ZNF2 GLIS2 CBX5 ELK1 ZNF143 RUNX3 TEX261 ANKRD53 NAGK ENSG00000258881 OR7E91P
GH02H071226 1 ENCODE 24.1 -232.0 -232037 1 HDGF PKNOX1 ATF1 FOXA2 SIN3A FEZF1 GLI4 ZNF2 ZBTB7B YY1 TEX261 ANKRD53 MPHOSPH10 TIA1 PAIP2B ENSG00000233870
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TEX261 on UCSC Golden Path with GeneCards custom track

Promoters for TEX261 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000118746 -55 1601 FOXA2 ZFP64 ARID4B SIN3A YY1 ETS1 GLIS2 ZNF143 ATF7 RUNX3

Genomic Location for TEX261 Gene

Chromosome:
2
Start:
70,985,938 bp from pter
End:
70,994,945 bp from pter
Size:
9,008 bases
Orientation:
Minus strand

Genomic View for TEX261 Gene

Genes around TEX261 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX261 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX261 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX261 Gene

Proteins for TEX261 Gene

  • Protein details for TEX261 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UWH6-TX261_HUMAN
    Recommended name:
    Protein TEX261
    Protein Accession:
    Q6UWH6
    Secondary Accessions:
    • A1A587
    • D6W5G9
    • Q8WUJ5

    Protein attributes for TEX261 Gene

    Size:
    196 amino acids
    Molecular mass:
    22538 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX261 Gene

Post-translational modifications for TEX261 Gene

No Post-translational modifications

Other Protein References for TEX261 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TEX261 Gene

Domains & Families for TEX261 Gene

Gene Families for TEX261 Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins

Protein Domains for TEX261 Gene

Suggested Antigen Peptide Sequences for TEX261 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6UWH6

UniProtKB/Swiss-Prot:

TX261_HUMAN :
  • Belongs to the SVP26 family.
Family:
  • Belongs to the SVP26 family.
genes like me logo Genes that share domains with TEX261: view

Function for TEX261 Gene

Phenotypes From GWAS Catalog for TEX261 Gene

Gene Ontology (GO) - Molecular Function for TEX261 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0097020 COPII adaptor activity IBA --
genes like me logo Genes that share ontologies with TEX261: view
genes like me logo Genes that share phenotypes with TEX261: view

Animal Model Products

CRISPR Products

miRNA for TEX261 Gene

miRTarBase miRNAs that target TEX261

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for TEX261
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TEX261 Gene

Localization for TEX261 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TEX261 Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TEX261 gene
Compartment Confidence
plasma membrane 3
endoplasmic reticulum 3
golgi apparatus 3
nucleus 2
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for TEX261 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0030134 ER to Golgi transport vesicle IBA --
GO:0030173 integral component of Golgi membrane IBA --
GO:0030176 integral component of endoplasmic reticulum membrane IBA --
genes like me logo Genes that share ontologies with TEX261: view

Pathways & Interactions for TEX261 Gene

SuperPathways for TEX261 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TEX261 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006888 ER to Golgi vesicle-mediated transport IBA --
genes like me logo Genes that share ontologies with TEX261: view

No data available for Pathways by source and SIGNOR curated interactions for TEX261 Gene

Drugs & Compounds for TEX261 Gene

No Compound Related Data Available

Transcripts for TEX261 Gene

Unigene Clusters for TEX261 Gene

Testis expressed 261:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for TEX261
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TEX261 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6a · 6b · 6c
SP1: - - -
SP2: - -
SP3: -
SP4:

Relevant External Links for TEX261 Gene

GeneLoc Exon Structure for
TEX261
ECgene alternative splicing isoforms for
TEX261

Expression for TEX261 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TEX261 Gene

Protein differential expression in normal tissues from HIPED for TEX261 Gene

This gene is overexpressed in Ovary (36.0), Prostate (24.0), and Liver (9.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for TEX261 Gene



Protein tissue co-expression partners for TEX261 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of TEX261 Gene:

TEX261

SOURCE GeneReport for Unigene cluster for TEX261 Gene:

Hs.516087

Evidence on tissue expression from TISSUES for TEX261 Gene

  • Nervous system(4)
  • Lung(2.1)
genes like me logo Genes that share expression patterns with TEX261: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX261 Gene

Orthologs for TEX261 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TEX261 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX261 33 34
  • 99.83 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 94 (a)
OneToMany
cow
(Bos Taurus)
Mammalia TEX261 33 34
  • 93.45 (n)
dog
(Canis familiaris)
Mammalia TEX261 33
  • 92.95 (n)
-- 34
  • 89 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Tex261 33 16 34
  • 91.5 (n)
rat
(Rattus norvegicus)
Mammalia Tex261 33
  • 91.5 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 76 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 80 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia tex261 33
  • 77.38 (n)
Str.2834 33
African clawed frog
(Xenopus laevis)
Amphibia tex261-prov 33
zebrafish
(Danio rerio)
Actinopterygii tex261 33 34
  • 76.19 (n)
wufb72a06 33
fruit fly
(Drosophila melanogaster)
Insecta CG3500 33 34
  • 56.89 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP011456 33
  • 54.39 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AFR127W 33
  • 49.81 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SVP26 33 34 36
  • 49.8 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0A09295g 33
  • 48.25 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 57 (a)
OneToMany
bread mold
(Neurospora crassa)
Ascomycetes NCU00778 33
  • 53.76 (n)
Species where no ortholog for TEX261 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TEX261 Gene

ENSEMBL:
Gene Tree for TEX261 (if available)
TreeFam:
Gene Tree for TEX261 (if available)

Paralogs for TEX261 Gene

Paralogs for TEX261 Gene

genes like me logo Genes that share paralogs with TEX261: view

Variants for TEX261 Gene

Sequence variations from dbSNP and Humsavar for TEX261 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000116130 -- 70,986,052(+) GTCTA(C/T)TGGGG upstream-variant-2KB, utr-variant-3-prime
rs1000188860 -- 70,985,812(+) TCAGG(A/G)AGGCA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1000270866 -- 70,992,923(+) TACAG(C/T)TGTCA intron-variant
rs1000680628 -- 70,990,995(+) GCTCT(C/T)TCATA intron-variant
rs1000746407 -- 70,992,602(+) CACAT(A/G)CCTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX261 Gene

Variant ID Type Subtype PubMed ID
esv2666405 CNV deletion 23128226
esv27910 CNV gain 19812545
esv3591215 CNV loss 21293372
nsv1013232 CNV gain 25217958
nsv1146915 OTHER inversion 26484159
nsv517881 CNV loss 19592680

Variation tolerance for TEX261 Gene

Residual Variation Intolerance Score: 45.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.03; 0.65% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TEX261 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX261

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TEX261 Gene

Disorders for TEX261 Gene

Relevant External Links for TEX261

Genetic Association Database (GAD)
TEX261
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TEX261

No disorders were found for TEX261 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX261 Gene

Publications for TEX261 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark HF … Gray A (Genome research 2003) 3 4 60
  3. Tex261, a novel gene presumably related but distinct from steroidogenic acute regulatory (StAR) gene, is regulated during the development of germ cells. (PMID: 9464256) López-Fernández LA … del Mazo J (Biochemical and biophysical research communications 1998) 2 3 60
  4. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  5. Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries. (PMID: 16303743) Otsuki T … Isogai T (DNA research : an international journal for rapid publication of reports on genes and genomes 2005) 3 60

Products for TEX261 Gene

Sources for TEX261 Gene

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