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Aliases for TEX22 Gene

Aliases for TEX22 Gene

  • Testis Expressed 22 2 3

External Ids for TEX22 Gene

Previous GeneCards Identifiers for TEX22 Gene

  • GC14P105865

Summaries for TEX22 Gene

GeneCards Summary for TEX22 Gene

TEX22 (Testis Expressed 22) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX22 Gene

Genomics for TEX22 Gene

Genomic Location for TEX22 Gene

Start:
105,398,579 bp from pter
End:
105,450,106 bp from pter
Size:
51,528 bases
Orientation:
Plus strand

Genomic View for TEX22 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TEX22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX22 Gene

No data available for Regulatory Elements for TEX22 Gene

Proteins for TEX22 Gene

  • Protein details for TEX22 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9J3V5-TEX22_HUMAN
    Recommended name:
    Testis-expressed sequence 22 protein
    Protein Accession:
    C9J3V5
    Secondary Accessions:

    Protein attributes for TEX22 Gene

    Size:
    150 amino acids
    Molecular mass:
    16880 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX22 Gene

Proteomics data for TEX22 Gene at MOPED

Post-translational modifications for TEX22 Gene

No Post-translational modifications

Other Protein References for TEX22 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TEX22 Gene

Domains for TEX22 Gene

Protein Domains for TEX22 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TEX22 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TEX22: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TEX22 Gene

Function for TEX22 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TEX22 Gene

Localization for TEX22 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TEX22 Gene

Cytoplasm. Cytoplasmic vesicle, secretory vesicle, acrosome.

Gene Ontology (GO) - Cellular Components for TEX22 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001669 acrosomal vesicle IEA --
GO:0005737 cytoplasm --
genes like me logo Genes that share ontologies with TEX22: view

No data available for Subcellular locations from COMPARTMENTS for TEX22 Gene

Pathways for TEX22 Gene

SuperPathways for TEX22 Gene

No Data Available

Interacting Proteins for TEX22 Gene

Gene Ontology (GO) - Biological Process for TEX22 Gene

None

No data available for Pathways by source for TEX22 Gene

Transcripts for TEX22 Gene

mRNA/cDNA for TEX22 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX22 Gene

Testis expressed 22:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TEX22 Gene

No ASD Table

Relevant External Links for TEX22 Gene

GeneLoc Exon Structure for
TEX22
ECgene alternative splicing isoforms for
TEX22

Expression for TEX22 Gene

mRNA expression in normal human tissues for TEX22 Gene

mRNA differential expression in normal tissues according to GTEx for TEX22 Gene

This gene is overexpressed in Testis (15.1).

SOURCE GeneReport for Unigene cluster for TEX22 Gene Hs.729499

genes like me logo Genes that share expressions with TEX22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TEX22 Gene

Orthologs for TEX22 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TEX22 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX22 36
  • 81 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TEX22 35
  • 76.51 (n)
  • 63.09 (a)
dog
(Canis familiaris)
Mammalia LOC100855864 35
  • 79.68 (n)
  • 69.52 (a)
TEX22 36
  • 67 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tex22 35
  • 68.93 (n)
  • 54.42 (a)
Tex22 16
Tex22 36
  • 43 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tex22 35
  • 69.63 (n)
  • 56.16 (a)
Species with no ortholog for TEX22:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TEX22 Gene

ENSEMBL:
Gene Tree for TEX22 (if available)
TreeFam:
Gene Tree for TEX22 (if available)

Paralogs for TEX22 Gene

Pseudogenes.org Pseudogenes for TEX22 Gene

genes like me logo Genes that share paralogs with TEX22: view

No data available for Paralogs for TEX22 Gene

Variants for TEX22 Gene

Sequence variations from dbSNP and Humsavar for TEX22 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs4983406 -- 105,401,087(+) AATGC(A/T)GAATT intron-variant
rs4983611 -- 105,404,312(+) gagtg(A/T)gtgga intron-variant
rs4983612 -- 105,404,313(+) agtga(G/T)tggag intron-variant
rs6576085 -- 105,406,625(+) TGTAT(C/G)TTTAA intron-variant
rs6576086 -- 105,406,807(+) GCCCA(C/T)TGTGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX22 Gene

Variant ID Type Subtype PubMed ID
dgv2020n71 CNV Loss 21882294
nsv902424 CNV Loss 21882294
dgv659e1 CNV Complex 17122850
nsv470679 CNV Loss 18288195
nsv902441 CNV Loss 21882294
dgv2024n71 CNV Loss 21882294
dgv2025n71 CNV Loss 21882294
nsv517055 CNV Gain+Loss 19592680
nsv832889 CNV Loss 17160897
dgv2032n71 CNV Loss 21882294
dgv2033n71 CNV Loss 21882294
dgv2034n71 CNV Loss 21882294
nsv902473 CNV Loss 21882294
nsv832890 CNV Loss 17160897
nsv902477 CNV Loss 21882294
nsv817647 CNV Gain 17921354
dgv2035n71 CNV Loss 21882294
nsv902480 CNV Loss 21882294
nsv902481 CNV Loss 21882294

Relevant External Links for TEX22 Gene

HapMap Linkage Disequilibrium report
TEX22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TEX22 Gene

Disorders for TEX22 Gene

No disorders were found for TEX22 Gene.

No data available for UniProtKB/Swiss-Prot for TEX22 Gene

Publications for TEX22 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R. … Weissenbach J. (Nature 2003) 4

Products for TEX22 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate TEX22
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat
  • Predesigned siRNA for gene silencing in human,mouse,rat for TEX22
  • Block miRNA regulation of TEX22 using miScript Target Protectors

Sources for TEX22 Gene

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