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Aliases for TEX26 Gene

Aliases for TEX26 Gene

  • Testis Expressed 26 2 3 5
  • C13orf26 3 4
  • Testis-Expressed Sequence 26 Protein 3
  • Chromosome 13 Open Reading Frame 26 2
  • Testis-Expressed Protein 26 3

External Ids for TEX26 Gene

Previous HGNC Symbols for TEX26 Gene

  • C13orf26

Previous GeneCards Identifiers for TEX26 Gene

  • GC13P031507

Summaries for TEX26 Gene

GeneCards Summary for TEX26 Gene

TEX26 (Testis Expressed 26) is a Protein Coding gene.

Additional gene information for TEX26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX26 Gene

Genomics for TEX26 Gene

Regulatory Elements for TEX26 Gene

Enhancers for TEX26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H030862 1.8 FANTOM5 Ensembl ENCODE dbSUPER 16.4 -67.7 -67673 5 PKNOX1 ATF1 ARID4B FEZF1 DMAP1 ZNF2 YY1 ZNF143 FOS ATF7 TEX26 MEDAG TEX26-AS1 RXFP2 LINC00545 PIR60604
GH13H030867 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.1 -61.3 -61284 6 HDGF ATF1 INSM2 KLF17 RAD21 ZNF2 ZEB1 GLIS2 FOS ATF7 TEX26 MEDAG TEX26-AS1 RXFP2 LINC00545 PIR60604
GH13H030977 1 Ensembl ENCODE 11.8 +45.5 45493 1 CTCF ESRRA JUN INSM2 KLF17 ZNF384 EBF1 RAD21 THRB FOSL1 TEX26 MEDAG LOC105370145 LINC01066
GH13H030895 1.1 Ensembl ENCODE dbSUPER 10.7 -36.6 -36573 1 JUND FOS ZNF24 RAD21 ZFX ZBTB40 MEDAG TEX26-AS1 TEX26 LINC00545
GH13H030879 1 Ensembl ENCODE dbSUPER 10.5 -51.3 -51279 3 JUND CHD1 FOS RAD21 NR2F2 MEDAG TEX26 TEX26-AS1 LOC105370145 LINC00545 PIR60604
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TEX26 on UCSC Golden Path with GeneCards custom track

Genomic Location for TEX26 Gene

Chromosome:
13
Start:
30,932,684 bp from pter
End:
30,975,502 bp from pter
Size:
42,819 bases
Orientation:
Plus strand

Genomic View for TEX26 Gene

Genes around TEX26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX26 Gene

Proteins for TEX26 Gene

  • Protein details for TEX26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N6G2-TEX26_HUMAN
    Recommended name:
    Testis-expressed protein 26
    Protein Accession:
    Q8N6G2

    Protein attributes for TEX26 Gene

    Size:
    289 amino acids
    Molecular mass:
    33595 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX26 Gene

Post-translational modifications for TEX26 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TEX26 Gene

Domains & Families for TEX26 Gene

Gene Families for TEX26 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for TEX26 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TEX26: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEX26 Gene

Function for TEX26 Gene

Phenotypes From GWAS Catalog for TEX26 Gene

Phenotypes for TEX26 Gene

GenomeRNAi human phenotypes for TEX26:
genes like me logo Genes that share phenotypes with TEX26: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for TEX26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX26 Gene

Localization for TEX26 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TEX26 gene
Compartment Confidence
nucleus 2
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEX26 Gene

Pathways & Interactions for TEX26 Gene

SuperPathways for TEX26 Gene

No Data Available

Interacting Proteins for TEX26 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000369840%0d%0a9606.ENSP00000381844%0d%0a
Selected Interacting proteins: ENSP00000369840 for TEX26 Gene via STRING

Symbol External ID(s) Details
ATL3

Gene Ontology (GO) - Biological Process for TEX26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX26 Gene

Drugs & Compounds for TEX26 Gene

No Compound Related Data Available

Transcripts for TEX26 Gene

mRNA/cDNA for TEX26 Gene

Unigene Clusters for TEX26 Gene

Testis expressed 26:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for TEX26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TEX26 Gene

No ASD Table

Relevant External Links for TEX26 Gene

GeneLoc Exon Structure for
TEX26
ECgene alternative splicing isoforms for
TEX26

Expression for TEX26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TEX26 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for TEX26 Gene

This gene is overexpressed in Testis (x25.3) and Brain - Hypothalamus (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of TEX26 Gene:

TEX26

SOURCE GeneReport for Unigene cluster for TEX26 Gene:

Hs.124463
genes like me logo Genes that share expression patterns with TEX26: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX26 Gene

Orthologs for TEX26 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TEX26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX26 33 34
  • 98.73 (n)
dog
(Canis familiaris)
Mammalia TEX26 33 34
  • 82.52 (n)
cow
(Bos Taurus)
Mammalia TEX26 33
  • 78.09 (n)
C12H13ORF26 34
  • 68 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tex26 33 16 34
  • 73.26 (n)
rat
(Rattus norvegicus)
Mammalia Tex26 33
  • 73.16 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia TEX26 34
  • 39 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TEX26 34
  • 29 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tex26 33
  • 53.71 (n)
zebrafish
(Danio rerio)
Actinopterygii tex26 34
  • 26 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 26 (a)
OneToOne
Species where no ortholog for TEX26 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TEX26 Gene

ENSEMBL:
Gene Tree for TEX26 (if available)
TreeFam:
Gene Tree for TEX26 (if available)

Paralogs for TEX26 Gene

No data available for Paralogs for TEX26 Gene

Variants for TEX26 Gene

Sequence variations from dbSNP and Humsavar for TEX26 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000009977 -- 30,957,401(+) CAAGG(A/G)CAAAG intron-variant
rs1000076530 -- 30,956,351(+) CATCA(C/T)TTTTT intron-variant
rs1000124541 -- 30,952,261(+) CATTA(A/T)GGGCT intron-variant
rs1000136541 -- 30,968,803(+) GTCAG(A/G)GTCAT intron-variant
rs1000196317 -- 30,975,456(+) CAATT(C/T)TGAAA intron-variant, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for TEX26 Gene

Variant ID Type Subtype PubMed ID
esv2657443 CNV deletion 23128226
esv2663266 CNV deletion 23128226
esv2747235 CNV deletion 23290073
esv2759929 CNV loss 17122850
esv3631682 CNV loss 21293372
esv3631683 CNV loss 21293372
nsv9063 CNV loss 18304495

Variation tolerance for TEX26 Gene

Residual Variation Intolerance Score: 90.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.49; 88.77% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TEX26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TEX26 Gene

Disorders for TEX26 Gene

Relevant External Links for TEX26

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TEX26

No disorders were found for TEX26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX26 Gene

Publications for TEX26 Gene

  1. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 3 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 60
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P … Vidal M (Genomics 2007) 3 60

Products for TEX26 Gene

Sources for TEX26 Gene

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