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Aliases for TEX26-AS1 Gene

Subcategory (RNA class) for TEX26-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TEX26-AS1 Gene

  • TEX26 Antisense RNA 1 2 3 5
  • Long Intergenic Non-Protein Coding RNA 447 2 3
  • TEX26 Antisense RNA 1 (Non-Protein Coding) 2 3
  • LINC00447 3

External Ids for TEX26-AS1 Gene

Previous HGNC Symbols for TEX26-AS1 Gene

  • LINC00447

Previous GeneCards Identifiers for TEX26-AS1 Gene

  • GC13M031457

Summaries for TEX26-AS1 Gene

GeneCards Summary for TEX26-AS1 Gene

TEX26-AS1 (TEX26 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX26-AS1 Gene

Genomics for TEX26-AS1 Gene

Regulatory Elements for TEX26-AS1 Gene

Enhancers for TEX26-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F030895 0.9 Ensembl ENCODE 10.7 +37.7 37735 1.8 JUND BHLHE40 FOS ZBTB40 MEDAG TEX26 TEX26-AS1 LINC00545
GH13F030862 1.4 FANTOM5 Ensembl ENCODE 10.7 +68.8 68835 5.3 PKNOX1 CREB3L1 ARID4B FEZF1 DMAP1 ZNF48 ZSCAN9 ZNF2 RAD21 RARA TEX26 MEDAG TEX26-AS1 RXFP2 LINC00545 PIR60604
GH13F030867 1.5 FANTOM5 Ensembl ENCODE 10.7 +62.4 62446 6.9 ATF1 INSM2 KLF17 ZNF2 ZEB1 GLIS2 FOS ZNF391 CREM ZNF280D TEX26 MEDAG TEX26-AS1 RXFP2 LINC00545 PIR60604
GH13F030885 0.2 ENCODE 10.5 +48.3 48298 0.1 TEX26 TEX26-AS1 LOC105370145 LINC00545 MEDAG
GH13F030879 1.1 Ensembl ENCODE 10.4 +52.4 52441 3.8 RFX1 JUND FOS ZNF48 RAD21 NR2F2 MEDAG TEX26 TEX26-AS1 LOC105370145 LINC00545 PIR60604
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TEX26-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TEX26-AS1 Gene

30,881,933 bp from pter
30,933,846 bp from pter
51,914 bases
Minus strand

Genomic View for TEX26-AS1 Gene

Genes around TEX26-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX26-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX26-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX26-AS1 Gene

Proteins for TEX26-AS1 Gene

Post-translational modifications for TEX26-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TEX26-AS1 Gene

Domains & Families for TEX26-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEX26-AS1 Gene

Function for TEX26-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX26-AS1 Gene

Localization for TEX26-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TEX26-AS1 Gene

Pathways & Interactions for TEX26-AS1 Gene

SuperPathways for TEX26-AS1 Gene

No Data Available

Interacting Proteins for TEX26-AS1 Gene

Gene Ontology (GO) - Biological Process for TEX26-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TEX26-AS1 Gene

Transcripts for TEX26-AS1 Gene

mRNA/cDNA for TEX26-AS1 Gene

(4) Additional mRNA sequences :
(17) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX26-AS1 Gene

TEX26 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TEX26-AS1 Gene

No ASD Table

Relevant External Links for TEX26-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TEX26-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TEX26-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TEX26-AS1 Gene

This gene is overexpressed in Testis (x13.8), Adipose - Visceral (Omentum) (x5.0), and Artery - Aorta (x4.1).

SOURCE GeneReport for Unigene cluster for TEX26-AS1 Gene:

genes like me logo Genes that share expression patterns with TEX26-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TEX26-AS1 Gene

Orthologs for TEX26-AS1 Gene

Evolution for TEX26-AS1 Gene

Gene Tree for TEX26-AS1 (if available)
Gene Tree for TEX26-AS1 (if available)

No data available for Orthologs for TEX26-AS1 Gene

Paralogs for TEX26-AS1 Gene

No data available for Paralogs for TEX26-AS1 Gene

Variants for TEX26-AS1 Gene

Sequence variations from dbSNP and Humsavar for TEX26-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1002036 -- 30,933,590(-) GGGAG(A/C)ACAAT intron-variant, upstream-variant-2KB
rs1014762 -- 30,894,752(+) CCAAC(A/G)TGGTG intron-variant
rs10219997 -- 30,893,083(+) TGTCA(A/G)TGGCA intron-variant
rs1029457 -- 30,895,083(+) AATAC(A/G)GTACC intron-variant
rs10492601 -- 30,919,833(-) TTAAT(G/T)ACTCA intron-variant

Relevant External Links for TEX26-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX26-AS1 Gene

Disorders for TEX26-AS1 Gene

Relevant External Links for TEX26-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TEX26-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX26-AS1 Gene

Publications for TEX26-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for TEX26-AS1 Gene

Sources for TEX26-AS1 Gene

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